Hippoglossus hippoglossus (Atlantic halibut): 117752407
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Entry
117752407 CDS
T07778
Symbol
myo1d
Name
(RefSeq) unconventional myosin-Id
KO
K10356
myosin I
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117752407 (myo1d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hhip01009
]
117752407 (myo1d)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117752407 (myo1d)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117752407 (myo1d)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117752407 (myo1d)
04147 Exosome [BR:
hhip04147
]
117752407 (myo1d)
Protein phosphatases and associated proteins [BR:
hhip01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117752407 (myo1d)
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Phagocytosis
Others
117752407 (myo1d)
Others
Actin-binding proteins
Myosins
117752407 (myo1d)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
117752407 (myo1d)
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117752407 (myo1d)
Exosome [BR:
hhip04147
]
Exosomal proteins
Proteins found in most exosomes
117752407 (myo1d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
nSTAND3
Sigma54_activat
Zeta_toxin
AAA_22
AAA_16
NPHP3_N
AAA_18
TsaE
Motif
Other DBs
NCBI-GeneID:
117752407
NCBI-ProteinID:
XP_034425551
LinkDB
All DBs
Position
19:2449554..2517765
Genome browser
AA seq
1004 aa
AA seq
DB search
MAEHESLEFGKADFVLLDNVSMEEFMANLKLRFEKGRIYSYIGEVVVSVNPYRAMNIYGR
DTVEQYKGRELYERPPHLFAIADAAYKAMKRRNKDTCIVISGESGAGKTEASKYIMQYIA
AITNPNQRAEVERVKNMLLKSNCVLEAFGNAKTSRNDNSSRFGKYMDINFDFKGDPIGGH
INNYLLEKSRVIFQQEGERSFHSFYQLLRGSPDSLLRSLHVQKDPTAYNYIKVGGQIKSS
INDGADLKAVADAMKVIGFTGDEIQTVYKILATILHLGNMTFGVDGDVTLIENPKLVSVI
RELLSTKEENVEKALLYRTVATGRDVIEKQHTAQEAGYGRDALAKAMYERLFCWIVGRIN
DVIEVKNYDARVHGKNTVIGVLDIYGFEIFQNNSFEQFCINYCNEKLQQLFIQLVLKQEQ
EEYQREGIPWKHIDYFNNQIIVDLVEQQHKGIFSVLDEACMNVGKVTDEVFLQGLNGKLG
KHAHYTSRKLSPTDKSLEFDRDFRIRHYAGDVMYSVVGFIDKNKDTLFQDFKRLLYNSSN
PVLKGMWPEGKLSITEVTKRPLTAATLFKNSMIALVENLTCKEPYYVRCIKPNDVKSPLL
FEQERCRHQVEYLGLLENVRVRRAGFAYRQTYPRFLQRYKMISEFTWPNHDLPSDKEAVK
RLMQGCGFDHDVAYGKTKVFIRTPRTLFSLEEQRAEMLQRIVLFLQKVWRGTIARMRYRR
MRAALVILQAYRRYKVRSYIREVNRRFKNVRSMKDYGRHVKWPTPPKVLRKFEEALRSIY
NRWWAWTLIKGLSPEEALQVRAKVACLEALKGHRSDLGLQRAWEGNYLKRDSPDSAASFT
LVSSELQRKDKFMRVLFSCNVRKINRFHKSEDRTVLITDRHLYKMDPLKQYKPMKSIPLY
NVTGMSVSPGKDQLVVFHTKDSRDLVVCLQGMVPASESRIGELVGTLLSHFKSEKRKLQV
NVSSPIQCSMNGRKCTIIVEPKINQSQPDFTKSRSGYILAVPGN
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcacgagagcctggagttcgggaaagcggatttcgtgctgctggacaacgtg
tccatggaggagttcatggccaacctcaaactcaggttcgagaaggggaggatctactcg
tacatcggagaggtggtcgtgtccgtcaacccgtaccgtgccatgaacatctacggccgc
gacaccgtggagcagtacaagggccgcgagctgtacgagaggccgccgcacctcttcgcc
atcgccgacgcggcgtacaaagccatgaagaggcggaacaaggacacgtgcatcgtcatc
tcaggggaaagtggagccggaaagacggaagccagcaagtacatcatgcagtacatagct
gccatcactaatcccaaccagagggcggaggttgagagggtgaaaaacatgctgctcaaa
tccaactgcgtgttggaggccttcggcaacgccaagaccagccgcaacgacaactccagc
cgcttcggcaagtacatggacatcaactttgacttcaaaggggatcccatcggaggccac
atcaacaactacctgctggagaagtccagggtgattttccagcaggaaggagagaggagc
tttcactccttctatcagctgctcagaggatctccagactccttgctgcgctctctccac
gtccagaaagacccgaccgcctacaactacatcaaagtcggaggccagatcaagtcgagc
atcaacgacggcgctgatctcaaagctgtggccgacgccatgaaagtgatcggtttcaca
ggggacgagattcagaccgtgtacaagatcctggccaccatcctacatctgggaaatatg
accttcggggtggacggagacgtgaccttgatcgagaacccgaagctggtgtctgtgatc
agggagctgctgtccaccaaggaggagaacgtggagaaggccctgctgtaccgcaccgtg
gccacggggcgagacgtcatcgagaagcagcacacggcgcaggaggccggctacggacgg
gacgctctggccaaggccatgtacgagcgtctgttctgctggatcgtcggacgaatcaat
gacgtgatcgaggtgaagaactacgacgccagagtccacgggaagaacacggtcatcggg
gtcctggacatctacggcttcgagattttccagaacaacagctttgaacagttctgcatc
aactactgcaacgagaagctgcagcagctgttcatccagctggtgctgaagcaggaacag
gaagagtatcaaagagaaggaatcccctggaaacatatcgattacttcaataaccagatc
atcgtcgacttggtggagcagcagcacaagggcatcttctccgtcctggacgaggcttgt
atgaacgtgggcaaagtcaccgacgaggttttcctccaaggcctcaacggcaaactcggc
aaacacgcccactacaccagtcgcaagctctcacccaccgacaagagtctggagttcgac
cgggactttcgtatcagacactacgcaggagacgtgatgtactctgtggtgggtttcatt
gacaagaacaaagacacactgttccaggatttcaagagactgctctacaacagttctaac
ccggtgctgaaggggatgtggcccgagggcaaactgagcatcaccgaggtcaccaaacgg
ccgctcaccgccgccacgctcttcaaaaactccatgatcgctctggtggagaacctgacg
tgcaaggagccctactacgtccgctgcatcaagcccaacgacgttaagtccccgctgctg
ttcgagcaggagcgctgccgccaccaggtggagtacctcggcctgctggagaacgtcagg
gtgcggcgcgccggcttcgcctaccgacagacgtaccctcgcttcctgcagagatacaag
atgatctcagagttcacgtggccgaaccacgacttgccatcggacaaagaggccgtgaag
aggctcatgcagggctgcgggtttgaccacgacgtcgcctacggcaaaaccaaggtcttc
atccgcacgccgcgcaccctcttcagcctcgaggagcagcgagccgagatgctccaaaga
atcgtcctcttcctccagaaggtgtggaggggcaccatagcccggatgcgttaccggcgg
atgcgagcggccctcgtcatccttcaggcttaccgccgctacaaggtcaggtcctacatc
cgcgaggtcaaccgtcgcttcaagaacgtccgatccatgaaggactacggccgacacgtc
aagtggccgacgccgccgaaagtcctgcgcaagttcgaggaggcgctcaggagcatctac
aacaggtggtgggcatggaccctgatcaaaggcctttctccagaggaggccctgcaggtg
agggccaaggtcgcctgtctggaggccctgaagggccacaggagcgacttgggcctgcaa
agagcctgggaaggaaactatctgaagcgagacagccccgacagcgccgcgtcgttcacg
ctcgtctccagcgagctgcagcggaaagacaaattcatgagggtgctgttctcctgcaat
gttcgcaagatcaaccgtttccacaagtcggaggacaggactgtgctcatcactgaccgc
cacctgtacaagatggatcccctgaagcagtacaagcccatgaagagcatccccctctac
aacgtgacggggatgagcgtgtccccggggaaggaccagctggtcgtcttccacactaag
gacagcagggacctggtggtgtgcctgcagggaatggtccccgccagcgagagccgcatc
ggggagctggtgggcaccttgctcagccacttcaagagcgagaagaggaagctgcaggtg
aacgtctccagtcccatccagtgcagcatgaacggcaggaagtgcaccatcatcgtggaa
cccaagatcaaccagtcacagccggacttcaccaagagccgctcaggttacatcctggct
gttcccggcaactga
DBGET
integrated database retrieval system
