Hippoglossus hippoglossus (Atlantic halibut): 117752445
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Entry
117752445 CDS
T07778
Symbol
jmjd1cb
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117752445 (jmjd1cb)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
117752445 (jmjd1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
117752445
NCBI-ProteinID:
XP_034425636
LinkDB
All DBs
Position
19:complement(18428842..18539678)
Genome browser
AA seq
2940 aa
AA seq
DB search
MAVEARPELVGKRFLCVSGDDPPEIGDIGRWPWRSGVIRAVNHRDSDNPDLTVYVEFDDQ
EWEKREWVKVYEDFQLFLLEHQLVWAKRKEGAGGVGAGGGAGGLLQATKAKHIQWPALAF
KPVVGKSLLSSVTAVEFLLDQQLDFLSDHSTYQPYQDEVDSQNPVLRDNHQLHEEVKAWL
KDQKVQEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMVVMNDQVLEPQNV
DPSMIQMTFLDDVVHSLLKGENIGITSRRRSRSSQNNNSAHMTGGRPGGTTGNNQSHYTR
AQANSPRPVMNSSGPNPKVSQGTLASQQHSQSQQSQQPASQSNHSPGGSAREQREQRNSR
SSRRKGSDSSVPEEDKDRREETTGRDSKSKVKQAVSKRRKGEEDEKKAGLKRLKTDMTSD
LSESSDSENPHNKRTAHSSCSSSSSSSSSSSSSSSSSSSEPNSENELKTRSSDVKPSAVS
KMEEDEKPLIQGAKINNSSSLIGRLSPWVELQAPDESKKGVLKETGKIVMKEVEELVAVT
QITQSPRQQCVMPETIQVGIVESSKNTVKASPRSQTPSSSNLQSSNVIDITDDAQATVHR
ESSEAVSALLASQKAESTALSPYLALNPSPVSSPPIPPSPSPSEGGRRTDVEPPMQQQQQ
QQGIMGNSLTAARTLGNKIEFAPSEVIRPVTSMAESVVLVEKEKTVLPHHHLHPHQQQQH
HQQHTQQHYPSIQPGIKSPSSEETRKHPQQQPNPHKMNTVPPSEIAKPKMSPSPNPSTPQ
LDSLKQKPQHPNNSQSHPYPNTNPTEHLKTRSHPGLLEISRPKPNTSPEVSKHKIPRYPD
TSPPPTGRLSAKLETAEPLRSCFKPVPARPESVGVCMSSSSSKSPLIIDKNETFTVYRDP
ALVRSDAENSVAASLSSNHVAAYLHPHLHTLHSPSPHPPCLTPASHPHATSHLLSASHTS
ALPHPHLLPPGVLSAMPPPTASLLGGHPRLDSPGGLGHLGLPHPSAAHQQQFLQSQGPPP
PHLLAQAHGGAAGLGLYPILWQYPNGTPTSYPPGLSLPPTAKWVHPENPVGVNSEASLRR
NTSSPWLHQAAGSTGDGLGMLSHIPVRPASADANRHSIKMNTHASPPLSKTSMDIHKEDL
DKKGYVDPIRTLTFAQLKQEQTDRSRTPTGKDVHLHRIYLDPLSKARLANTQDTAQAADR
ASKYKEENRQILKESIEVAPFTAKIQRCSDPGMDRDRDRDRDRERERERSRDSAFPVRIP
ALTSPSPKASHAHPHIIQSEKSNYFTTLSNSVVNEPPRLYSSKELSSYYEKLPVVAPGVV
ASIGAAVPSQGALSLGSHSSKISLSKPPPLIKHQPEGGEGLAGKITEQLSQQVTLVQQQH
QHHTGIERIERRSPAISPPSSSTLSSTAPNHHHHHHHHHQQQQQQQQQQHQLRAMPSLHR
APVFHPPTQHALERKEAAEREREREKEREKERERAGYGGRLSPPTLTPIQPVSLVATGSK
TSAEQQKPPTLLPELRDVKGHGNAAAITSVASVISGEIMTPSTDGWRVGEMIQERGVYPG
EKGMSRGKPQAAMASVIVRPSTSIKYDSLIGANKSGGVIHQDLPHGRFYPSKFQGECPRL
GESIRELGAGRVIQSNSNMDDMCVQYKRNSVCGMQGIMGGSTTNSLCRTVVSASSTFGIQ
NKSGAATHELGYSVSARDEITAHKTSIGGWVLGHSGPGEHQEGFISRTTSPGGSLPPPSP
AGTPQPSPSLTPTPSSIFGSGQPLSSSFVHLKKHKAALAAAQSRNNFSTALTSITTGNPS
LSVDSIDKARIHSSPPPPSSSQASSLSVDSSSSSSASGSTTPGKSSPLPNNQCSGSASTS
SGQSSNYHKLKKAWLTRHSEEDRNTTATTTSTSAKPEKLPSTTTTTITTITTTSTSNTSN
TTAMSEIIKPCTVNLSASTSSEVEMSKDIVSKGERERQAEEKMAAAAAGGGAGEERKPAP
LSRRGNKRSYESGSESGGDDSDTSESKMEGRAKRQPKPTYKKKQNDMAKRKGDNEKEEDD
VKPNGIFRSAREKTKLKLASSNGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQK
CRECRVIRSKKGEEQAHSPVFCRFYYFRRLSFSKNGVIRMDGFSAPDQFDDEALALWAPE
AIEENHLDQSTAKYILSFIGDKFCQIVVTENTAASWVKKDAKLAWKRAVRGVREMCDACE
ATLFNIHWVCQKCGFVVCLDCYKAKERRSSKDKELYGWLKCVKGQPHDHKHLMPTQIIPG
TVLTELVTSMHSMRDKHDIKSHCACTNKQNLLIKLPATNGVSQVLQNVLNHSNKLSLVKS
EPGSLQNSDPVGTKAETNGAGSPGSDTGSAPVTPPESQSPLHFLADLAEQKSREEKKENK
VSVLLGKSVKEDKAGESLEVLQQCKTTSLVTNNTEQGSTLRDLLTTTAGKLKLGSTDAGI
AFAPVYSTASQTGKSGRSMPNILDDIIASVVENKIPASRQNITKLSIKQEPVNAGCGGTN
NANPPAVTEDVKPERKKSVHVTATVPEDSTSQYPDIPHSWFNNRRLLWLKDHRNQNNWKL
FRECWKQGQPVLVSGIHKRLNAALWKADSFNQEFADHQGDLLNCKDQVVSNSGIKEFWDG
FEDITKRPKSKDGEPMVYRLKDWPSGEEFMALMPSRYDDLMKNLPLPEYSDPEGNLNLAS
HLPSFFVRPDLGPRLCCAYGVAASQDQDFGTANLHVEVSDVVSVLVYVGVAKGNGVLSKT
GVLKRLEEEDLDEGVRKRLKDSSETPGALWHIYLNRDMDKVREFLYKLCKEQGLEVSPDQ
DPIREHGWYLSRKQRQRLQDEHGVQGWTVVQFLGDSVLIPAGAMHQVQNLHSCVQVINDF
VSPEHVANSYHLTQELRPSKEEVNYEDKLQVKNILFHCVKEAVNSLKRSSSEEDNEEDNS
NT seq
8823 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgaggctcgcccggagctggtcgggaagcggttcctctgtgtcagcggggac
gacccgcctgaaatcggcgacatcggccggtggccgtggaggtccggggtcatacgagcc
gtcaaccatcgtgacagcgacaatcccgacctgacggtatatgtggagtttgatgatcag
gagtgggagaagagagagtgggtcaaggtctatgaggatttccagctgtttctactggag
caccagctggtctgggccaagaggaaggagggagcaggaggagtgggagcaggcggagga
gcaggaggcctgctgcaggcaaccaaggccaaacacatacagtggcctgccctggcattt
aagccagtggtggggaagagcctgttgtcgtcagtaacagcagtggaattcttgttagac
caacagctggacttcctgtcggaccattcaacttaccaaccataccaggatgaggtggac
agtcagaacccagtgttaagagacaaccatcagctccatgaagaagtgaaggcctggctc
aaagaccagaaggtgcaggaaattttcatgcaaggtccctattcgttgaatggttatcgt
gtccgtgtgtatagacaagactcagctacccaatggttcactggcatcattacacaccac
gacctctttagtcgaaatatggtcgttatgaatgaccaggtgctagagcctcagaacgtg
gatccatccatgatccagatgacctttctggatgacgtggtccactctctgctgaaagga
gaaaacatcggcatcacctccagacgaaggtcacgatccagtcagaacaacaactctgcc
catatgacaggagggagacctggtgggaccactggcaacaatcagagtcattatacgcga
gcccaagccaacagcccccgccccgttatgaactcatcaggccccaaccccaaagtttcc
caggggacattggcctcccagcagcacagccaatcacagcaaagccaacaaccagccagc
caatcaaaccactcacctggcggcagtgcacgggagcagagggagcagcgtaactctcgc
tcctccaggaggaaaggctcagacagcagcgttccagaggaagacaaggacaggagagag
gagacaactggcagagactccaagtccaaggtgaagcaggcggtgagcaaacgtaggaag
ggcgaggaggatgagaaaaaggcgggtttaaagagactgaagactgatatgacgtctgat
ctatcagagagtagtgactcagaaaacccacacaacaaaagaaccgcccactcctcatgc
tcctcttcctcctcatcgtcctcgtcatcctcttcgtcctcttcctcctcctcctcagag
ccaaactctgagaatgaacttaagactcgcagcagtgatgtaaaaccaagtgccgtttcc
aaaatggaggaagacgagaagccactaattcagggcgccaaaattaacaattcctcgtct
ctcatcggtcgcttgtctccatgggtggagcttcaagcaccagacgaaagcaagaagggt
gtgcttaaggaaacgggaaaaattgtaatgaaggaggtggaggaattggtagcggtaacg
cagatcacccagtctccccgacaacagtgtgtgatgcctgagaccatccaggttggcatc
gtggagagcagcaaaaacactgtgaaagcgtctcctcgatcccagaccccgtcctcatcc
aacctccagagcagcaatgtgatcgacatcacagatgatgcccaggccacggtgcaccgt
gagagctcagaggcagtgtcggcgctgctcgcctcgcagaaggccgagtccacggcccta
tcaccttacctcgccctcaacccctccccagtctcctcacctcctattccaccttctccc
tcaccatcagaaggaggccgccggaccgatgttgagcctcccatgcagcaacagcagcag
cagcaaggcattatgggaaatagcttaacagcagccaggactttaggaaataagatagag
tttgctccctctgaggttatcaggcctgtcacatcgatggctgagagtgtggtgctggtg
gagaaggagaaaactgtccttcctcatcatcatcttcatcctcatcaacaacagcagcat
catcagcagcacacacagcagcactacccatctatccaacctggcattaagagcccttca
tctgaagagactagaaaacatccacagcaacaaccaaacccccacaagatgaacacagtc
cccccctctgaaatagccaaacccaaaatgagtcctagccccaaccccagcacgcctcag
cttgactctctgaaacagaaaccccagcaccccaacaactctcagagccacccctatccc
aacactaacccaactgaacacctcaaaactaggtcccacccaggcctgctggagatctcc
agacctaaacccaacacctctccagaggtctccaaacacaaaataccaaggtaccctgat
acatcacctcctccgacaggccgtttgtccgctaaattagaaacagcagaacctctacgg
tcatgtttcaagccggtgccggcacggcccgagtcggttggggtctgtatgagcagcagc
agctccaagagtcctctgatcatcgataagaacgaaaccttcaccgtttacagggaccca
gcactggtccgctctgacgcagagaactctgttgccgcatcactctcttccaaccacgtg
gcagcctatctccatccccacctgcacaccctgcactccccgtccccccaccccccctgc
ctcacccctgcatcccacccccatgccacctcccacctcctttctgcttcgcacacctct
gccctacctcatccccaccttttaccccctggggtgctctcagccatgcctccgcccaca
gcatctctcctcgggggccacccacggctcgactcccctggtggtttgggtcacctcgga
ctacctcatccgtcagcggcacaccagcagcagttcctacagagtcagggcccccctcca
ccccatctactagcccaggctcacggaggggcagcagggctgggcctgtaccccatcctc
tggcagtaccccaatggaacaccaacctcctaccccccaggactcagcctgccccccaca
gctaagtgggtccaccctgaaaatcctgtcggcgtgaattctgaggcctctctcaggagg
aacacatccagtccgtggctgcaccaggctgctggtagcactggtgatggtctgggtatg
ctgagccacattcctgtcaggccagcaagtgctgacgcaaaccgccactccatcaagatg
aacacacacgcaagccctccactttcaaagaccagtatggatattcacaaagaagatttg
gataagaaaggctatgtggacccaatcaggactttgacgtttgcccagctgaaacaggag
cagacggacaggagtcgcacccccacagggaaagatgtccatttacaccgcatctaccta
gacccccttagcaaggctcgcctggcaaatacacaggatacagctcaggcagcagacaga
gccagtaagtacaaagaggagaatcggcaaatcctgaaagagagcattgaagtcgctccc
ttcactgctaagattcagcgctgcagtgaccctgggatggacagggacagagacagagac
agagacagagagagagagagagagagaagcagagattctgccttccctgtccgaatacca
gctctcacctcccccagccccaaggccagccacgcccatccccacatcatccaatcagaa
aagagcaactatttcaccacactgtccaacagtgtagttaatgagcctccaagactgtac
tcctccaaagagctcagctcttattatgagaaactaccggttgtagctccaggggttgtt
gccagtattggggctgctgtgcccagccagggagctctgtccctgggcagccacagctct
aaaatctccctgtccaagccccctcctcttattaagcaccagccagagggaggagaaggt
ttagcagggaaaatcactgagcagcttagccagcaggtaacactagtccaacagcaacat
cagcaccacacaggtatagagaggatcgaacgccgaagccctgccatttctcctccctcc
tcttctacgctttcctctacagcccctaatcaccatcatcatcaccaccatcaccaccaa
cagcagcagcagcagcagcagcagcaacaccagctcagggcaatgccatcgctccaccga
gcacctgtcttccatccccccacacaacacgcgctggaacgaaaagaggctgcagagcga
gagagggagcgagagaaggaaagggagaaagaacgggagagagctggttatggtggacgc
ctgtctccaccaaccctcacacccatccagccagttagcttagtggcaactggtagcaaa
acatcagcagagcagcagaaacctcccacactgctgccagaactcagggacgtcaaaggt
catggaaacgctgccgccatcacctctgtagcctctgtcataagtggggagattatgact
ccatcaacagatggctggagagttggagagatgattcaggaaagaggagtgtaccctgga
gaaaaaggaatgtcgaggggcaagccccaagctgcaatggcatcagtcattgtacgtcca
tcgacatccattaagtacgacagtcttattggtgctaacaaatctggtggtgtgatccat
caggatctcccccatgggaggttttacccttccaagtttcagggggaatgtcctaggtta
ggggagagtattagagaacttggagctggcagggttatccaatccaactcaaatatggat
gacatgtgtgtccagtataaaaggaactctgtgtgtggtatgcagggaattatgggaggc
agtaccacaaactctttgtgtagaactgttgtttcagcttcatcaacttttggcattcag
aataaatctggtgcagccacccatgagctaggttactcggtttcagcccgggacgagatt
acagcccataaaactagcattggtggctgggtgctgggtcactcaggaccaggagagcac
caggagggctttatctcgcgtaccacatctccaggggggtcattgcctccccctagtcca
gcagggacaccccaacccagtccaagcctcacaccaacacctagctcaatttttggctcc
ggtcagcctttatcctcctcctttgtccatctcaagaagcacaaagctgccctagctgcc
gctcagtccaggaacaacttctcaactgctctcacatccatcacaactggaaacccttcc
ctgtctgtggattcaattgacaaagctcgcattcacagctccccgcctccaccctcctca
agccaagcctcatcattatcagttgacagcagtagcagcagctcagcaagtggcagcact
acaccaggcaagtccagtcccctgcccaacaaccagtgctcaggatcagcctcaacaagc
agtggccagtccagtaactaccacaagctgaagaaagcctggttaacccgccactcggag
gaggataggaatacaactgctacaacaacttccactagtgctaaaccagagaaactgcca
agcactaccaccaccaccatcaccaccatcaccaccaccagcacaagtaacacaagtaac
accacagccatgtcagaaattatcaaaccctgtacagtaaatctcagcgcctccacctcc
agtgaggtggaaatgagcaaggacattgtaagcaaaggtgagagagagaggcaggcagag
gagaagatggcagctgcagcagcaggaggaggagctggggaggaaagaaaaccagctcct
ttatcaaggcgaggtaacaaacggtcatacgagtccggttcagagagtggaggagatgac
tctgacaccagtgagagcaagatggagggccgagccaaacgtcagcctaaacccacctac
aagaagaagcagaatgacatggccaagaggaaaggagacaatgaaaaggaggaagatgac
gtgaagcctaatggtatcttcagatcagcccgggagaagaccaaactcaaactggccagc
agcaatggcatcccccgctctgtgctgaaggattggaggaaggtaaagaagctgaagcag
acaggagagtctttcctgcaggatgactcatgttcagaaattggacccaacctgcagaag
tgtcgggagtgcagggtgatccgcagcaagaagggagaagagcaggcacattctcctgta
ttctgtcgtttctactatttcagaaggctttcctttagtaaaaatggagtcatccggatg
gatggtttctctgctccggaccagttcgatgatgaggccctggccctgtgggcccctgag
gcgattgaggagaaccacctggaccaatccacagccaagtacatactcagctttattgga
gacaagttctgtcagatagttgtgactgagaatactgcagctagctgggtcaagaaggat
gccaagctggcatggaagcgagcagttcggggggtgagggagatgtgtgatgcctgtgaa
gcaacactcttcaatatccactgggtctgtcaaaaatgtggcttcgtggtctgcctagac
tgctacaaggccaaggagagaaggagctccaaagataaagaactatacggctggctgaag
tgtgtgaaaggccaaccccatgatcacaaacacctgatgccaactcagatcatacccggc
acagtgctgacagagttggtgacttccatgcactcgatgagagataaacacgacatcaaa
tcccactgtgcctgcaccaacaaacagaacctcctcatcaaactaccagccaccaatgga
gtctcacaggttctgcagaacgtcctgaaccacagtaacaagctgtctctggtgaagtct
gagccgggctctctgcagaactctgatccagtaggaaccaaggcagagactaatggagca
ggcagtccaggcagcgatacaggaagtgctcctgtcaccccaccagagtcccagtcacct
ctgcacttcctggctgacctggcagaacagaagtccagggaggaaaagaaagaaaacaaa
gtgtctgtgttgttgggcaaatccgtgaaggaggataaggcaggagaaagcctggaggtc
ctgcagcagtgtaaaaccacctccctggtaacaaacaatacagagcagggctccacgctt
agagatctgctcaccaccacagctgggaagctgaagctgggctctactgacgcaggaatc
gcctttgcaccagtctactctactgcttcacagactggaaagagtggacggtccatgccc
aatatccttgatgatatcattgcttcagttgtggagaataaaatccctgccagtcgccag
aacatcaccaagctgtcaatcaagcaagagcctgtcaatgcaggttgcggcggcaccaac
aacgccaacccccctgctgttactgaagatgtcaaaccagagaggaagaagtcagtgcat
gttactgcaactgtgccagaggattcaactagtcagtatccagacatcccccactcctgg
tttaacaacagacggttactttggctcaaagatcaccgcaaccagaacaactggaagctg
tttagagaatgctggaaacagggacagcctgtgctggtgtcagggatccataagcgactg
aatgctgctctgtggaaagctgactccttcaaccaagagtttgcagaccatcagggtgac
ctcctcaactgtaaagaccaggtggtgtccaactccgggatcaaagagttctgggatgga
tttgaggacatcaccaagcggcccaagtccaaggatggagaacctatggtctacagactg
aaggactggccgtctggagaggagttcatggccctcatgccctcaagatatgatgacttg
atgaagaacctgcccctgccagagtactctgacccagagggcaacctcaacctggcctcc
cacctcccatctttcttcgtcaggccagatctggggccgaggctctgctgtgcttatggt
gtagctgcttctcaggaccaggactttgggactgccaacctccacgtggaagtgtcagat
gttgtgtccgttctggtctatgtaggagtagctaaaggcaacggagtcctgtccaaaacc
ggagtgttgaagcgtttggaggaggaggatctagatgagggagttcggaaaaggctcaaa
gactccagtgagacaccgggggcgctgtggcacatctacctcaacagggacatggacaaa
gtccgggagttcctgtacaagctctgtaaggagcagggattggaggtgtccccggaccag
gacccaatcagagagcacggctggtatctgagcaggaagcagcgccagcggctgcaggat
gagcatggagttcagggctggactgtagttcaattcctgggagactctgtccttatacca
gcaggggctatgcaccaggtccagaaccttcacagctgtgtacaggtcatcaatgacttt
gtgtctcctgagcacgtggccaactcctaccatctgacccaggagctgcggcccagtaaa
gaggaggtcaactatgaggataaactacaggtgaagaatatcctgttccactgtgtgaag
gaggcggtgaactcgctgaagaggagcagctctgaggaagacaatgaggaagataactca
tga
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integrated database retrieval system
