Hippoglossus hippoglossus (Atlantic halibut): 117752685
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Entry
117752685 CDS
T07778
Symbol
tdrd1
Name
(RefSeq) tudor domain-containing protein 1 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117752685 (tdrd1)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117752685 (tdrd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
Agenet
zf-MYND
MYND_ZMYND11_ZMYD8
HCV_NS2
Tudor_FRX1
zf-HIT
Motif
Other DBs
NCBI-GeneID:
117752685
NCBI-ProteinID:
XP_034426131
LinkDB
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Position
19:complement(6537973..6565885)
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AA seq
1173 aa
AA seq
DB search
MNRSLSPNMVQPNLPLRKPSSSPMAVSAPALRHLSGPGAAAPLRPATGATGDGLVHPLVI
RSNSGVLGSEPPALTVYFCNFCGHQGNFRCTRCKKTAYCSVVCQTEDWKVHRHTCKSVDP
EPAKAKPKEISASPVTGDPAGQLELKHTDAPSLQRVYLKDLNMRKSVMGTEIKASVVEFY
SPGRFYLLSQTPELLEALKVISVELQKTYSCPSATTYVPCDGEVCGVQFSSDLNWYRGLI
QTLSPDQKTAKILYIDFGNEECVPVTRIRPLSANIQPFSPCAMECRIAGVLPLAKNWSSE
CCVAVRQLLAGKTVTVKLVETVENSCIHVVDILLSMGNTLRMFLLEYGYAAEEPINAAPT
QQEISVMMSASLENFKRQSNGKDDNTWAHPPEPLTQAVGDSFSVVVIDFQSPTDIIVQKV
EHAGVIQELQLNLREHCSRVPAPQNFRPAPGTVCCAQFSEDKQWYRAKVLAYPSEERVCV
GYVDFGNSEEVELGHLRPISTSLLALPMQAMPCGLAGVQPVGESWSDDCLLALRRRVSNR
ILRVEIQRADEGKASVAIIDEASDPQANIAELLISAGYAAPTPVATTSSNQQVDQTTSAS
PELPVSTPASEPLVWSFPEFPCDGQTVALLPSVLDNPGEFYCRLDNPADHQRLIDLGAEL
KQHCEADNSLFEPKVGEPCCAVFRGDGAWYRAMVKELCENQVSVNIADYGYSMKVERHQL
RSITQRLLALPFQAVRCWLSGVEPPGSEWSSEALLWFQTLVDGEQLSARVLSVTEQGYGV
ELQSRGQNVADALISVQLAKVPGEVPKEIHANTGSEAKYPESATQNELSQNLAQASIQAG
ATSKEMPAEEQTAVPSEVPSFPVNWKTVELPLNETFKPYIAAVASPSLFYLLGPSLVVDQ
QTLQRLMMDVAAYCSNNQASLSSAVLSRPAPGAACCVQFSADSNWYRAVVLEAGEKELSV
IYADYGNTEKVPLSRILPIPEHLLQLPFQITRCILAGKEHFPVEWPEEVQQLFQTVLSND
VLATALSFDGSANVLSLTLPAERGGGQVTAMIVEALQILTKTNPSPATTQRAEQTDSSTP
PVSSTAEPECPQPKSLPETQKRPEHTTAASGSTITSEPTSLTRQQIKKTHVESDSDPQTS
GCCCASLKTKMDHLEQLMQLHISLMGQFVGQKK
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgctcactttctccaaacatggttcaacccaacctgcccctgaggaaaccgtca
tccagcccgatggctgtttcggccccggctctgaggcacctctccgggcccggagctgca
gcacccctccgccccgctactggtgccaccggagacggtcttgttcatccactggtcatc
aggagtaactctggagtgttgggatccgagcccccagcactgactgtgtatttctgcaac
ttctgtgggcaccaaggaaactttcggtgcacgcgctgcaagaagacggcttactgctct
gtggtgtgtcagacagaagactggaaggtgcacaggcacacgtgcaagtccgttgatcca
gaacctgcaaaagcaaaaccaaaggaaatcagtgcttcacctgtgacaggagacccagcc
ggccagttggagttgaagcatactgatgcacccagcctccagagggtgtatttaaaagac
ttaaatatgcgcaaatctgttatgggaacagaaatcaaggcatctgttgtcgagttctac
agccccggcagattttaccttcttagccaaacccccgagttgctggaagccctgaaggtc
atcagcgtggagcttcagaaaacgtacagctgcccctcagcaacaacatacgtgccctgt
gatggggaggtttgcggagtgcagttctcctcggatctgaactggtaccgaggcctcatc
cagactttgtcacctgaccagaagacggctaaaatcctttacatcgactttggcaatgaa
gagtgtgtccctgtgaccaggatcagacccctgagtgccaacatccagccatttagtcct
tgcgcaatggagtgtcgcatcgctggggtgctgccattggctaaaaactggtcaagcgag
tgctgtgttgcagtgaggcagctgctggctggcaagactgtgactgtgaagctggtggaa
acagtcgagaatagttgcatccacgttgtggacatcctgctttcaatgggaaatacattg
aggatgttcctccttgaatatggttatgcagcagaggaaccgatcaatgcagcaccgact
cagcaggaaataagtgtcatgatgagtgcatccttggaaaacttcaagcgtcagtccaat
ggaaaggacgacaacacctgggctcatcctccagagcctctgacccaggcggtgggtgac
tccttttctgttgtggtcatcgacttccaatcacccactgacattattgtacagaaggtg
gaacatgctggagtgattcaggagttgcagttgaacctgagggaacattgctctcgagtc
ccagcccctcagaacttcagaccagcacccggcactgtttgctgtgcccagttctcagag
gacaagcagtggtacagggccaaagttctggcatatccctcagaagaacgcgtctgtgtt
ggctatgttgattttggcaactccgaggaggtggaattaggtcacctgcggcctataagc
acttcattactggccctgccaatgcaggctatgccttgtggccttgcaggggtccagcct
gtaggggagagttggtcagacgactgcctgttggccttgcggcgaagagtatcgaaccga
atactgcgcgttgagatccagagagccgatgagggcaaagcttccgtggccataattgac
gaggccagcgatcctcaggccaatatagctgagctgctgatctctgccggttacgctgca
cccactcctgttgccaccacgagtagcaaccagcaggtcgaccagacgacatcagcttct
cctgaactgcctgtgtcgactccagcctctgagcctctggtgtggtcttttcctgagttt
ccctgtgacggccagacagtggcgctgctgcccagtgttctggacaaccctggagagttc
tactgccgcttagacaatcctgcagaccaccagcggctgatagatcttggggctgagctg
aagcagcattgcgaagcggataactcactttttgagcccaaagtaggagagccgtgttgt
gccgtgtttcgaggtgatggagcatggtaccgggctatggtgaaggagctgtgtgagaac
caggtgtccgtgaacattgcggactatggttacagcatgaaagtagaacggcaccagctc
agatccattacacaacgactcctggctctacccttccaggcagttcgctgctggctctca
ggtgtagagcccccgggttcagagtggagcagcgaggccctcctgtggttccagactttg
gtggacggcgagcagctctctgcacgtgtcctctctgtcactgagcagggctacggggtg
gagctgcagagcagagggcagaatgtggccgatgccctaatttctgtgcagctggccaaa
gttcctggagaggttcccaaagagatccatgcaaacacaggctctgaagccaaataccca
gagagtgcaacacaaaatgagctcagccaaaaccttgcacaagcctccatccaggcagga
gccacttccaaagagatgccagctgaagagcaaactgctgtgccatcagaagtaccatct
ttcccagtcaactggaagacagtggaactgcctctcaacgagacctttaagccgtacatc
gcagctgtcgctagtccttccctcttctacctgcttggtcccagtttggtagtagaccag
cagacgctgcagcggctgatgatggatgtagctgcctactgcagcaacaaccaggcatct
ttgtcctctgctgtcctgagcagaccagctcctggggctgcctgctgtgtccagttctct
gccgacagtaactggtaccgtgcagtggtcctggaagccggtgagaaagagttgagtgtc
atctatgcagattatggcaacactgaaaaggtgccgctctcccgaatcttaccgatcccc
gagcacctgctgcagcttccctttcagatcacccgctgcatcctcgctggtaaggagcac
ttccccgtcgagtggccagaggaagtgcagcagctgtttcaaaccgtcctctcgaatgac
gtcctcgccaccgctctgtccttcgacggctccgctaacgtgctgtcgctcactctgccc
gctgagagaggcggagggcaagtcactgccatgatagtggaagcactgcagatcctgacc
aagacaaatccttccccagccaccacccagagggctgaacaaaccgacagcagcacgcct
cctgtcagctccacggccgagcccgagtgcccacagcccaagtccctacctgaaacccag
aagaggcctgaacacacaacagctgccagtggatcaaccataacttcagagccaacgtcc
ctcactcgccaacagattaaaaaaacacatgtagaatcagacagtgatcctcagacctcc
ggctgctgctgtgccagcctgaagacgaagatggatcacctggagcagctgatgcagctg
cacatttctctcatggggcagttcgttggacagaagaaataa
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