Hippoglossus hippoglossus (Atlantic halibut): 117752788
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Entry
117752788 CDS
T07778
Name
(RefSeq) integrin alpha-M-like
KO
K06461
integrin alpha M
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04145
Phagosome
hhip04514
Cell adhesion molecule (CAM) interaction
hhip04517
IgSF CAM signaling
hhip04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117752788
04517 IgSF CAM signaling
117752788
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117752788
09142 Cell motility
04810 Regulation of actin cytoskeleton
117752788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117752788
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhip04147
]
117752788
04515 Cell adhesion molecules [BR:
hhip04515
]
117752788
04090 CD molecules [BR:
hhip04090
]
117752788
00536 Glycosaminoglycan binding proteins [BR:
hhip00536
]
117752788
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117752788
Exosome [BR:
hhip04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117752788
Cell adhesion molecules [BR:
hhip04515
]
Integrins
Integrin alpha subunits
117752788
CD molecules [BR:
hhip04090
]
Proteins
117752788
Glycosaminoglycan binding proteins [BR:
hhip00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
117752788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
Copine
Motif
Other DBs
NCBI-GeneID:
117752788
NCBI-ProteinID:
XP_034426299
LinkDB
All DBs
Position
19:5371535..5385379
Genome browser
AA seq
1136 aa
AA seq
DB search
MAWIFAAAVFMSVLNTALCFNIDPVAWKSWDNSAAGFGYQVVQRQSDVLISAPLEQYSQL
GRGKIYKCTTTCRSLPFEVPEFAVNMSLGLTMTNDPISRNTMACGPTIPKDCKSITMYSG
ACFQIDQFDRFGSAVPPSSPECRAEADIAFLLDGSGSVFPGDFKTMKNFVKTLVRPFVGK
DTQFAVVQFSYDVTVELNFRDFFSSGQWESEINGIRQKGHGTNTARSIQYVVQNVFTSAG
GSRPNVKKILIVITDGESTDSHNLPNAISLAENAKIVRFAIGVGGAFDSTRAKKELDSIA
SSLSTNHVFRVESFDALDAITKNLQDKIFSIEGSQSTGETLKMEMAQAGFSVAYVPGGIQ
MGTVGANQWKGGYMEYTLSGQKLISYEPLFMLQDSYLGYSMTTARTRQGQLTIVGAPRYQ
HRGLVMAVRGRINQKIDPFPWQFQTGGYFGAEVRAMDVNDDGYTDLILISAPMYKEADRE
GRVYVCGLAHLMVECHFESPLVLRGDESDQARFGSSLAVLPDLNADDLREVAVGAPLENG
GQGSIYIFHGEGGSRVSSTYSQKIAASEVRQQLRFFGMSISDSSFDRSGDSLPDLAVGSK
GTVVLLRSKPVVMVEATMSFNPNQVPTKNPNCQNPLENTAEICFTMTKLSTVSTAGAKIN
YTLTLDATRKVPNNRAYIKDKQREKTGSIEVDLRRPKCFPVKFFIQACPQDALNALRNEL
RFTFDGIPSTTNLKPSLAQQAQTTTYHSLKFEINCGTDNKCVDNLKVDFNFNSSSELKVD
IDELLDVTVSVENRDEDSYNSYVKLTYPAGLSYRKFTGLQGRIECNSLDSENGLSRGMTT
CTINNPIFKSDTEALFTVSYGIESNRRFDRKIFISANASSENQEHSTSSELYQMKWLDVK
YIILVTIESCLSYNNFTSGKNDVLKPHKQSIVVTNNIRALNFTVVIKVPVKLGDKDIWVD
SSSLQIPDCRREADEERTVTDFVAMIKENNVVDCSVARCRVFRCSRFMGRLESKKYKISA
NISSGWIEQIGLDSAKFLLTSTATLEYDTNQYIFFSTGSNNKPPIHKIEAKIEVYPQPDF
TKEIVGGSLGGLALLALLTAGLYKAGFFKSKYKEMMNEAEEAAEPGANEAAATPEQ
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggcctggatatttgctgctgcagtattcatgtcagtgttgaatacggctctatgtttc
aatatcgaccccgtggcttggaagtcctgggacaacagtgccgcagggtttggctaccag
gtggtgcaaagacagtcagacgtgctcatcagcgctccccttgaacagtattcacaattg
ggaagggggaaaatatacaagtgcactacaacctgcagaagtctgccatttgaagtgcca
gaatttgcagtcaacatgtcccttggtttgacaatgacgaatgaccccatctcacgaaac
actatggcatgtggcccaaccatcccaaaggattgcaaaagtatcaccatgtacagcggc
gcatgcttccagatcgaccagtttgatcggtttggatccgcggtgccgccgtcctctcca
gagtgcagagccgaagcagatattgcttttctcttggatggttcaggcagcgtattccct
ggagattttaaaacaatgaagaattttgtgaaaacactggtacgcccatttgtgggaaaa
gatacacagtttgctgttgtccagttctcttatgatgtcactgttgaattgaactttcgt
gactttttctcatctggacaatgggagtcggaaatcaatggaataagacaaaaaggccac
ggaactaacacagctagatccatccaatatgtggtccaaaatgttttcacatcagcagga
ggttctagaccaaacgtgaagaagatcctgatcgtcattactgatggagaatctactgac
agccataacttgccaaatgcaataagcttagctgagaatgcaaagattgttcgatttgct
attggggtggggggagcgttcgattccacaagggcgaaaaaggaactggactctattgca
tcttcgctctcgacaaatcacgtgtttcgagtagagagctttgacgcacttgatgcaata
acgaagaatttgcaggacaaaatcttctctattgagggatctcagtccactggagagaca
ctgaaaatggaaatggctcaggcgggattcagtgtggcttatgtgccagggggaattcaa
atgggcactgttggcgccaaccagtggaaaggaggctacatggaatacacattatcaggc
cagaagctgatttcatatgagcctttgttcatgttacaagacagttatctgggttactcc
atgactaccgctagaaccagacaaggccaattgacaattgttggcgctccgagatatcaa
cacagaggacttgtgatggcagttcgtggacggatcaatcaaaagattgatcccttccca
tggcagtttcagactggtggatattttggggcagaggttcgtgccatggatgtgaacgat
gacggatacactgacctaatcctcatatctgcccctatgtacaaggaagctgatagagag
ggaagagtttacgtttgcggtttagctcatttgatggtcgagtgtcacttcgaatctccg
ttagtgctgagaggggatgagtccgaccaggcgaggtttggctcttctctcgctgtgctg
cctgatctcaacgcagatgacctcagggaggtggcagttggtgcacctctggagaacggt
ggtcaaggcagcatctacatattccacggcgaaggaggaagcagagtcagttcgacttac
tcacagaaaattgctgcctctgaagtccggcaacaacttaggttcttcggtatgtcaatc
agtgactcgtcttttgaccgcagtggcgacagtctgcctgacttagcagtggggtcaaag
ggcacagttgtcttactcaggtcaaagcctgtggtaatggtagaggctacgatgtcgttc
aacccaaaccaggtccctacaaaaaacccaaactgccagaacccactggagaacacagct
gaaatctgctttaccatgaccaaactttctacagtttccacagctggagcaaagatcaat
tatactttaacactggatgccacccgcaaggtcccaaacaacagagcttacatcaaggac
aaacaacgagagaagaccgggtcaattgaagttgacttacgaaggccaaaatgcttccca
gtgaaattctttattcaggcttgtcctcaggatgctctcaatgcacttagaaatgagctc
agattcacctttgacggtattccctctactacaaaccttaaaccaagtctggcccagcag
gctcaaactaccacttatcattctttgaaatttgagatcaactgtggcactgacaacaag
tgtgtagataacctgaaagtggatttcaacttcaacagctcctcagagttgaaggtggac
attgatgaactgttggatgtcacagtatcagtggagaaccgagacgaagactcctacaac
agctacgtgaaacttacgtacccagctgggctctcctacaggaagttcacaggtttgcag
ggaagaatcgagtgcaactccttggacagtgaaaatggcttatcacgaggaatgacaacc
tgcactattaacaaccccattttcaagagcgacactgaggctttgttcaccgtctcctat
gggatcgaaagcaacagacgatttgacaggaagatttttatctctgcaaatgcttccagt
gagaatcaggaacattccacttcaagtgaactttaccaaatgaaatggttggacgtgaag
tacatcattttggtcacaattgaaagctgcctcagctacaacaacttcacatctggaaag
aacgatgtgctgaaacctcacaagcagtcaattgtggtcacaaacaacatcagggcgctg
aacttcacggtggtgatcaaggtgcctgtcaagctcggcgataaagacatctgggtggat
tcgagcagtttgcagattccagactgccgaagagaagcagacgaagaacgtactgtcaca
gactttgttgctatgataaaggagaataatgtagtggactgctctgtagccaggtgcaga
gtgttcaggtgcagtaggttcatgggaagactggagagtaaaaagtacaaaatctctgcc
aacatcagttcaggatggatagagcagattggactcgactctgcaaaattcctcttgacc
agcacggctactctggagtacgacacaaaccagtacatcttcttttctacggggtctaat
aacaagcctccgattcacaagattgaagccaagatagaagtctatccacaaccagatttc
accaaagaaatcgtcgggggatcgctgggagggttagctctgctggctctactcactgct
ggcctgtataaggctggatttttcaagagtaaatacaaagaaatgatgaatgaggcagaa
gaagcagcagaaccaggggctaatgaagctgcagccacaccagaacaataa
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integrated database retrieval system
