Hippoglossus hippoglossus (Atlantic halibut): 117752793
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Entry
117752793 CDS
T07778
Name
(RefSeq) integrin alpha-D-like
KO
K06461
integrin alpha M
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04145
Phagosome
hhip04514
Cell adhesion molecules
hhip04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117752793
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117752793
09142 Cell motility
04810 Regulation of actin cytoskeleton
117752793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117752793
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhip04147
]
117752793
04515 Cell adhesion molecules [BR:
hhip04515
]
117752793
04090 CD molecules [BR:
hhip04090
]
117752793
00536 Glycosaminoglycan binding proteins [BR:
hhip00536
]
117752793
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117752793
Exosome [BR:
hhip04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117752793
Cell adhesion molecules [BR:
hhip04515
]
Integrins
Integrin alpha subunits
117752793
CD molecules [BR:
hhip04090
]
Proteins
117752793
Glycosaminoglycan binding proteins [BR:
hhip00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
117752793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
VWA_2
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
Copine
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
117752793
NCBI-ProteinID:
XP_034426303
LinkDB
All DBs
Position
19:5387954..5414970
Genome browser
AA seq
1136 aa
AA seq
DB search
MAWIFAAAVFMSVLNTALCFNVDPVAWKSWDNSAAGFGYQVVQRQSDVLISAPLEQYSQL
GRGKIYKCTTTCRSLPFEVPEFAVNMSLGLTMTNDPISRNTMACGPTIPKDCKSITMYSG
ACFQIDQFDRFGSAVPPSSPECRAEADIAFLLDGSGSVNPGDFQTMKTFVKTLVRLFVGK
DTQFAVVQFSDDVTVELNFRDFFSSGRWESKIDGIKKKGSITNTARSIQYVVQNVFTSAG
GSRPNVKKILIVITDGASTDSQNLPNAISLAENAKIVRFAIGVGRAFSTTQAKQELDSIA
SSLSTNHVFRVESFDALDAITKNLQDKIFSIEGSQSTGETLKMEMAQAGFSVAYVPGGIQ
MGTVGANQWKGGYMEYTLSGQKLSSYEPLFMLQDSYLGYSMTIAKTRKGQLTIVGAPRYQ
HRGLVMAVRGQINQKIDPFDWQFQTGEYFGAEVRAMDVNNDGYTDLILISAPMYKEADRE
GRVYVCGLGRLRVECHFESPLVLRGDESDQARFGSSLAVLPDLNADDLREVAVGAPLENG
GQGSIYIFHGEGGSTVSSTYSQKIAASEVRQQLRFFGLSISDSSFDRSGDSLPDLAVGSK
GTVVLLRSKPVVMVEATMSFNPNQVPTKNQNCQNPLENTAEICFTMTKLSTVSTAGAKIN
YTLTLDATRKVPNNRAYIKDKQREKTGSIEVDLRRPKCFPVKFFIQACPQDALNVLRNEL
RFTFDGIPSTTNLKPSLAQQAQTTTYHSLKFENNCGTDNKCVDNLKVDFNFNSSSELKVD
IDELLDVTVSVENRDEDSYNSYVKLTYAAGLSYRKFTGLQGRIECNSLDSEDGLSRGMTT
CTINNPIFKSDTEALFTVSYGIESNRRFDRKIFISANASSENQEHSTSSELYQMKWLDMK
YSILVMIESSLSYNNFTSGKNDVLKPHKQSIVVTNNIRALNFTVVIKVPVKLGDKDIWVD
SSSLQIPDCRREADEEHTVTDFVAMIKENNVVDCSVARCGVFRCSRFMGRLESKKYKISA
NISSGWIEQIGLDSAKFLLTSTATLEYDTNQYIFFSTGSNNKPLIHKIEVEIEVYPQPDF
TKEIVGGSLGGLALLALLTAGLYKAGFFKSKYKEMMNEAEEAAEPGANEAAATPEQ
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggcctggatatttgctgctgcagtattcatgtcagtgttgaatacggctctatgtttc
aatgtcgaccccgtggcttggaagtcctgggacaacagtgccgcagggtttggctaccag
gtggtgcaaagacagtcagacgtgctcatcagcgctccccttgaacagtattcacaattg
ggaagggggaaaatatacaagtgcactacaacctgcagaagtctgccatttgaagtgcca
gaatttgcagtcaacatgtcccttggtttgacaatgacgaatgaccccatctcacgaaac
actatggcatgtggcccaaccatcccaaaggattgcaaaagtatcaccatgtacagcggc
gcatgcttccagatcgaccagtttgatcggtttggatccgcggtgccgccgtcctctcca
gagtgcagagccgaagcagatattgcttttctcttggatggttcaggcagcgtaaaccct
ggagattttcaaacaatgaagacatttgtgaaaacgctggtacgcctatttgtgggaaaa
gatacacagtttgctgttgtccagttctctgatgatgtcactgttgaattgaactttcgt
gactttttctcatctggacgatgggagtcgaaaatcgatggaataaaaaaaaaaggcagc
ataactaacacagctagatccatccaatatgtggtccaaaatgttttcacatcagcagga
ggttctagaccaaacgtgaagaagatcctgatcgtcattactgatggagcatctactgac
agccaaaacttgccaaatgcaataagcttagctgagaatgcaaagattgttcgatttgct
attggggtggggagagcgttctcaaccacacaggcgaaacaggaactggactctattgca
tcttcgctctcgacaaatcacgtgtttcgagtagagagctttgacgcacttgatgcaata
acgaagaatttgcaggacaaaatcttctctattgagggatctcagtccactggagagaca
ctgaaaatggaaatggctcaggcgggattcagtgtggcttatgtgccagggggaattcaa
atgggcactgttggcgccaaccagtggaaaggaggctacatggaatacacattatcaggc
cagaagctgagttcatatgagcctttgttcatgttacaagacagttatctgggttactcc
atgactatcgcaaaaaccagaaaaggccaattgacaattgttggcgctccgagatatcaa
cacagaggacttgtgatggcagttcgtggacagatcaatcaaaagattgatccctttgac
tggcagtttcagactggtgaatattttggggcagaggttcgtgccatggatgtgaacaat
gacggatacactgacctaatcctcatatctgcccctatgtacaaggaagctgatagagag
ggaagagtttacgtttgcggtttaggtcgtttgagggtcgagtgtcacttcgaatctccg
ttagtgctgagaggggatgagtccgaccaggcgaggtttggctcttctctcgctgtgctg
cctgatctcaacgcagatgacctcagggaggtggcagttggtgcacctctggagaacggt
ggtcaaggcagcatctacatattccacggcgaaggaggaagcacagtcagttcgacttac
tcacagaaaattgctgcctctgaagtccggcaacaacttaggttcttcggtttgtcaatc
agtgactcgtcttttgaccgcagtggcgacagtctgcctgacttagcagtggggtcaaag
ggcacagttgtcttactcaggtcaaagcctgtggtaatggtagaggctacgatgtcgttc
aacccaaaccaggtccctacaaaaaaccaaaactgccagaacccactggagaacacagct
gaaatctgctttaccatgaccaaactttctacagtttccacagctggagcaaagatcaat
tatactttaacactggatgctacccgcaaggtcccaaacaacagagcttacatcaaggac
aaacaacgagagaagaccgggtcaattgaagttgacttacgaaggccaaaatgcttccca
gtgaaattctttattcaggcttgtcctcaggatgctctcaatgtacttagaaatgagctc
agattcacctttgacggtattccctctactacaaacctgaaaccaagtctggcccagcag
gctcaaactaccacttatcattctttgaaatttgagaacaactgtggcactgacaacaag
tgtgtagataacctgaaagtggatttcaacttcaacagctcctcagagttgaaggtggac
attgatgaactgttggacgtcacagtatcagtggagaaccgagatgaagactcctacaac
agctatgtgaaacttacgtacgcagctgggctctcctacaggaagttcacaggtttgcag
ggaagaatcgagtgcaactccttggacagtgaagatggcttatcgcgaggaatgacaacc
tgcactattaacaaccccattttcaagagcgacactgaggctttgttcaccgtctcctat
gggatcgaaagcaacagacgatttgacaggaagatttttatctctgcaaatgcttccagt
gagaatcaggaacattccacttcaagtgaactttaccaaatgaaatggttggacatgaag
tacagcattttggtcatgattgaaagctccctcagctacaacaacttcacatctggaaag
aacgatgtgctgaaacctcacaagcagtcaattgtggtcacaaacaacatcagggcgctg
aacttcacggtggtgatcaaggtgcctgtcaagctcggcgataaagacatctgggtggat
tcgagcagtttgcagattccagactgccgaagagaagcagacgaagaacatactgtcaca
gactttgttgctatgataaaggagaataatgtagtggactgctctgtagccaggtgcgga
gtgttcaggtgcagtaggttcatgggaagactggagagtaaaaagtacaaaatctctgcc
aacatcagttcaggatggatagagcagattggactcgactcggcaaaattcctcttgacc
agcacggctactctggagtacgacacaaaccagtacatcttcttttctacggggtctaat
aacaagcctctgattcacaagattgaagtcgagatagaagtgtatccacaaccagatttc
accaaagaaatcgtcgggggatcgctgggagggttagctctgctggctctactcactgct
ggcctgtataaggctggatttttcaagagtaaatacaaagaaatgatgaatgaggcagaa
gaagcagcagaaccaggggctaatgaagctgcagccacaccagaacaataa
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