Hippoglossus hippoglossus (Atlantic halibut): 117753003
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Entry
117753003 CDS
T07778
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-B-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03013
Nucleocytoplasmic transport
hhip03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117753003
03015 mRNA surveillance pathway
117753003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117753003
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117753003
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_ACIN1
RRM_5
Nup35_RRM_2
RRM_MUD2_C
RRM_occluded
RBD_AKAP-17A
DDHD
Motif
Other DBs
NCBI-GeneID:
117753003
NCBI-ProteinID:
XP_034426665
LinkDB
All DBs
Position
19:complement(15157954..15163221)
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AA seq
270 aa
AA seq
DB search
MAPSPTKRKEDDKIKPRGKEKSGATKEGADKSRGREKNRTRRSASSGSSSSSSSSGSSSG
SSSGSSSSASSHSGSSSSRSSSSSSSSSPGTGRQRHNNRRRSRSKSKSAKKDDRDRRRRS
PTPKPTKVFLGRLTRNIIKDHIQEIFSTYGKIKMIDMPVNRTHPHLYKGYAYVEFETPDE
AEKALKHMDGGQIDGQEITVTAVLTPTVRLPPRRMSPPRRMPPPPPMWRRTPPRMRRRSR
SPRRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtctccaaccaagaggaaggaggatgacaagattaaaccgcgcggtaaggag
aagtcaggagccacgaaagaaggggctgacaaaagccgcggccgtgagaagaaccgtaca
cggcgcagtgcttccagtgggagcagcagctccagcagcagctccggctccagctccggc
tcctccagcggctccagctcctcggcctcgagccactcgggctcgtccagctcccgctcc
tcatcctcctcctcatcctcctcgccaggcaccggccgccagcgccacaacaacagacgg
cgctcacgctcaaagtccaaatctgctaagaaggacgacagggacagacgccgtagaagt
cccacgcccaaacccaccaaggttttcctgggccggctgacgagaaacatcatcaaggat
cacatccaggagattttctccacctatggaaagatcaagatgattgacatgcctgtgaac
cgcacccacccgcacctgtataaaggctacgcttacgtggagtttgagacacctgacgag
gcggagaaggccctgaaacacatggacggaggtcagattgacggtcaggagatcacagtc
acagccgtgctgactcctacagtgcgcctgccacctcgcaggatgtccccaccccgcagg
atgcctcctccgcccccaatgtggcgtcgcaccccacctcgaatgaggcgaaggtctcgg
tctccacggcgacgctctccagtccgccgcaggtctcgatcccccggccgccgccgtcac
cggtcccgttccagctctaactcctcgcgctaa
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