Hippoglossus hippoglossus (Atlantic halibut): 117753199
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Entry
117753199 CDS
T07778
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117753199 (vps35l)
Membrane trafficking [BR:
hhip04131
]
Protein recycling
Others
Retriever complex
117753199 (vps35l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
DUF5667
Motif
Other DBs
NCBI-GeneID:
117753199
NCBI-ProteinID:
XP_034427029
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Position
19:15938038..15949527
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AA seq
968 aa
AA seq
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MAAVQWRSRGRSYEAELQKCRPEAALVEFGDYHPIKPIMVTDTKTRRGTRKGSTSSSSSS
SSSVPPDPLSSMMDGTDPLSMFAAASASETPAISHSASAGDLGRKRREKDEEAVGPDFEP
WSSKRGDILARFTTTEKLSINLFMGSDRGKAPSPGASAVSEKVRTRLEELDDLEEGSQRE
LLNLSQQDYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLIT
DILDTFGQLVYDRIWSMCSDPQPLPDSFTVEDVNDTAKETCLNWFFKIASIRELLPRLYV
EAAILKCNRFLNKSGIQETLPRLTAMVRGIGDPLVAAYTRAYLCRVGMEVAPHLKDSLNR
NFFDLLGTFRQISGESVRKQLVMQRVEVPEYLTLYSPAISWILQCIAHRAPDPLLTEMME
RCKKVGNNALLLNSVMRAFRPEFVAARATDFIGMIKDCDEAGFPKHLLFGSLGRTLACAD
PPESERLTILNEAWKVITKVRSPQDYVNCAEIWVEFTCRHFTKREVNTILADIIKHMTPD
RAFEDAYPQLQSVITKVLTCFQDFSVLFAMERFLPFLDMFQKDSVRVEVCRSIMEVFIKH
QVDLTRDPVILNAMLHICKTMHDSVNALTLEDEKRSLALLIIGFIRMVSFGRDFEQQLSF
CVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGSHSRKTAAFVRACAAYSFITIPSLS
SIFSRLSLYLLSGQVALANQCLSQADAFLKAAVSILPEVPRSISVDGKLRSSESFLLDFI
NNFLAMLLVVPDHPEHGVLYLVRGLLNVVQDYTWEDNSDAKVRVYISALPLLAAMSQETY
LYSVPKVDSNETLYGGDPKFLSEINKLCETLIGQILDHLKILGRDEQNARRQGTVALSLF
AVLLAHGDLRNNKLSQLTINLWNLSHKHGCCETRISVRTLESIKHQAQQPDMAHLSDTVQ
RLTLQSRT
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggtgcagtggcgctcccgcgggcgcagctatgaggcggagctgcagaagtgt
cgtcctgaggcggctctggttgagtttggagactaccatcccatcaagcccataatggtg
actgatacaaagacccgccgtgggactcgtaaaggaagcacctcctcctcttcctcctcc
tcttcctcagtgcccccggaccccctaagctccatgatggatgggactgaccccttgtcc
atgtttgcagcagcctcagccagtgagactccagccatttcacacagcgcctccgcaggg
gaccttggaagaaagaggagggagaaggatgaagaggccgtgggaccagactttgagccc
tggtcatcgaagcggggagacatcctggcccggttcaccaccaccgaaaaactctcgatc
aatcttttcatgggctctgacagaggaaaagctcccagtccaggagcctcagctgtttca
gagaaagtccgcactcgcctggaggaactggatgatctggaagagggttcccagagagag
ctgctgaacctctcccagcaggattatgccaaccgcatcgaggagctgaaccagtccctg
aaggaggcgtgggcctcggaccagaaggtcaaagccctgaagattgtcattcagtgctcc
aagcttttgtctgacacctcagtgatccagttctaccccagcaagtttgtccttatcacc
gatatccttgacacttttggtcagctagtgtacgatagaatctggagcatgtgttcggac
ccacagccgttgccagactcgttcacggtggaagatgtgaacgacacggccaaagagacg
tgcctcaactggttcttcaagatcgcctccatcagggagctgctgcccagattatacgtg
gaggctgccattctcaagtgcaaccgcttcctcaacaaatctggcattcaggagacgctc
cctcggttgacggccatggtcagagggatcggagaccctttggtggccgcgtataccaga
gcctacctctgcagggtgggcatggaggtggccccgcatttgaaagacagcctgaaccgc
aacttcttcgacctgcttgggaccttccgccagatcagcggcgagagcgtgcggaaacag
ctggtgatgcagagggtggaggtgcccgagtacctgacgctctattcgcccgccatcagc
tggatcttgcagtgcatcgcccaccgagctccagatcctctgctaacagagatgatggag
agatgcaagaaagtaggaaacaatgccttgctgctgaattcagttatgagggcgttcagg
ccggagttcgttgcagccagagccaccgacttcatcgggatgatcaaagactgcgatgag
gccggcttcccaaagcatctgctgttcggatctctgggtcgcaccctggcttgtgccgac
cctccagaatctgagaggctgacgatcctgaacgaagcctggaaggtcatcaccaaagtc
cgcagtcctcaggattacgtcaactgtgctgaaatctgggtggagttcacctgccgacac
tttacaaaacgtgaggtcaacaccatcctcgctgacatcatcaaacacatgaccccggac
cgggcgttcgaagacgcctatcctcagctgcagtcggtgatcacgaaggtcctcacctgt
ttccaggacttctccgtcctcttcgccatggagcgcttcctgccgttcctggacatgttc
cagaaggacagtgtgagagtggaagtctgcagatccatcatggaggtcttcatcaaacac
caggtggatctcaccagagacccggtcatcctcaacgccatgctgcacatctgcaagacc
atgcacgactctgtcaacgctctcactctagaggatgagaaaagatctttggctctgctg
atcatcggcttcatccgcatggtttcttttggccgtgattttgagcagcagttgagtttc
tgtgtggaggccagagccaccttctgtaacctggagcccgttctggtgcagctcattcac
acggtgaaccagctggcgatggagaccaggagggtgatgagagggagtcactcccgcaaa
acggcagcgttcgtcagggcgtgcgctgcctacagtttcatcaccatcccgtctctcagc
agcatcttcagtcgtctcagcctctatctgctgtctggtcaggttgcgttggccaatcag
tgcctctcccaggcggatgccttcctgaaggcagcggtcagtattctcccggaggtccct
cgctccatcagcgtggatgggaaacttcgctcctccgaaagcttcctgctggacttcatc
aacaacttcttggccatgcttctggttgtcccggaccatcctgagcatggcgtactctac
ctagtccgaggtctgctcaacgtggtccaggattacacctgggaggacaacagcgacgcc
aaggtgcgggtttacatcagtgctctgcccctgctggccgccatgagccaggaaacttac
ctttactccgtccccaaagtggattccaacgagacgctctatgggggagaccccaagttt
ctctcagaaatcaacaaactttgtgagaccctgatcggacagatcctggatcatctgaag
attctgggtcgtgacgagcagaacgcacggcgtcaaggcactgtcgccctctctctgttc
gccgtcctgttggctcacggcgacctgaggaacaacaagctgagccagctcaccatcaac
ctgtggaacctcagccacaaacatggatgctgtgagactcgcatctcggtccggactctg
gagtccatcaaacaccaggctcagcagcccgacatggctcacctgtcggatacagtccag
aggctcacactgcagtcccgcacctga
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