Hippoglossus hippoglossus (Atlantic halibut): 117753331
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Entry
117753331 CDS
T07778
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03272
Virion - Hepatitis viruses
hhip03273
Virion - Lassa virus and SFTS virus
hhip04140
Autophagy - animal
hhip04142
Lysosome
hhip04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117753331 (lamp1a)
03272 Virion - Hepatitis viruses
117753331 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117753331 (lamp1a)
04142 Lysosome
117753331 (lamp1a)
04140 Autophagy - animal
117753331 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117753331 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhip04147
]
117753331 (lamp1a)
04090 CD molecules [BR:
hhip04090
]
117753331 (lamp1a)
Membrane trafficking [BR:
hhip04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
117753331 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
117753331 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
117753331 (lamp1a)
Exosome [BR:
hhip04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
117753331 (lamp1a)
CD molecules [BR:
hhip04090
]
Proteins
117753331 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
DEC-1_N
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
117753331
NCBI-ProteinID:
XP_034427264
LinkDB
All DBs
Position
3:10108682..10116729
Genome browser
AA seq
416 aa
AA seq
DB search
MKLSHAVAALLVACCAGLGCVQAVTLEVKEGNSTCIKAELSASFSITYDTFSSTRTAQFT
LPDSATVDTRSSSCGTEESFPWLEAVFGPGHALGLSFSSNASLYSVANLTLQYNLSDSTI
FPEANSSDVVTVVSASVGIWAAINTTYRCVSPVALRVGGANVTFSGMRLEAFMPGNDLSP
TESVCLADTSSTTAPPTTAAASTTTAPAPTPSGTPEHGMYSVKNSNGTECLLAQFGLQFN
ISYFSKSQNKTVQDLVNLTPTQTNASGSCEASRATLVLTEKQDTTLNFTFTLNSTTNKYH
LSGISLLANWPDMTARFSAINTSLEYLPSSLGRSYMCNAEQTLIVAPTLSLNTFRLQVQP
FGVITDQFATAEECQMDQDQMLIPIIVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctctcacgcggtggccgcgctgctcgtcgcctgctgtgccgggttaggttgt
gttcaggccgtgactctggaggtaaaagaggggaactccacctgcattaaggctgagctt
tctgcatcattctccatcacatacgacaccttcagcagcacgagaacggcgcagtttact
ctgcctgactccgccacagtcgacaccagaagcagctcgtgcggcacagaggagagcttt
ccttggctggaggcggtgttcggacccggccatgctctggggctgagcttttcctccaac
gcgagtctgtacagcgtcgcgaacctgacgctgcagtacaacctcagcgattcgacgatc
ttccctgaagccaacagctccgatgtggtcacagtggtgtcggcttccgtcgggatctgg
gcggcaatcaacaccacctaccgctgtgtgagccccgtcgctttaagagtcggtggagcg
aatgtcactttctctggcatgaggctggaggccttcatgccaggaaatgacctgagtcca
acagaaagcgtctgtttggcggatacaagcagtactacagctccacccaccaccgctgct
gcttcgacaacaacagctccagcaccgacgccttcaggaacacccgaacacggcatgtac
tctgtaaagaacagcaatggcacggaatgtctcctggctcagtttggacttcagttcaac
atctcctacttctctaaatctcagaataagactgtccaggatttagtaaacctgacccct
actcagacaaatgcatcaggatcatgtgaagccagcagagctaccttggttttgacagaa
aagcaagacaccacactcaacttcaccttcacgctgaactccacgaccaacaagtaccac
ctgagtgggatatctctgctcgccaactggcctgatatgacagctcggttctccgccatt
aacaccagtctggagtacctgccgagttcactgggccgctcgtacatgtgtaacgcagag
caaactctgatcgtggcaccaaccttgtctctcaacacattcagactgcaggtccaaccg
tttggagtcatcacagaccagtttgctacagcggaggagtgtcagatggaccaggaccag
atgctcatccccatcatcgtcggggcagcgctcgctggcctggtgctgattgtgctcatt
gcgtacctaataggtaggaagaggagccatgctggataccagaccatctga
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