Hippoglossus hippoglossus (Atlantic halibut): 117753669
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Entry
117753669 CDS
T07778
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31-like
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04217
Necroptosis
hhip04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117753669
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117753669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117753669
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117753669
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117753669
Multi subunit type E3
LUBAC complex
117753669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
PUB
IBR
Zn_ribbon_RanBP
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
117753669
NCBI-ProteinID:
XP_034427776
LinkDB
All DBs
Position
20:18823298..18834297
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AA seq
1110 aa
AA seq
DB search
MSSSSLSVQMDEVRRRAQSVLSSSGVAQDVKADVQTMASIALPLSEKYRHLTAEDMLREN
TASRSKQEVLESLSRLVKALGILEKYGCNLTFPARPKYWRSVKHNNPVFRTTVDAIKGGR
RVLFLYGYTNQQIDGLSFPDEVGQPDSEIVAAVTLEVMTLRTEVDMIVKGTHPHLEHFKD
IFPFLEQQEADVNDSVVIPPAEEQQVDNPQVLSPSPKPAPGPVGQPLKPSAGSLAACNLC
GSPSSLVCPSCDSRAFCDACDGLFHRHPSRAAHKRDKIQKSKLETCGICGVSTVQSQCST
CVQRLCLNCDKLFHSHPDRKGHNRSVLAAAKTASLSLSPWACAHCTTVNEMRAVLCSTCE
RPRLSTAASTAQESSVPTSPNTEWQCKSCTVMNQGSSILCEVCERPRLATRPPVAPAPSS
SGSQSDVNTKWTCQFCTYVNTKPTVCEMCSLPCKDSPGDSVPQSLQQPPSVTKDQTQAAA
VKPTASPGVNLELKRQQMMREDGLSLIHQIREAEKQDVSPEEVYAALCVCGGSNVNPCDW
LTSELPHLLDEICAMAASVQLNCKTGDSGIQPVVDRDREESAESEPSATVEDVKLSRAEA
KLAWLAAGGDTDRAVTQLLRDRQAKMRELHSLGFRDVTQCEEALRLSGGEVKGALSLLQR
PLLEPFHQRIWTTQLEPPIDPKNPDKQRMCRRLLALYDLPSWGRCELVLALLQEPDVTYS
LEDVVQAVKESHDKDFIRRLLKNECPCCLCIFPRCKMQSLTSCQCSVCQECFGQHFTVAV
RDKHIRDMVCPVCGEPDINDPEQLDSYFSTLDIQLRDCLEPEVYELFHKKLTEHALMKDP
KFLWCCHCISGFINDGDQLKVTCPSCRKSFCTQCKKPWEPQHQNLSCEQFQQWKRENDPE
YQRQGLAGYLRDNGITCPHCRFQYDLTKGGCMHFCCSQCRYQFCSGCNNPYHKTGCTKPQ
CSIPGLHAHHPRDCLFYLRDWEPPRLQALLQRSGVEFNTDPSTGTQTDTCGVMEQKDEGG
QHSDSPCGLKTQPGQAGLCERHYREYLVSLINAHSVDPALQYDAVELVRACERYQVDVQR
GEGEDDNVYHARLLQKLGEVPLGEKVPRNK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagctctctctccgtgcagatggacgaggtccggaggagagctcagtccgtc
ctgtcctcctccggcgtcgcccaggatgtgaaggccgacgtccagacgatggcgagcatc
gctctgccgctgtcggagaagtaccgccacctcacagccgaggacatgctgagggagaac
accgccagccgcagcaagcaggaggtcctggagtcgttgagcagactggtcaaggccctg
ggtattctggagaagtacggctgtaacctgaccttccccgcgcggcccaaatactggagg
agcgtcaagcacaacaacccggtcttcagaaccacggtggacgccatcaagggaggccgc
agagtcctcttcctctacggttacaccaaccagcaaatcgatggcctcagttttccggat
gaagtcggccaaccagactctgaaatagttgccgcagtgacgctggaggtcatgacctta
cgcacggaggtggacatgatcgttaagggcacccatcctcacctagaacacttcaaagat
atcttcccatttctcgagcagcaggaggcggatgtgaatgactctgtggttattccgcct
gcggaggagcagcaggtagacaatccacaggtcctctctccttcacccaaacctgctccg
ggccccgtgggacagcccctgaagccgtcagctggatctctcgcagcttgtaatttgtgt
ggtagcccttcgtcactggtttgcccctcatgtgacagtcgggccttttgcgacgcatgt
gatgggctctttcatcgccacccttccagagccgctcacaagagagacaaaatacagaaa
agcaaactggagacctgcggtatctgtggtgtttccactgtccagtctcagtgctccacc
tgtgtccagaggttgtgtctgaactgtgacaaactgtttcactctcaccccgaccgcaaa
ggacacaacaggtctgtcctcgcagcagccaaaacagccagtctgtctctgtctccttgg
gcgtgtgcacactgcaccacggtgaacgagatgcgagctgttctctgctcaacctgcgag
cggcctcgactctccacggctgcttccaccgctcaagagagttcagttcccacctcacca
aacaccgagtggcagtgtaagagctgcactgttatgaaccagggcagcagcatcctgtgc
gaggtgtgtgagcgccctcgtctggccactcgcccgcctgtcgccccggccccgtccagc
tctggatctcagtctgatgtcaacacaaagtggacctgtcagttctgcacctatgtgaac
accaagcccacggtgtgtgagatgtgcagcctgccatgtaaagactctcctggcgactcg
gtgcctcagtctcttcagcagccgccgtccgtcactaaggatcaaactcaggcggcggcc
gtgaagccgacggcgagtccaggagtgaacctggagctgaagagacaacagatgatgagg
gaggacggactcagcctcatccaccagatcagggaagcagaaaaacaagatgtcagcccg
gaggaggtgtacgcggccctgtgcgtgtgcggcggcagcaacgtcaacccctgtgattgg
ctgacgtcagagctgcctcacctgctggatgaaatctgcgctatggcggcgtccgtccag
ctgaactgcaagacaggggattctgggatacaacccgtggtggatagagacagagaggag
tcggcggagagcgaacccagcgccacagtcgaagatgtgaagctgtccagagccgaggct
aagctggcgtggttagcagcgggaggagacaccgacagagccgtgacgcagctgctgaga
gaccgacaggccaagatgagggagctccactctctgggcttcagggatgtgacccagtgt
gaggaggctctgcggctgagtggaggtgaggtcaaaggggccttgtctctgcttcagcgc
cccctactggagcctttccaccagcgtatctggaccacccagctcgagccgccgattgat
cccaaaaacccggacaaacagaggatgtgcaggcggctgctggcgttgtacgacctgccc
agctgggggcgctgtgagctggtgctggcgttgcttcaagagccagatgtcacctactcc
ctggaggatgtggttcaagctgtgaaggagtcacatgacaaggatttcatcaggcgtctc
ctcaagaatgagtgtccgtgctgcctgtgcatcttccctcggtgcaagatgcagtctctg
acttcctgccagtgctcggtgtgtcaagagtgtttcggtcagcacttcaccgtcgctgtg
agagataaacacatcagagacatggtgtgtcccgtctgtggagagcccgacatcaatgac
cccgaacaactggacagctacttctccacactggacatacagctgcgcgactgtctggag
cctgaagtgtacgagctgtttcataaaaagttgacggagcacgctctcatgaaagaccca
aagttcctctggtgctgtcactgcatctctgggtttatcaacgatggagaccagctgaaa
gtcacatgtccgtcatgtcgcaaaagtttttgtacccagtgcaagaaaccttgggagcct
cagcaccagaacctgtcctgtgagcagttccagcagtggaagagggagaacgaccccgag
taccagaggcagggcctggccggctatttgagagacaacggcatcacctgtcctcactgt
aggttccagtacgacctgaccaaaggcggctgcatgcacttctgctgctcccagtgcagg
taccagttctgcagcggctgcaacaacccgtaccacaagacgggatgtacgaagcctcag
tgcagtatccccggtctacatgcacatcaccctcgagactgtctcttctatctgagagac
tgggaaccaccgagactccaggccctgctgcagaggagcggagtggagttcaacacggat
ccttccactggaactcaaactgacacttgtggagtgatggagcagaaagacgaaggaggt
caacacagcgattcaccgtgtggcctcaaaacacagccaggacaagctggactctgcgag
agacactaccgcgagtacctggtgagtctgatcaacgctcactctgtggacccggctctg
cagtacgacgccgtggagctggttcgagcctgtgagcgataccaggtggacgtgcagaga
ggggagggcgaggacgacaacgtgtatcacgctcgcctgctccagaaactgggtgaggtt
cctctcggagaaaaggttccgcgcaacaaatga
DBGET
integrated database retrieval system
