Hippoglossus hippoglossus (Atlantic halibut): 117753695
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Entry
117753695 CDS
T07778
Symbol
itgb1a
Name
(RefSeq) integrin beta-1a
KO
K05719
integrin beta 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03271
Virion - Rotavirus
hhip04145
Phagocytosis
hhip04510
Focal adhesion
hhip04512
ECM-receptor interaction
hhip04514
Cell adhesion molecule (CAM) interaction
hhip04517
IgSF CAM signaling
hhip04518
Integrin signaling
hhip04530
Tight junction
hhip04810
Regulation of actin cytoskeleton
hhip04820
Cytoskeleton in muscle cells
hhip05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
117753695 (itgb1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117753695 (itgb1a)
04514 Cell adhesion molecule (CAM) interaction
117753695 (itgb1a)
04517 IgSF CAM signaling
117753695 (itgb1a)
04518 Integrin signaling
117753695 (itgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
117753695 (itgb1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117753695 (itgb1a)
04530 Tight junction
117753695 (itgb1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117753695 (itgb1a)
04810 Regulation of actin cytoskeleton
117753695 (itgb1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117753695 (itgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117753695 (itgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhip04147
]
117753695 (itgb1a)
04515 Cell adhesion molecules [BR:
hhip04515
]
117753695 (itgb1a)
04090 CD molecules [BR:
hhip04090
]
117753695 (itgb1a)
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117753695 (itgb1a)
Exosome [BR:
hhip04147
]
Exosomal proteins
Proteins found in most exosomes
117753695 (itgb1a)
Cell adhesion molecules [BR:
hhip04515
]
Integrins
Integrin beta subunits
117753695 (itgb1a)
CD molecules [BR:
hhip04090
]
Proteins
117753695 (itgb1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
117753695
NCBI-ProteinID:
XP_034427838
LinkDB
All DBs
Position
20:complement(4579961..4608227)
Genome browser
AA seq
798 aa
AA seq
DB search
MDLKLLLISTLFGVICYSNAQKEGNECINANAKHCGDCIQAGAKCGWCKDPDFLKQGETV
STRCDEVQSLLKRGCNRTMIENPHGKRVILKNKAVTNRTKGEVKLKPEDITQIQPQKLNL
TLRSGEPQSFDLKFKRAEDYPIDMYYLMDLSYSMKDDLENVKNLGTNLMVEMSKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGTKFNNLVGKQHI
SGNLDSPEGGFDAIMQVAVCGKLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENGVYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYQELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLPEGVTIAYTSHCKNGVVSEGESGRKCSNISIG
DQVMFRISVTSKGCPKGGEQETIKIKPLGFTEEVEITLHFICECECHKKGINNSGLCHGN
GTYECGACKCYEGRVGRKCECSSNDVATEDMDRTCRKDNGTDICSNNGECVCGTCECKKR
DNPEERYSGQYCGCDNFNCDRSGNKLCGGHGRCECRVCVCDPMWTGSACDCSLDNSTCMA
SNKQICNGRGTCECGTCKCTDPKFQGPTCETCPTCPGVCTEHKECIQCRAFGTGEKKETC
ERDCSYFNLIKVKDRDKLPQPNDASYPVMHCKERDANDCWFYYTYAVNNNTDKEVHVVDS
LDCPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGEN
PIYKSAVTTVVNPKYEGK
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaagctgctcttgatatccacattgttcggagtcatttgttacagtaatgct
caaaaagaggggaacgagtgcatcaatgccaatgccaaacactgcggggactgcatccag
gccggagccaaatgtggctggtgtaaagacccagacttcctgaaacaaggagaaactgtg
tcgacccgctgtgacgaggtgcagtctctgttgaaaaggggctgtaataggacgatgatt
gagaacccgcacggcaagcgggtgatcctgaagaacaaagcggtgacaaatcgcacaaag
ggagaagttaagttgaagccggaggacatcactcagattcagccccagaaactcaacctc
accctccgatccggtgagccccagtcgtttgacttgaagttcaaaagagcagaggattat
cccatcgatatgtactatttgatggacctgtcctactccatgaaggacgatctggagaac
gtcaagaacctgggaaccaatctgatggtggagatgtcaaagatcacctctgacttcagg
ataggttttggttcctttgtggagaaaacagtcatgccgtacatcagcaccaccccggcc
aagctgctgaacccatgcacgggcgatcagaactgcaccagccccttcagctacaagaac
gtcctgaagctgaccagcaacggcaccaagttcaacaacctggtgggcaagcagcacatc
tctggaaacctggactcacctgaggggggcttcgatgccatcatgcaagtggctgtgtgt
gggaagctgattggctggaggaacgtgactcgtctcctggtcttctccactgacgctggc
ttccactttgctggagatggtaaactgggcggcatcgtgctgccaaatgatggaaaatgt
cacttggagaacggcgtttatacaatgagccactactatgactatccctccattgctcac
ctggtgcagaagctgagcgacaacaacattcagactatctttgcagtcacagaggagttc
cagcccgtttaccaagaactgaaaaatctgataccaaagtctgcagtgggcactctgtct
gccaactccagcaatgtaatcaaccttattatagacgcttacaattctctctcgtcagag
gttattctggagaacagcaaacttccagagggagtgaccatagcctacacatcccactgt
aagaacggtgtggtcagtgagggcgaaagtggacgcaagtgctccaatatctccatcgga
gatcaggtcatgttccgcattagtgtgacttcaaagggctgtccgaaaggaggcgaacaa
gagaccattaagatcaagcccctgggcttcacagaggaagtggagattaccctgcacttc
atctgtgaatgtgaatgccacaagaaaggcattaataacagtggactctgccacggtaac
gggacctacgagtgtggagcctgcaagtgttatgaagggcgagtgggcagaaagtgcgaa
tgcagcagtaacgacgttgccacggaggacatggaccggacctgccgcaaagacaacggc
acggacatctgcagcaacaacggagaatgcgtgtgcggcacatgcgagtgcaagaagaga
gacaaccctgaggagaggtacagcggacagtactgcgggtgcgacaacttcaactgtgac
cgctctggaaacaaactgtgtggagggcatggtcgctgtgagtgcagagtgtgtgtctgt
gaccccatgtggaccggcagcgcctgtgactgctctctggacaacagcacatgcatggcc
agcaacaagcagatctgtaacggcaggggaacgtgtgaatgtggcacctgtaagtgcact
gaccccaaattccagggtcccacttgtgagacctgccctacctgcccaggagtctgtact
gaacacaaagagtgtatccagtgccgggcgttcggcacaggtgagaagaaggagacatgc
gagcgagactgcagctacttcaacctgattaaagtgaaggacagagacaagctgccccag
cccaatgacgcgtcctaccccgtgatgcactgcaaggagagggacgccaacgactgctgg
ttctactacacctacgctgtcaacaacaacaccgataaggaggtccatgtggtcgactct
ctggactgccccgccggtcctgacatcatcccgatcgtggcgggtgtggtagccggcatc
gtcctgattggcttagccctgctgctcatctggaagctgctgatgatcattcatgacagg
agagagttcgccaagtttgagaaggagaagatgaacgccaaatgggatacgggtgaaaat
cccatctacaaaagtgctgtcacgactgtggtcaaccccaaatatgagggaaaatga
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