Hippoglossus hippoglossus (Atlantic halibut): 117753720
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Entry
117753720 CDS
T07778
Symbol
rttn
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hhip03037
]
117753720 (rttn)
Cilium and associated proteins [BR:
hhip03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117753720 (rttn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
TPR_Trm732_C
Nup188_N-subdom_III
DUF4628
Motif
Other DBs
NCBI-GeneID:
117753720
NCBI-ProteinID:
XP_034427882
LinkDB
All DBs
Position
20:10850479..10883738
Genome browser
AA seq
2230 aa
AA seq
DB search
MELSPLIKKIAHSLVEIRVRALKSIISKLDHSLISVCDIVQEKMLFVYLLEWFNFPEVPM
QEQVLELLTTLSKHPSAAQMLRDVGAVDFLTQLSPNVEPRLRAVISGTLDQLFQLPELLH
SRTMVYSHGPRDAALTAPTVVPPEDFPKMGYFHKSMPARTEVPPHKIPVHESVRCLKFSV
FPWLTLTNTDRHILSSNESSLRSNNPNLVRTTCDLLCDVIMQDFPPEIFLQRPSIVKNLL
SLLRGGAGKGEPSYLHLQAVSCLRQLCAGLRRRLRFHQDPSFYSTKQDPVSQNSSFSYSQ
EVRGTQRSNASSPGGECSPRPSVVGRTGQRARGDGQDGDVASNSGSSNRGGAATQAPRQT
AQSPADTAHLELPDLGAEDVLELQLQQLTLAQFTVSIMEHAIPLLKTEGSHVFHRVLGLL
CDAILLLGDSVCELVWDDRSLVGMELKEKLQAFMELLGDILSYHQSHPADIPHSAQIHHR
MAYTGTAIFTIKLLQTILPPEKAGDNLPESTATAVFHLCLDTSLGSLFPSVQETAVAYLE
QVNSDHHDLYSRVTRAALWMESTCNFLKEAQAEGEKNWLELLELADQAIDGLPFHQHLPI
VKECVHICSYLWRFDQPSPLLQTESQKLLLKLLSHPLPSVKTDTYTCALNLVKDCVGIQN
VSRQQKGACDAINFLLHHRVLYELSAFGLQDSAEKVNVAAKDILLFLLKGRLMMTASTWD
RFNEALYPVMPILQGYAGTEESLGNCVLLISDTSDVTRDNVFPSSAKLKAALRLLFTKQP
AVRTAAAQQVIPHLTNADEAKTVRQDQDQPVISMLPSLYCVRNPLDISLDTNSKSVLKVE
SVEKLFCILSSDTVDISLKRSAAGQLSVVLQDTTMHPVLKNLGITDKVLSFIMGSVNGNK
SLDCLLEPCICILRKLVYADPSLRHSLAQRNLLLLTLLRASLILKENKSSGNEIAILMSL
LLFDEIAGIEIWSDKSSTDVTLAPFSLPLTVIRRYNLPFQAASHHAVSPYCCVLPSSSGL
LTLAPARQALQVAWNTAWHSGIDNLLEELHGNSTRDPEFHPDLKLSDEQVLWLRAVHLPA
ALPDCIQAIGRAAGHRSVTSALSRLSLYLLIDRLALPHVPSHSCRDTLHSLSWHSAMTRF
LQVRPACVEDERLLVGIVAFLNAYFRQMHTESASDPEDEDLRWILELLLSQESVSLLNLL
LAVETQTSTQNTGEPEELKNHVGQRLQRELTGFFNTLLLRLSCTTDRLCLALAGPFKSQL
AVCLLRSLRVSDAPRFYGLPSLERTLQGMVSLTAEPGWSSHCPDLEPVSLCSKYLSGLLE
VISSFYVEWGGNSMSFMGKGVTKNAVISLLHLSHEMLTENKDKDFISQWSLGNEAAAEEA
SNSQLGLAWLIPLWVDRDPEVRFASLALGGALSSVPSGCQTLCASCQNISGGLWGTLLNI
LLDQQESSMVRREAAFILLNLLVMPMPANAEEAKDSDWQHPCVHDEVSGLSLVGLPALQA
LLYHCQFFQHVALSASICYRGRYTFHVQPAGCGSSQESESLDSESSLWFWRCDPPAPAAS
SRRPSSSLSTSSTVIRGSEPHIPKAFSSLSISEDTPASRLTAQGQSDTDTSDSVTSQDSR
QCEPLAAEPVVMVTPDLLTAHCGLLTSLLSILPEFTLTAIGHNQLLQALSSLVEIRPIEK
CLNELNSPNVLPGEREDIKSQFVTLLQLLSGFSKLLQSCITVNQELIPELDFTKQLLTTL
VAVLMLDTKGLDAGTRDTVCLCWADVFMLLATLVRRDSSAAYPSVSAALGKRWRTFAGTL
SVCVTEKFADPQLHTVALQFLCAIFTEETKSRGDEATTPNSKCATSLTDVVNGPSAGQLC
ELLLQSFDKRTLQDPLKKLTARALTTLLACSPTAQSHAANAGLIDSCVEQMKQTHSQLHL
ESVRPSKASLRKKEEAHLKEVRLSVEILRSALYRNDECKVVASDARLTLTLYALWPWLLL
DDPNMEAVLELLCVYTANCTTACSSLCGSIPPGSKGSSSSSLMHAVMKLASGLAPDNSPV
QKLAFSLLTNLAMSRDCRGLLQKNNFLQAFVSVPVPKAGGGGGVLGLWLKLLVTLSFAED
IQQSLLRVTGVLELLADLAAHRRNALLTLHNLCLWPANKPHVIASDKAMKTLLCCLESKE
METRCMGASALWALLHNNQRAKTTMKCPSIRRRIDEAHTISKKAAAENNPDPMGPYLLKC
FENLSQLLNN
NT seq
6693 nt
NT seq
+upstream
nt +downstream
nt
atggagctatctcccctcattaagaaaatagctcactcgctggtggagatacgcgttcgg
gcgctgaagagcatcatctccaagctggaccactccctgatctccgtctgcgacatcgtc
caggagaagatgctgttcgtgtatctgctggagtggtttaatttccccgaggtgccgatg
caagagcaggtcctggagctgctcaccaccctgtcaaagcatccgagtgcagcccagatg
ctcagagacgtcggggcggtggacttcctcactcagctgtctcctaacgtggagcccaga
ctgcgagctgtcatcagtggaaccctggaccagctgttccagctgcctgagcttctccac
agcagaacaatggtctactcgcatggaccacgtgatgcagctctgacagctccgactgtt
gttccacctgaagattttcctaaaatgggctatttccacaagagtatgccagctcgtaca
gaagttccacctcacaagatcccagtgcacgagtctgtgagatgtctgaagttttctgtg
tttccatggctgactttgacaaacacagacagacacatactttcatccaatgagagttcc
ctaaggagcaacaacccaaacttggtgcgaaccacatgcgatcttctgtgcgatgtcatt
atgcaggactttcctccagagatcttcctgcagaggccaagtattgtaaagaaccttctt
tccctattgagggggggtgctggtaaaggtgagccgagctacctccacttgcaggctgtc
tcctgcctgcggcagctttgtgcagggctaaggaggagactgcgctttcatcaagatcca
agcttctactctacaaagcaagatccagtgtcccagaattcctccttctcctactcccag
gaggtgcgggggacccagcgttccaatgcctcctccccagggggagagtgctctccccga
ccctctgtggtgggacgcacgggccaaagagccaggggagatggccaagatggggatgta
gcttccaacagtggcagctcgaacaggggtggagctgcaacccaggcccccaggcagacg
gcccagtcacctgcagatacggcccatctggagcttcctgacctgggggcggaagatgtc
ctggagctgcagttacagcagctcactctggcccagttcacggtttccatcatggagcat
gctataccgcttcttaagacagagggttcgcatgtgttccatcgtgttctggggctgctc
tgtgacgccatcctcctgctcggggacagcgtgtgtgagctggtctgggacgatcgcagc
ctggtggggatggagctgaaggagaagctgcaagcctttatggagttattgggcgatatc
ctgagctaccatcagagccacccagcagacattcctcacagcgctcagattcaccacaga
atggcttacacaggcacggccatatttaccattaaactcctacagaccatcctccctcct
gagaaggctggtgacaatctcccagaaagcactgcgacagctgtattccatctatgcttg
gacacatctttggggagtttattccccagcgtgcaagagacagcagtagcttacttggag
caggtgaactctgaccaccacgacctctactcgagggtgacccgtgctgccctctggatg
gagtccacttgcaactttctcaaagaagcacaagctgagggagaaaaaaactggttggag
ttactggagctggcagaccaggccatcgacggcctcccgtttcaccagcacttacccatc
gtcaaagaatgtgttcacatctgctcttacctgtggaggtttgatcagcctagcccgctt
ctccagacagagagccagaaacttctcctcaagctgctgtctcatcctttaccgtccgtc
aagacggatacgtacacatgcgcactcaacctggtcaaggactgcgttggcatccagaat
gtgtcacgacagcaaaaaggagcctgtgatgcaatcaacttcctgctccaccacagagtg
ctctatgaattaagtgcgtttggactccaggactctgcagaaaaagtgaacgtggctgcc
aaggatatcctgctattcctgctcaagggacgattgatgatgacagcatcaacctgggac
agattcaacgaggcactttacccggtcatgcccatattgcagggttatgccggcaccgaa
gagtcactgggtaactgcgtcctgctgataagtgacacgtcggacgtgacaagagacaac
gtgtttccaagctcagccaaactaaaagcagcactccgtctccttttcacgaaacagcct
gctgtgagaacagcagcagcgcaacaagtcattcctcacctaaccaacgctgatgaagct
aaaacagtcagacaagaccaggatcaaccggtgatctccatgctgcccagtctctactgt
gtcagaaatcctttggacatctcactggacacaaacagcaagtctgtcctcaaggtggag
tcggtggagaagctgttttgtatcctgtcctcagacactgtcgacatctctctgaaaaga
tcggcagccgggcagctgtctgtggtgctgcaagacacgacaatgcacccagtgctgaag
aatcttggaataacagacaaagtcctttctttcattatgggaagtgtcaacggcaacaag
agcttggattgcctgctggagccttgtatatgtatcctgaggaagctggtgtatgctgat
ccatctctgaggcacagcctggcacagcgcaacctcctgctcctcacactgcttagggca
tccctgatattgaaggagaacaaaagcagtgggaatgagatcgctatcttaatgagtttg
ctgttgtttgatgagattgccggcatcgaaatatggtcggacaaatccagcacagatgtg
actctcgcaccgttctcccttcctctgacagtaatacgcaggtacaacctcccgttccag
gcagcgagtcatcacgccgtcagcccgtactgctgcgtcctgccttcatcctctggcctc
ctgaccctggcccctgctcgccaagccctgcaggtggcctggaacactgcatggcattct
gggatagacaacctccttgaggagctgcatggcaactcaaccagggaccctgaatttcat
cccgacttaaagctgtcagacgaacaggttctgtggctgcgggcggtgcacctccccgcc
gcgctgccggactgcatccaggccatcggcagggcagcaggacacaggtctgtgacctct
gccctctccaggctcagcctctacctgctgattgacagactggccctcccgcatgtcccc
agccacagctgcagagacactcttcactcgctcagttggcactcagcaatgaccaggttt
ctccaggtgcgcccagcctgtgttgaggatgagaggttgctggtgggcattgttgcattt
ttgaatgcctacttcagacagatgcacaccgagtctgcttctgacccagaggacgaggac
ctgcgttggatactagagctgcttctcagccaggagtcagtgtccctcctgaatttgctg
cttgctgtggagactcagacctcgactcagaacacaggggaaccggaggaactgaagaac
cacgtcggccagagactgcagagagaactcaccggcttcttcaataccttactcctccga
ctatcatgcacgactgacaggctatgtttggcattagccggccccttcaagagccagctg
gcagtgtgtctgcttcggagcctgcgggtgtccgatgccccgcgattctatggccttccc
agcctggagaggacgctgcagggcatggtcagcctgactgctgagcctggctggagctcg
cactgccctgacctggagcccgtctccctctgctcaaagtatctcagtgggctgctggag
gtgatctcctctttttatgttgagtggggaggaaactcgatgtcgttcatggggaaaggt
gtgacgaagaatgccgtcatctctctgcttcacctgtcgcatgagatgttgactgaaaac
aaggacaaggacttcatttcccagtggtctttggggaatgaggcagctgccgaggaggct
agtaactctcagctgggtttggcctggctcatcccactatgggtggatcgagacccagag
gtgaggttcgccagcttggctctgggtggagctctttcgtcggtgcccagcgggtgccag
actctgtgtgcgagctgtcagaacatcagtggaggtctgtggggcacgttgctcaacatc
ctcctggatcagcaggagagcagcatggtccgcagagaggctgcttttatcctgctgaac
ttgctggtgatgccgatgcctgccaacgcagaggaggccaaggactcggactggcagcac
ccatgtgtccatgatgaggtgtctggcctctctttggtgggtctcccggcgctccaggct
ctgctctaccactgtcagttcttccagcatgtggctctctctgcctccatttgttaccga
ggcaggtacacgttccacgtacaacctgctggctgtggcagttcccaggagagtgagtca
ctggattctgagagttctctgtggttctggagatgcgaccctccagcaccagctgctagc
tctcggagaccctccagctccctctctacatccagcactgtgattagaggctcagagcca
cacatccctaaggctttctcctcactgagcatctcagaagatactcctgccagcaggctg
acggctcaaggccagagtgacacggacaccagcgactctgttacctcccaagattccaga
cagtgcgagccattggccgcggaacccgtcgtcatggtaactcccgacctcctgacggcc
cactgcggcctgctgactagtctgctgtccatcctgcctgagttcaccctcactgccatc
ggacacaaccagctcctccaggccctgtccagtctagtggaaatcaggcccatcgagaaa
tgtctgaatgagctgaattcacccaacgtgctgccaggagagagagaagacatcaagagc
cagtttgtcaccttactccagctcctgtccggcttctcgaagctgctgcagtcgtgtatc
acagtgaaccaggaactgattcctgagctggacttcacgaaacagctgttgacgactctg
gttgcagttctcatgctggacaccaaaggattagatgcaggtacgcgggacacggtttgt
ctgtgctgggcagacgtgtttatgctcctggctactctggtgaggagggacagctcagcg
gcgtacccatctgtctccgctgcgctggggaaacgctggcggacatttgcaggaacatta
tcagtgtgtgtaactgagaagtttgcagaccctcagctccacacagtcgctctgcaattc
ctctgtgcaattttcacagaggagactaagagtcgaggtgacgaggccacaacccctaac
tccaagtgtgcaacttctttgactgacgttgtgaatggtccctcggccggccagctctgt
gaacttttactccagagttttgataagaggacccttcaggaccctttaaagaagctgaca
gcgagagctctgacgacgctgttggcatgcagccccacagctcaaagccatgcggccaat
gctggtttaatcgacagctgtgtggagcaaatgaagcagactcattcccagctccacctg
gagtcagtccgacccagcaaggcttctctccgcaaaaaggaagaggcccatttaaaggaa
gtcaggctgagtgtggagatcctgcggagcgctctttaccgcaacgatgaatgcaaagtg
gtggcttcagatgctcgcctcacactgaccctctatgctctttggccttggctcctattg
gacgaccccaacatggaggcagtgctggagcttctgtgtgtctatacagccaactgcacc
acagcatgcagttctctctgtgggagtataccgccaggatcgaaaggctcctccagtagc
tctcttatgcacgctgtcatgaagctggcctcagggctcgccccggacaacagcccggtc
cagaagctggccttctctctcctcacaaacctcgccatgtcccgcgactgcagaggcctc
ctgcaaaagaataacttccttcaagccttcgtttcggtgccagtacccaaggcaggtggt
ggtggcggcgtactgggcctgtggctgaagctgctggtcaccctctcgttcgcggaagac
atccagcagagtctcctgagggtgaccggagtcctggagctgctggcggacttggcagct
caccggcgaaatgcgctgctcacccttcacaacctctgcttgtggcccgccaacaagcct
cacgtcattgccagtgacaaagccatgaagacgctcctctgctgcctggaaagcaaagag
atggagactcgctgtatgggagcgtccgcactttgggccttgctccataacaatcagagg
gccaagacgacgatgaagtgtccctcaatacgacggagaattgacgaggcacacaccatc
tctaagaaagcagctgcagagaacaatccggatccgatgggtccctacctgttgaagtgc
tttgaaaacctttcccagctgctaaataactga
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integrated database retrieval system
