Hippoglossus hippoglossus (Atlantic halibut): 117753776
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Entry
117753776 CDS
T07778
Name
(RefSeq) DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117753776
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Other basic domains
RF-X
117753776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
117753776
NCBI-ProteinID:
XP_034428006
LinkDB
All DBs
Position
3:15094706..15112469
Genome browser
AA seq
1439 aa
AA seq
DB search
MAEADPQQQQADRGAGSLPGLLLPGLQGAEASALQLRIKNSICKSVQSKVENILQDVEKF
SDIEKLYLYLKLPSGPSSSSSSSTEKSDQSALSSSRTQQMHAFNWIRNHLEEYPETSLPK
QEVYDEYKSFCDNLNYHPLSAADFGKMMKNVFPNMKARRLGMRGKSKYCYSGLRKRPFVH
MPSLPALDLHKSPEGLQCDVLESPGQLSSIKEEVRFAACDLVCEWAQKVLKRQFDAVEDL
ARFLIDSHYISNKSLAALTIVTGTATDVKTPQSASAFIPTAEAHSFQPHMTSLSSPSVDA
KQQLQRKIQRKQQEQKLHSPLPGEGQTKRSDDSVPSGSPPPPSPQPTIGIVVAAVPSPIT
VQRSGQLMSPSPVGTVESKVLPFNFQMVTRPMTRSPKTLQNILPSPAGERTARQRYAQIL
PKPLATTSITLHSPSAMILANSPLKTVMTTCHVSPVSLVKMTAISLAPNSGNTTTTFTNA
TLRSASAGISTSAVAEDISSNQTTRSASAVPILAPVAWQGQTAAAHSIDVEMEVEAIHQN
SQMLNPSCHILTQGAMANRSGGAVQRAASVPIPQTKGFLVLEETSLTKCNGESSSCTYAT
AEVESRNRSANNTSTSHLTPSPQNTSTVSILNTSGAPSCRESCGVTPTKESFLSNKSLRK
RSSVSPELSPVKRVFMPQQPVGGTAALGYGIRKPVGYFSRLGAPTRPESAPATREVEGKM
NSVSTTQVHSLCTSSFRPSGFYSVAKTQSSIQRKNTSTVLENSSSVSHALTQQQQGHTVA
NVHVIPNNPSFQQHSGDGRISNSTTGILEGAQQQSYTQSNPATETLEFLSQVSSSNHLPM
QTDMDYFPFDDDVTQDSIVEELVQMEEQMKLNSLRGFGVTMQGKQHVVPDNVMSTNQSMT
AFYHSANNSGNPIHTPTPTPTPTPTSEMMGGAQGFTGESPCSHFASPTPVDSALGSSRHT
PLGTPHSSCSSNVPPSPVECRNPFAFTPINSSITGFHDCSTVSSSPVKPMQRPMATHPDK
TRLEWMNNSYNSSSESLNKSNSGMGILPGYQGLIDDHFQKPHAFAVPHARYHDSSFGRLT
PISPVQQQVANMANMTKQEGFAVPAPLDNKNTNVPATNFRCRSVSPAVHQRNFCGNTGNS
AHPNVLRSVVSPYNSPVTPEMLNIFANSQTNLGVSSMAQRSRSVPLNIMMQTEVRPMAGQ
QCNNKNLGSVLLSKLDSDHDDALRGLGISNLPSSYTARMNLTQILESDPSLSCADNHLSM
MTCDTTSPCRLQRPDYLIESAINEPMHFSASESLVQSASREHQQAQSMMLTLNQQQQREE
LHQHQQLDFSSTVKDLLTGHSLAAGGQLVEQASELTTGGADFPCEIRMTSEFSSSINDLN
ALDSNLLFDPNQQQGQYQNTAPEELVNDPLFQHISSETAHSSGLDWLESKDQTTVGLMG
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcggacccccagcagcagcaggcggaccgcggggcggggagcctgcccggc
ctgctcctccctgggctgcagggcgccgaggccagtgctctgcagctcaggatcaagaac
tccatctgcaaatctgttcaatcaaaagtggaaaacattctgcaagatgtcgagaagttc
tccgacattgaaaaactctacctctaccttaagttgccttctggtccgagcagcagcagc
agcagcagcactgagaagagtgaccagagcgccctgtcttcaagccgcactcagcagatg
catgcgttcaactggatccgcaatcatttagaggaatacccggagacatctctccccaaa
caggaagtctacgatgaatacaagagcttctgtgacaatctcaactaccacccgctgagc
gctgcggactttggaaaaatgatgaaaaacgtcttcccgaacatgaaggcgcgtcgactt
ggcatgagaggaaaatcaaaatattgctatagtggattaaggaagagaccctttgttcac
atgccatcgttacctgctctggatctccataaatcaccagaaggactgcagtgtgatgtc
ctggagtcaccaggtcagctcagcagcatcaaggaggaggttcggttcgcagcctgtgac
ctggtgtgtgagtgggcccagaaggtgctgaaacgccagtttgatgccgtggaggatctg
gcccgcttcctcatcgacagccactacatcagcaacaagtctctggcagctctcaccatt
gtgaccggcacagccacagacgttaagactccacagtctgcgtcagctttcatccccact
gctgaggctcactccttccagcctcacatgacgagcctgtcgtcaccttctgtcgatgcg
aagcagcagctccagaggaagatccagagaaaacaacaggaacagaagctgcactctcct
ttacctggagagggacaaaccaagaggtcagatgacagtgtgccttccggtagcccccca
cctccgtcacctcagccaaccataggcattgtggtcgctgctgtccccagccccatcacg
gttcagagaagtgggcagctgatgtccccaagtccggtgggaacagttgagagcaaagtg
ctgccctttaacttccaaatggtgacacggccgatgacacggagcccaaagaccctgcaa
aatattctgcccagtccagcgggagaacgcacggctcggcagcgctacgctcaaatcctg
cccaaacctttggccacgacctccatcactttgcactcgccctccgccatgatccttgcc
aacagcccgcttaaaactgtgatgaccacgtgtcatgtcagcccggtcagtttggtcaag
atgacggccatatcgttggcacccaacagcggcaacaccaccacgaccttcacaaatgcg
actctgcggtcagcatctgcaggaatcagcacttctgctgttgcagaagacatcagctct
aatcaaaccacaagaagtgcttctgctgtcccaattctggccccggtggcctggcaaggg
cagacagctgccgctcacagcatcgatgttgaaatggaagtcgaagcaatacatcaaaac
agccaaatgctaaatcctagctgtcacattttgactcaaggggcaatggcaaatagaagc
ggaggggctgtacagagggccgccagtgttcccattcctcagacgaaaggcttcctggtt
ctggaagaaacatctctcactaaatgcaatggagagtcctcctcgtgcacttacgctacg
gcagaagtcgaaagcagaaatagaagcgccaacaatacaagcacttcgcacttaactccc
tcccctcagaataccagcactgtttcgatactgaacaccagcggagcaccttcatgtcgg
gagagctgtggtgtgacaccaacaaaggaaagtttcctgtccaacaaaagcctcaggaaa
cgctccagcgtcagcccagaactttccccagtcaaaagggtttttatgccccagcagcct
gtagggggcactgctgctcttggatatggcatcagaaagccagtcggttatttctccagg
ctgggagctccgactcgacccgaaagtgcaccggccaccagggaggtggaagggaaaatg
aactctgtctcgaccactcaagtccattcactctgcacttcctctttcagacccagtggc
ttttactctgttgccaaaacacagagctcaatccagaggaaaaacacctctactgttttg
gaaaatagcagctcagtcagtcacgcattaacacagcaacagcaggggcacacagtggct
aatgtgcatgtcatacctaataaccccagcttccagcagcactcaggtgatgggaggatc
tcaaactccaccacaggaatcctggaaggagctcagcagcagagctacactcagtccaat
cctgccaccgaaaccttagagtttttgagtcaagtttcatcgtccaatcatctccctatg
cagacagacatggactactttcccttcgatgacgatgtgactcaggacagcatcgtggag
gagttggtgcagatggaggagcagatgaagctcaacagcctgcgtgggttcggagtcaca
atgcaaggcaagcagcacgtggtgccggacaacgttatgtccactaatcagtcaatgact
gctttctatcactctgccaacaacagcggcaacccaatccatacaccaaccccgacaccc
actcccacaccaacgtcagagatgatgggaggagctcaaggcttcaccggcgagagtccc
tgctcccacttcgcctccccaacccccgtggacagcgcgctgggaagcagtcgtcacacc
ccactcggtaccccacactccagctgcagcagcaatgtgccacccagtccagtggagtgc
aggaatccgtttgctttcacacccatcaactccagcatcactggtttccatgactgcagc
actgtctccagcagccccgtcaagcccatgcagaggccgatggccacccacccagacaag
accaggctggagtggatgaataacagttacaacagcagcagtgagagtttaaacaagtca
aacagcggaatgggaatcctccctggttatcaaggcctgatagatgaccattttcaaaaa
cctcatgccttcgccgttcctcatgcgcggtaccacgacagcagcttcggccgcttgaca
cccatctcacctgtgcagcagcaggtagctaacatggctaatatgaccaagcaggagggt
ttcgctgtgcctgctccactggataataaaaacaccaacgtacccgctacaaattttcgg
tgtcgcagcgtgagccccgcggtgcatcagaggaacttctgtggaaacacaggaaacagc
gcccatcccaatgtccttcgttcagtggtgtctccctataattctcctgtgactcctgag
atgttgaacatctttgcaaacagccagactaatcttggggtgagcagcatggcccagcgg
agccgttccgtgccgctcaacatcatgatgcaaactgaggtccgtcccatggcaggccaa
caatgcaacaacaaaaaccttggcagtgtccttctgagcaagctggacagtgaccacgat
gatgctctgcggggtctaggcatcagtaatttaccctccagctacactgcgcgcatgaac
ctcactcagatcctggagtctgaccccagtctctcctgcgctgacaaccacctcagcatg
atgacctgtgacaccaccagcccctgcaggctacagaggccagattacctcatcgaaagc
gccattaatgaaccaatgcatttctctgcaagtgagagcctagtacaatctgcctctaga
gagcatcagcaggcccagtctatgatgttaacactaaaccaacagcagcagcgagaagaa
ctgcatcagcatcagcagctggatttcagcagcaccgtcaaagacctcctgacaggccac
agcctcgccgccggcggtcagctcgtcgaacaggcatcagagctgactacaggcggggca
gacttcccatgtgaaatcagaatgacgtcagagttctccagtagcatcaacgacctcaat
gcattggattcaaaccttctgtttgaccccaaccagcagcaagggcaatatcaaaacact
gccccagaggagttggtgaatgatccgctgtttcagcacatcagcagcgagacggctcat
tcgagtggacttgactggctggaaagcaaagatcaaacaactgttggattgatgggttga
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