Hippoglossus hippoglossus (Atlantic halibut): 117753834
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Entry
117753834 CDS
T07778
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03030
DNA replication
hhip03410
Base excision repair
hhip03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117753834 (fen1)
03410 Base excision repair
117753834 (fen1)
03450 Non-homologous end-joining
117753834 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhip03032
]
117753834 (fen1)
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117753834 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhip04147
]
117753834 (fen1)
DNA replication proteins [BR:
hhip03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
117753834 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
117753834 (fen1)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
117753834 (fen1)
Exosome [BR:
hhip04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117753834 (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
117753834
NCBI-ProteinID:
XP_034428156
LinkDB
All DBs
Position
20:complement(7579681..7585281)
Genome browser
AA seq
380 aa
AA seq
DB search
MGIHGLTKLIADQSPGAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSAELEKRGERRAEAEKMLAQAQEMGEQ
ENIDKFSKRLVKVTKHHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDM
DGLTFGTNVLLRHLTSSEAKKLPIQEFHFNRILQDIGLTNEQFIDLCILLGCDYCGTIRG
IGPKRAIDLIRQHGSIEEILENIDTSKHPVPENWLYKEARGLFLAPEVVDCSTVDLKWVE
PDQEDLVQYMCNEKQFSEDRIRNGYKKILKSRQGSTQGRLDSFFSVTGSLSSKRKEPEVK
GSAKKKQKTGSTPGKFKRGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaatacacgggctcaccaagctgatcgcggaccagtcccccggagccatcaaggaa
caagacatcaagaactacttcggcagaaaaattgccatagatgcctccatgtgcatctac
cagttcctgatcgctgtgcgacaggacggaaacgttctgcagaatgaagatggagagacg
acaagccacctgatggggatgttctaccggacgatccgcatgctggaacacgggatcaaa
cctgtgtacgtgtttgatggcaagcctccacagctcaagtcagcagagctggagaagaga
ggcgagaggagggcagaagctgagaagatgctcgctcaagctcaggaaatgggggaacaa
gagaatattgacaaattctccaaacgtctggtgaaagtcaccaaacaccataatgacgag
tgcaagaagctgctgaccctgatgggcgtcccctacatcgaggctccgtgcgaggcagag
gccagctgtgccgctctggttaaagcagggaaggtgtttgccacggcaacagaagacatg
gacggtctgacctttggcaccaatgtcctgctcagacacctcacctccagtgaagcaaag
aaacttccaatccaagaattccacttcaatcgaatcctgcaggacatcggcctgaccaat
gaacagttcatagacctgtgtattctgctgggctgtgactactgtggcaccatcaggggg
atcggccccaagagggccatcgacctgatcagacagcacggctccatcgaggagatcctg
gaaaacatcgacaccagcaagcacccagttccagagaactggctgtacaaagaggccagg
ggcttgtttctggcgcccgaggtggtggattgttccacagtggatttgaagtgggtcgag
cctgatcaggaagatctggtccagtatatgtgtaatgagaaacagttcagtgaggacagg
attcgtaacggctataagaagatcctgaagagtcgacagggcagcacacaaggacgactg
gactctttcttctctgtcactggatctctgtcctccaagcgaaaggaacctgaggttaaa
ggatcagcgaagaaaaagcagaagactggatccacaccaggcaaatttaagaggggaaaa
tag
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