Hippoglossus hippoglossus (Atlantic halibut): 117753846
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Entry
117753846 CDS
T07778
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117753846 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117753846 (nup58)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117753846 (nup58)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Nup49_C
PSY3
Motif
Other DBs
NCBI-GeneID:
117753846
NCBI-ProteinID:
XP_034428177
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All DBs
Position
20:complement(8655142..8669067)
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AA seq
612 aa
AA seq
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MSGFNFASGTLGPATAGGGFAFGAATSAPAASTGGFSFGSALGAAAAPPASIANTTASLG
LGGGLGGSLFAQKPAGGLSFNTPAQTNTIPQAQFQPGPAAPTTGLTLGAPAASVAPAGFS
LAFNKPTASATPFSLTASTASSAPAGAGLTFGSVLTSMAPQQPAATAFTLGLGAATTTTS
AALTGPSLGGGLFSNTASTGLGQTLGGGSLTLGSLLATSTAVSVAPAPSLGLGGVDFSTS
SENKSDSSSGANAQDSKALKDENLPPVICQDVDNFQKFVKEQKQVQEDISRMSSKGISKV
QDDIKSLKQLLSVNASGLQRQALAIDKLKLETAQELKNADIALRTQKTPPGLQHENTAPS
DYFRSLVEQFEVQLQQYRQQIEELENHLTTQSSGSHITPQDLTLAMQKLYQTFVAQAAQL
QSVHENVKILKHQYLSFRRAFLEDSTDVFESKRASNRKWQSTPRVTTGPTPFSSVPNAAA
VAMAATLTQQQQPTTGTQAPLGAGFGNPFASAVGSSLGSSTLGGFGGGPGFGGVGTGGSS
FAFSSTSKPTGGSLSAGFGSSSTSGFNFSNPGINPSAGLTFGVSNPPAAGFGTGGPLLQL
KKPPAGNKRGKR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcttcaactttgcatcggggaccctcggcccagccaccgcgggcggggggttc
gccttcggagcagcaaccagtgcacctgcagccagcaccggtggcttctcctttgggtct
gctcttggcgcagcagcagctcccccggcctccatagccaacaccaccgcgtctctgggc
ctcggcggtggcctcggcggcagcctcttcgctcagaagcccgcaggagggttgtcgttc
aacacgcctgcccaaactaacaccatcccacaggcccagttccaacctggccctgctgca
cccaccacaggccttacattaggtgctccagctgcctcggttgcccccgcaggctttagc
ctagctttcaacaagcccaccgcctcagcaacaccattctccctcaccgcctccaccgcc
tcgtcagcccctgctggggcaggtttaacgtttgggtcagtcctgacatccatggctccg
cagcagcctgcagccacggccttcaccctcggtcttggtgccgccacaacaaccacctca
gcagccttaacgggcccatcactgggcggggggctcttctccaacacagcctctacaggt
ttgggtcagacacttggaggaggcagcttgacattaggttctctgttagcaacctccaca
gctgtatcagtggcccctgcccccagccttggcctgggaggagtcgacttcagcacttca
tcagagaataaaagtgactcatcgtctggagccaacgcacaggacagtaaagctctaaaa
gatgaaaatttgcccccagtcatttgtcaggatgtggacaatttccaaaaatttgtgaaa
gagcagaaacaggttcaggaggacatcagcaggatgtcatctaagggcatctcgaaagtc
caggatgacatcaagagtctcaaacagcttctctctgtcaacgccagtggtctgcagcgc
caagctctggccatcgataagttaaagctggagacggcgcaggagctgaaaaatgctgac
atagcactgcggacacaaaagactccccctggacttcaacatgaaaacactgcaccgtct
gattatttccgcagtctggttgaacagttcgaggtgcagttgcaacagtaccgccagcag
atagaggagctagaaaaccacctgacgacgcagagcagtggctcccacatcacccctcag
gacttgaccttggccatgcagaagttgtaccagacatttgttgctcaggccgcccagctc
cagtcagttcatgaaaatgtcaagatcttgaagcatcagtacctctccttccgccgagcc
ttcctggaagactccacagacgtcttcgagtccaaacgggcctccaacaggaagtggcag
agcacgccgcgagtcacaactgggcccaccccattctccagtgtgcccaacgccgcagca
gttgccatggcagccacgttgacccagcaacagcagccaactacagggacccaggcaccc
ttgggggcagggtttggaaacccctttgcctcggcagtgggcagtagcttgggctcttct
acccttggaggttttggtggtgggccaggatttggtggggtggggactgggggttcttct
tttgccttctcctccaccagtaagcccacaggaggcagtctgagtgcaggctttggcagc
agcagcacctcaggcttcaacttcagtaaccccggcatcaacccctcggccggcctgacc
ttcggcgtgtcgaacccaccggccgcaggcttcggcacgggagggccgcttctccagctc
aagaagccccctgctggtaataaaagaggcaagagatag
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