Hippoglossus hippoglossus (Atlantic halibut): 117753878
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Entry
117753878 CDS
T07778
Symbol
puf60b
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-B isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117753878 (puf60b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117753878 (puf60b)
Spliceosome [BR:
hhip03041
]
Complex A
U2 snRNP components
U2 related factors
117753878 (puf60b)
Complex B
117753878 (puf60b)
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Motif
Pfam:
RRM_1
DUF1543
Motif
Other DBs
NCBI-GeneID:
117753878
NCBI-ProteinID:
XP_034428252
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Position
20:15558653..15566305
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AA seq
540 aa
AA seq
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MAVTESAGGEALTMENGQGTGSKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAH
QQQQLTNLQMAAVTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARAFNRIYVASVHPDLSDDDIKSVFEAFGRIKSCTLARDPTTGRHRGFG
FIEYEKPQSALDAVSSMNLFDLGGQYLRVGKAVTPPIPLLTPTTPGGLPPAAAVAAAAAT
AKITAQASMNPFQRDLMAFQEAVAGASVLGALAAPQLLGQQMGIPQAVMAAQAPGVITGV
TPVRPPIPVLPQVGLVNPVLASPPVLSNQAGGSSLQAKKEEKEEQLQDGTGQEMLSDQEH
MSISGSSARHMVMQKLLRKSESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGSVNRVIIY
QEKQGEEEDADIIVKIFVEFSMASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLSA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgacggagtctgcgggaggtgaagctctgacgatggagaatggacagggcaca
ggctccaagcttggcctgccgcctctcactccagagcagcaggaggcacttcagagggca
aagaagtatgccatggaacaaagcattaagagtgtgttggtgaagcagaccattgcccat
cagcaacaacagctcaccaacttgcagatggcagcagtgacaatgggctttggagatcct
ctctcacctttacaatcggtggcagctcagaggcaacgtgctctagccatcatgtgccgg
gtgtatgtgggctccatatactatgagcttggtgaagacaccatcagacaggcctttgcc
cctttcggtccaatcaagagcattgacatgtcttgggattctgttacaatgaaacacaag
ggctttgcctttgtggagtatgatgtgccagaagctgctcagctggctctggagcagatg
aactcagtcatgttgggggggcgaaacattaaggttgggcggccaagtaacatcggtcag
gcgcaacccatcattgaccagctggcagaggaggcgcgcgcctttaaccggatctacgtg
gcatctgtccaccctgacctgtcggatgatgacatcaagagtgtgtttgaggccttcggg
aggataaagtcttgcacgttagccagagaccccacaacagggcgacaccgaggctttggc
ttcattgagtatgaaaagcctcaatcagccctggacgccgtgtcttctatgaacctcttt
gacctggggggtcagtatctacgggtgggcaaagcagtgacgccgcccatacccctactg
acccccacaacccctggtggtctgccacctgctgcagctgtggctgcagcggcagccact
gctaagataacggcccaggcaagtatgaatcccttccaaagggatttaatggccttccag
gaggctgtagccggggcatcagtcttgggggcgttagctgcgccccagcttctcggtcag
caaatgggaataccgcaggctgttatggctgcccaggcaccaggtgtcattacaggtgtg
acaccagtgcgtcctcccataccagtgcttccccaggttggtcttgtgaaccccgtgctt
gcatcgccaccagtcctgtctaatcaagccggtggctccagcctacaggcgaagaaggag
gagaaagaggagcagcttcaagatggaaccggacaggaaatgttgagtgaccaagagcac
atgagcatctcaggcagtagtgccagacatatggtgatgcagaaacttcttaggaaatca
gagtctacggtgatggtgcttcgaaatatggtcggaccagaggacatcgacgacgacctg
gagggggaagtgacggaagagtgcggcaagtttggctccgtcaaccgagtcatcatttac
caggagaagcaaggagaagaggaggatgcagatattattgtcaaaatctttgtagagttt
tccatggcctcagagatgaacaaagccatccaggccctaaatgaccgctggttcggtggt
cgcaaagttgtggcagaggtgtacgaccaagaccgtttcaacagcagtgacctgtctgca
taa
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