Hippoglossus hippoglossus (Atlantic halibut): 117753917
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Entry
117753917 CDS
T07778
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117753917 (ptbp2a)
Spliceosome [BR:
hhip03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117753917 (ptbp2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
117753917
NCBI-ProteinID:
XP_034428334
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All DBs
Position
20:complement(1495890..1511375)
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AA seq
518 aa
AA seq
DB search
MDGISDVAVGVKRGSDELSMYNSPNSGMSSSSDGASNGSDSKKLRVEEAPPSRVLHIRKL
PNEASETEVIALGLPFGKVTNILTLKGKNQAFLEMGTEEAAITMINYYTTVTPHIRNIPI
FIQYSNHKELKTDAGNQRTQAVLQAVSAVQSGGSPSSDVQDALAAASSPVLRIIIDNMFY
PVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLALDGQNIYNSCCTL
RIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSLDSTVAAAFSKDSNSLLGKIPGALS
PLSAAAAAAAAAGRVALAGQTGSSGVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYN
KKDSALIQMSDANQAQLAMSHLNGQKVYGKIIRVTLSKHQTVALPRDGLDDQGLTKDFAN
SPLHRFKKPGSKNFQNIFPPSATLHLSNIPQDVTEDDLRLLFSNAGGTVKAFKFFQDRKM
ALIQMSTVEEAIQALIDLHNYNMGGNQHLRVSFSKSTI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcagcgatgttgcagttggagtcaagagaggatcagatgagctgagtatg
tacaacagtcccaactctggcatgagcagtagcagtgatggggcttccaatggcagtgac
agtaaaaagctcagggtggaggaggcccctccgtctcgtgtgctccacatcaggaagctg
cccaacgaggcctcggagacagaagtcatcgcccttggcttgccttttggcaaagtcacc
aacatcctcacactaaagggaaagaaccaggcattcttggagatggggacagaggaggca
gccatcactatgattaactactacaccacagtaactcctcatatccgcaatatccccatc
ttcattcagtactccaatcacaaggaactcaaaaccgatgctggaaatcagcggacccag
gcagtgctgcaggcagtgtcagcagtccagtcgggtggctcaccaagctcagacgttcag
gatgccctcgcagcagcctccagtcccgtgctgcgcatcatcatcgacaacatgttctac
ccagtaacgctggatgtgctgcaacagattttctccaagtttggcacagttatgaagata
atcacatttaccaagaacaatcagttccaggcccttctacagttcagtgatcctgttaac
gcacagcaagcaaaactggcattggatggtcagaacatatacaactcgtgctgcacactg
cgtatcgacttctccaagttggttaacctaaatgtcaagtacaacaatgataagagtcgt
gactacacacgacctgagcttcccgctggggacggacagcccagcctcgactccacggtg
gccgctgcgttcagtaaagattccaattctctcctcggtaagatcccaggagccctgagc
cctctgagcgctgcagcggcggctgctgctgctgcagggagggtggccctggctggacag
acagggtccagcggggtcctgctggtcagcaacctcaacgaggagatggttacgccccaa
agtctgtttaccctcttcggagtgtatggtgatgtccagagggtaaaaatactctacaat
aagaaggacagcgctctcattcagatgtcagacgccaaccaggcccagctagcaatgagc
cacctgaacgggcaaaaggtgtatgggaagatcatccgagtgaccctgtccaagcatcag
acggtggcgctgccccgtgatggcctggatgaccagggcctgaccaaggactttgccaat
tctccactccatcgctttaagaaaccgggatccaaaaacttccagaacatctttccgccc
tctgccaccctccacctctccaacatcccacaagatgtgacggaggacgacctgcgactg
ctcttctccaacgctggaggcactgtgaaagcattcaagtttttccaggatcgtaaaatg
gctttgattcagatgtcaacagtggaggaggccatccaggctttgattgaccttcacaac
tacaacatgggaggcaaccagcacctgagagtgtccttctccaaatccaccatttga
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