Hippoglossus hippoglossus (Atlantic halibut): 117754105
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Entry
117754105 CDS
T07778
Symbol
si:dkey-37o8.1
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117754105 (si:dkey-37o8.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117754105 (si:dkey-37o8.1)
03016 Transfer RNA biogenesis [BR:
hhip03016
]
117754105 (si:dkey-37o8.1)
03012 Translation factors [BR:
hhip03012
]
117754105 (si:dkey-37o8.1)
04131 Membrane trafficking [BR:
hhip04131
]
117754105 (si:dkey-37o8.1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhip04147
]
117754105 (si:dkey-37o8.1)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117754105 (si:dkey-37o8.1)
Transfer RNA biogenesis [BR:
hhip03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117754105 (si:dkey-37o8.1)
Translation factors [BR:
hhip03012
]
Eukaryotic type
Elongation factors
117754105 (si:dkey-37o8.1)
Membrane trafficking [BR:
hhip04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
117754105 (si:dkey-37o8.1)
Exosome [BR:
hhip04147
]
Exosomal proteins
Proteins found in most exosomes
117754105 (si:dkey-37o8.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Ras
Beta-prop_WDR75_2nd
Septin
Motif
Other DBs
NCBI-GeneID:
117754105
NCBI-ProteinID:
XP_034428684
LinkDB
All DBs
Position
20:15355388..15357754
Genome browser
AA seq
456 aa
AA seq
DB search
MVKEKAHVNLVVIGHVDSGKSTTTGHLVYKCGGIDQRKLEKFEKASAQMGKSSFKFAWVL
DKLKAERERGITIDISLLKFNTQKFTMTVIDAPGHRDFIKNMITGTSQADVALLVVSAAK
GEFEAGVSRSGQTREHALLAYTLGVKQMIVCVNKMDLTEPPYCQKRFDEVVRGVSGFLKK
IGYDPVTVPFVPISGWTGENMITATQKMPWFQGWKVRRREGNSSGRTLLEVLDSIQPPVR
TINKPLRLPLQDVYKIGGVGTVPVGKIETGILKPGMTLMFSPAKLTAEVKSIEMHHQGMQ
TALPGHNVGFNIKNVAVKNLRRGDVAGNAQQDPPSDVSSFEAQLIILNHPGKVKAGYSPV
LDCHTTHVTCRFAELKEKLDRRTGKKLEDNPQALVSGDAATVRLVPIKPMCVESFFTYPP
LGRFAARDLKQTVAVGVIKSVVKDHGSKPLKAQVCK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagagaaggctcacgtcaacctggtggtcattggccacgtcgacagtggcaag
tcgaccaccaccggacacctggtctacaaatgtggaggcatcgatcagaggaagctggag
aagtttgagaaggcgtcggcacagatggggaagagttccttcaaatttgcctgggtgctg
gacaagctgaaggctgagagggagcgtggaatcaccatcgatatttcactgctgaaattc
aacacacaaaagttcaccatgacagtaattgacgctccaggccatcgagacttcatcaag
aacatgataaccggaacatcacaggctgatgttgccctcctggtggtctctgcagctaaa
ggagagtttgaggccggtgtatcgagaagtggtcagaccagagagcacgccttgctggct
tacaccctgggtgtcaaacaaatgattgtctgtgtgaacaaaatggatctgactgagccc
ccttactgccagaagcgcttcgacgaggtggtgcgtggcgtgagcggcttcctcaagaag
atcgggtacgaccccgtgaccgtgccctttgttcccatctctggctggactggggagaac
atgatcaccgcaacccagaagatgccctggttccaaggctggaaggtccgacggagggaa
gggaactcaagtgggagaactctccttgaagttctggactcgattcagcctcctgtgcgc
accatcaacaagcctcttcgattacctctgcaggacgtctacaaaattggaggagttggg
acagtaccggtgggcaagattgaaacaggcatcctcaaacccggcatgaccctgatgttc
tcccccgccaaactcactgccgaggtcaagtccattgagatgcaccaccaggggatgcag
acggccctgccaggacacaatgttggcttcaacattaagaatgtggccgtcaagaacctg
cggcgtggggacgtggccggcaacgcccagcaggaccctccatctgatgtcagcagcttc
gaggcccagttgattatcctgaaccatccagggaaggtgaaggccggatactctccggtc
ctcgactgccacaccacccacgtgacctgtcgcttcgccgagctgaaggagaagctcgac
cgacgcacgggcaagaagctggaggataatccccaggccctggtgtcgggagatgctgcc
acagtcagactggttcccatcaagcccatgtgtgtggagagcttcttcacataccctccc
ttaggtcgctttgcagccagagacctgaagcagacagtcgctgtcggcgtcatcaagtca
gtggtgaaggaccatgggtctaaaccactcaaagcccaagtgtgtaaatga
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