Hippoglossus hippoglossus (Atlantic halibut): 117754201
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Entry
117754201 CDS
T07778
Symbol
tmtopsb
Name
(RefSeq) teleost multiple tissue opsin b
KO
K04256
c-opsin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hhip01009
]
117754201 (tmtopsb)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
hhip04030
]
117754201 (tmtopsb)
Protein phosphatases and associated proteins [BR:
hhip01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117754201 (tmtopsb)
G protein-coupled receptors [BR:
hhip04030
]
Rhodopsin family
Vision
Opsin
117754201 (tmtopsb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srsx
MP_p6
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
117754201
NCBI-ProteinID:
XP_034428890
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Position
20:complement(17004526..17019985)
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AA seq
407 aa
AA seq
DB search
MFVSNLSLSCEHCPGGGAGGTAAADAYGEVPGTLPPPSLSPTGHLVVAVCLGFIGSVGFL
SNFLVLTLFCRYRALRTPMNLLLVSISTSDLLVCVLGTPFSFAASTQGRWLIGRTGCVWY
GFINAFLGIVSLISLAVLSYERYCTMMEPTMADARDYHAVLGGIAFSWLYSVAWTVPPLL
GWSRYGPEGPGTTCSVDWQTQTPNNISYIICLFIFCLVVPFIVMLYSYSKLLLAIRQVRS
SVVASRREQRVLVMVITMVVGYLVCWLPYGVAALTATFGSRDLLTPEATIMPSLLAKFST
VINPFIYIFMNKQFYRCFKAFLNCSVPERGSSLKTFSRATKTLRTGRQDKEHHMSAKGPS
ATAPNSIPGLSQGANHSAPSNRDSAVSRPPAADNPKPKLILVAHYRE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtttccaacctgagcctgagctgtgagcactgtcccgggggaggagccggcggc
acagcagcggcggacgcgtacggagaggtgcccggcaccctccctcctccgtccctgagc
ccgacggggcacctggtggtggccgtgtgcctcggcttcatcggcagcgtgggcttcctc
agtaacttcctggtgctcacgctgttctgccgctaccgggcgctgcgcacccccatgaac
ctgctgctggtgagcatctccaccagcgacctgctggtctgcgtgctgggaacccccttc
agcttcgcggccagcacccaggggcgctggctgatcggacgcacgggctgcgtctggtac
gggttcatcaacgcatttttgggcatcgtctccctcatatccctcgccgttctgtcctac
gagcgctactgcaccatgatggagcccaccatggctgacgccagagactaccacgccgtg
ctgggagggatcgccttctcctggctctactcggtggcctggaccgtccccccgctgctg
ggctggagcagatacgggcctgaggggcccggcaccacctgctcggttgactggcagacc
cagacgccgaacaatatctcctacatcatctgcctgttcatcttctgcctggtggtgccg
ttcatcgtcatgctgtactcctacagcaagctgctgctcgccatcagacaggtccggagt
tcggtggtggctagtcgccgagagcagcgcgtgctggtgatggtcatcaccatggtggtg
ggctacctggtctgctggctgccgtacggggtggcggctctgaccgcgaccttcgggtcc
cgtgaccttttgaccccagaggcgaccataatgccgtcgttgctggccaagttctccacc
gtcatcaaccccttcatctacatctttatgaacaaacagttctacaggtgtttcaaggca
ttcctcaactgctctgtccccgagcgaggctccagcctaaagacattttcccgggcgacc
aagacgctccgcactggccgccaggacaaggagcaccacatgtccgctaagggcccctcc
gccaccgcgcccaactccatccccgggttgtcgcagggggccaatcactcggctccatcg
aatcgagactcggctgtttcccgcccccctgctgctgacaaccccaaacccaaacttatc
ctggtggctcactacagggaataa
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