Hippoglossus hippoglossus (Atlantic halibut): 117754264
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Entry
117754264 CDS
T07778
Name
(RefSeq) phthiocerol synthesis polyketide synthase type I PpsD-like
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
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Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
KR
Ketoacyl-synt_C
PS-DH
KAsynt_C_assoc
PKS_DH_N
adh_short
PP-binding
CurL-like_PKS_C
adh_short_C2
Thiolase_N
ACP_SdgA_C
ADH_N
RhiE-like_linker
AA_synth
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
117754264
NCBI-ProteinID:
XP_034428982
LinkDB
All DBs
Position
20:16608424..16616050
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AA seq
2105 aa
AA seq
DB search
MEEAEDAIAVVGIGCNFPGGEGLDNFWKVLLDGRNCSLPIPKKRFDLSAWYDPDENKAGK
SRTAKAALIDGFNDFDHKFFGISDSEVEQMDPQQKQLLQCVYRALENAGIPMEEASGTRT
GVFLGLMNRDYETNAAHLHPSVINHWTGTGLAMSIAANRVSYIFNFTGPSLTIDSACSSS
LVALHLACQSIKQGDCEMALCGGVNCIFEPRVFVALSKAKMISPEGTSRPFSSTADGYGR
GEGCGVVLLKPLKKALQDHDHIWGIISKTAVNQDGHSVTPMTKPSMTQQEELLRGIYSDS
DLVNVQYIEAHGTGTPVGDPTEAGSISNAIAKAKPPGSERLWIGSVKSNIGHTESAAGVA
GLIKVLLMMKHETIVPSVFYSEETDSVDAKALNIKVPQKAEKWEPPGARIAGVNNFGFGG
TNAHAVVKQYKQSPIRQEHDETQPKYFVMSANSTKSLSLMMEDTVKQLEADSEVDLDSLL
YTSACRRSHLKHRYRKAIMVSSVVDLKDKLSAAVGKNISQAYSDPKLVFVFCGNGVTYHG
MCKQLLKQEPVFRSKIKEITELFKRLSGLNILDTLDSEFESSDFKNPEVVQPLLFATQVG
ITTLLRHWGVKPDAILGHSVGEVAAAHCSGLLSLEDAIKVIYFRSKLQSKVTGGMMLVIS
NMAVSEVTALLPSYSGRVCLAAFNSPQSCTLSGDADAIKSLHTELSASANGQNLFLRLLN
VPAAYHSHMMDPILTEIKDTIGLLQVNNLDTELFSTVTGKEVQQGDFCTGEYWARNIREP
VAFEQAVRLAAKGKKNTVFVEIAPRRALQRNIIESLTSDTAVLPSLQPGKDHETILSVVS
KLFELGVQVDWNTFYKGYETMPLPFPKYTFDCSDRDVIIGAAQANTPSNHPVLCQTGSES
NIFSCDLKSDSSFYLKEHKHNNIAIIPGAFYVELGLAAVMASAKPKVPLNSLKLTVNFHS
PCVLTQNSPDIKVKLEETKTETSFTVFSPSAVYASGTVVSKRERLIEEQSLSLSAIFKRC
KSVVSSQELYGYLSQGGFQYGDVFKNKGNVHYGEDLKEAFAVVTVPEELRSQLHDYYIHP
VVLDFLMQLLPVTVEHMFAGRPGFPAKIGSLTVFEPLQEEMIVYLRAVDVGLDHFEVCGC
FTDRDGRVLVEAKHVIIKYLGSHSHVVEEYFYHNSFSVIPDTIPSTPPPKALVFCDDMGI
SKGLQPHLDSKSQYIPVTHAKDILNNGFPSLLAKFNIQESKEKFDEVLFLWGQEDLTSQA
ADVALQKVVSCCEIFRQIVLELKQLHFPASIRAVTYRSSDVTVDHVNPGFAIVGMTRSFA
AEIPDLSFQLIDIDTVSAKDIAALSEVLLSYPCSKYPELVVKDGLIFKPSIVRTPPEVVD
SSGSSFTSTMSEHCILQTADAHEVTQVSAIHFDEGDLPISDRAVEIRPSTICVHSSDFFP
VSATHLEFGPTLYWDKHSSQSHKLLALDFNGTVTAVGKEVRKLKVGDHVASCYPVVAASK
VRVPEDVCYSTKRFPFLQKTPCVSYYVLAWEILHRALPRAKHHLGIISPVPDSALTKVLA
LTSSKSGWNVVIGTQCNGSFVDVKQIDAFVILPPLEESLIDKICSFPRVQHVVIICESET
QCLLARNMFHSVKESIHLQTILIPAILQKGSLSAQRPHIYHWLKSLKLNRKFAVKNFTFQ
NVKSDSLDTFHPQKPESYFNSKTLAVVALNKDDGSVLSEIPLLPTKKLLFKKRAVYIVAG
GLSGLGFETVKFISQRGGGYVVILSRSKPTPDLEQDIHNVENQCGNCITSMECDVSVSEH
VHRVISAIGQKFPGCPVRGVFHSAVVLHDGLIETLDRSLYEKVLKPKVKGVLNLHHATLQ
CQLHYFVCYSSISAFLGNASQTNYAAANTFLDMFCHYRRKLGLPGQSINWGALNLGLLLN
KDHFQQFLEAKGMMVLNVAEVHRSLEQCLLINQPQQAVCRFHFRNIRFNILSQNASLTMR
LSALVEDALQKSNETVAQAKEAECVSPKEYVISLLTETIGIDPSDLKDDSLLSSLGVDSM
QAMTLQNLIFQARGVNVPLVKLLDPNATLSTVVAVLSEGAEGENVSDAAVTSNSTKEMED
LSTRF
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggctgaggacgcaatcgcagtggtgggcattggatgcaattttcctggagga
gaggggcttgacaatttctggaaggttcttcttgatgggagaaactgttctttgccaatt
cccaaaaagaggttcgacttgtccgcctggtatgaccccgacgaaaacaaagcgggtaaa
tcccgcacagccaaggctgctctcattgatgggtttaatgattttgatcacaagttcttt
ggcatcagcgacagtgaagtggaacaaatggatcctcagcagaagcagctccttcagtgt
gtttacagagctttagaaaatgctgggattcctatggaggaggccagcggcaccaggaca
ggcgtgtttttaggcctaatgaacagagattacgaaacaaatgctgcgcacctgcacccg
agtgtgatcaaccactggactggaactggcctcgccatgagcatcgcagcaaacagagtc
tcatacatcttcaacttcaccgggccgtccctgaccatagacagcgcctgctcctcgtcc
ctcgtggctcttcatctcgcttgtcaatccattaaacaaggtgattgtgaaatggctttg
tgtggaggtgtgaactgcatctttgagccaagagtgtttgtcgctctcagcaaggccaag
atgatttcacctgaagggacgagcagacctttctccagcacggcagacggctacggccga
ggggagggctgcggggttgttctactgaaaccactgaaaaaggctttacaagaccacgac
catatctggggtatcatcagtaaaacagccgtcaaccaagatggacactcagtcactccg
atgaccaaaccctccatgacgcaacaagaggagctgctgcgaggaatctactcagactcc
gaccttgtaaatgttcagtacatagaggcccatgggactggaaccccggtcggagaccca
acggaggcaggaagcatctctaacgccatcgctaaggccaaacctcccggatcagagaga
ctgtggattggctcggtgaagagcaacatcggacatacagaatctgcagctggagtggcc
ggactcattaaggttcttcttatgatgaagcacgagaccattgttccgtccgttttctac
tctgaagaaactgacagtgttgatgccaaagccctgaacattaaagttcctcagaaggca
gaaaaatgggaaccgcctggtgcacgaattgcaggggtgaacaactttggctttggggga
acaaatgcacatgctgttgtcaaacagtacaaacagtcacccatcagacaagagcatgat
gagacgcaaccaaagtactttgtcatgtcagctaattcaacaaaatctctctctctcatg
atggaagacaccgttaaacagctagaggccgatagtgaagttgatctagattctctcttg
tacacgtcagcttgcagaaggagccatctcaaacatagatacagaaaagccatcatggta
tcatctgtggtcgatcttaaagataagttaagcgctgctgttggcaaaaatatcagccaa
gcctattccgatccaaagttagtgtttgtcttctgtggaaatggcgtcacttaccatggc
atgtgcaagcagctcctgaaacaagaacctgtcttcagaagtaaaatcaaagagattaca
gaactgttcaaaaggctgagtgggctgaacatcctggacacgcttgacagtgagtttgag
agtagtgacttcaaaaacccagaggtggtccaaccattgctctttgccacccaggttggc
attaccaccctactcagacattggggtgtcaagccagatgcgatacttggacactctgtg
ggtgaggtcgcagccgctcactgctctggcctcttgtctcttgaggatgcgataaaagtc
atctatttccgcagcaagctccagagcaaagtcactggcgggatgatgcttgtgatcagc
aacatggctgtatcggaggtaactgctcttctgccttcttactctggtagagtttgcctc
gctgctttcaacagtccacagtcctgcaccctctcaggggatgcagatgcaattaagagc
ctccatacagagctaagtgcctcagccaatggtcagaatctgttcctgcgtctgctgaat
gtcccggctgcttaccacagccacatgatggatccaattctgacagaaatcaaggacaca
attggcctcttacaggtgaacaatcttgacacagagttgttctcaacagtgacaggcaag
gaggtccagcagggagatttctgcacaggtgaatactgggctagaaacattcgtgagcca
gtggccttcgagcaggcagtgcggttggcagcgaaaggaaagaagaacacagtctttgta
gagatagcgccaagaagggcactgcagcgaaacatcattgaatctctgactagtgacaca
gctgttcttccctctctgcagccagggaaagatcatgagacaatcttgtctgtagtttct
aagctgttcgaactgggggttcaggtcgattggaacaccttctataaaggatatgagaca
atgccgctgcctttcccgaaatacacgtttgattgttctgacagagacgtgattatcggt
gcagcacaagcaaatacaccaagtaatcaccctgtgctctgtcagacaggaagtgaaagc
aacattttcagctgtgatttgaagtcagactcctctttctacctgaaagagcacaaacac
aacaatatagccatcatccccggtgccttctatgtcgagttgggtttagccgcagtcatg
gccagtgccaaaccaaaagtaccactcaactctctaaagctcactgtcaacttccacagc
ccgtgtgttttaacgcagaattcacctgacattaaggtgaaactggaagaaaccaagaca
gaaaccagtttcacggtattctctccatctgcagtttatgcatcaggcacagttgtttcc
aaaagagagcggctgattgaggagcagagcctttcactgagcgccatcttcaaaagatgc
aaatctgtagtgagctctcaggagctctatgggtatttgtctcaaggaggctttcagtat
ggagatgtcttcaagaataaaggcaatgtgcactatggagaagatctcaaggaggctttt
gcagttgtaacagttccagaggaacttcgatcgcagttgcatgactactacatccaccct
gttgtgttggattttctgatgcagcttctcccagtcacagtagagcacatgtttgctggt
agaccaggctttcctgccaaaatcggaagtttgactgtgtttgaacctttgcaagaggag
atgattgtgtatttgagagcagtcgatgtgggtcttgatcactttgaggtttgtggctgt
tttacagacagagacggcagagtgttggttgaggctaaacatgtgataatcaagtatctt
ggcagtcactctcatgtggttgaggagtacttctaccataactccttcagtgtcattcct
gacactatcccatctactcctcctcctaaggccttggtcttctgtgatgacatggggatc
tctaaaggcctgcaaccacatttggactccaaatctcagtacataccagtcacacatgca
aaggatattttgaataatggcttcccctccctcttggctaaattcaatatccaagagagc
aaggaaaagtttgatgaggtcttgtttctgtggggccaagaagacctcacttcacaggcc
gctgatgttgctcttcagaaagtggtgagctgctgtgagattttccgtcaaatcgtcctt
gagcttaagcaacttcactttccagcctctattagagcagtaacctaccgttcatctgac
gtcacagtagaccacgtaaatccaggttttgcaatcgttggtatgaccagatcttttgct
gcagagataccagatctttcatttcaactcattgacatagatactgtctctgctaaggac
attgcagctctgtctgaggtcctactatcatatccttgcagcaagtacccagagttggtg
gtaaaagatgggctgatctttaaaccttccattgtccgaactccgcctgaagtcgttgac
agttcaggatccagttttacctcaacaatgtccgagcattgcatccttcaaacagctgat
gcacatgaggttactcaagtgagtgccattcactttgatgagggggacctgccaattagt
gaccgagcagttgaaatccgtcccagcacgatttgtgtccattcatctgatttcttcccc
gtcagtgctacacacttggaatttggcccgacactgtactgggataaacattcctctcaa
agtcacaagctgctggctcttgatttcaacggtactgttaccgcagttggaaaagaagtg
agaaaactgaaggtgggagatcacgttgcttcctgctatcctgtggtggcagccagcaag
gtcagggtcccagaggatgtgtgctacagcacaaaacgattcccattccttcaaaaaaca
ccctgtgtttcctactatgtgctggcatgggagatcctgcatcgagccttacccagagcc
aaacatcatctgggaatcatatcccctgttcctgactcggctctgaccaaagtcttggca
cttacttcctccaaatctggctggaatgtggttattggaacgcagtgtaatggttctttt
gtagatgtcaaacagattgatgcatttgtcatcctgcccccacttgaagaatccttgatt
gacaagatttgcagttttccaagggtccaacatgtcgtcatcatctgtgaatctgagacg
caatgtttgcttgctcgaaacatgttccacagtgtgaaggaaagtattcatctgcagacg
attctgataccagccattttgcaaaagggatctttgagtgcccaaaggccacatatttat
cactggctcaaatccttgaagttgaacaggaaatttgctgttaaaaactttacctttcag
aatgtgaagtctgacagccttgatacctttcatcctcagaaaccagagtcgtacttcaac
tcaaagacactggctgttgtggctctgaacaaagacgacggcagtgttctgtcggagatc
ccactgctaccaacaaagaaactgcttttcaaaaagagggcagtttatatagtggcaggt
ggtctttctggtctgggctttgaaacggtcaagttcatctcccaaagagggggggggtat
gttgtcatactctcacggagcaagcccacaccagatctggagcaagatatacacaacgta
gagaatcagtgtggaaactgcatcacgagcatggagtgtgatgtgtctgtctctgagcat
gtgcacagggtcattagtgccattggccagaagttccctggttgtccagttagaggagtg
ttccacagtgccgtggtcctgcatgatgggctgattgagacccttgacagatcactgtat
gagaaagttctcaaaccaaaagtaaagggtgtattaaatttgcaccacgcaacactgcag
tgccagctacactattttgtgtgttactcctccatctctgcttttctgggaaatgcatca
caaacaaactatgcagcagccaacacgttcctcgacatgttctgtcattacaggcgcaaa
ctcgggctgcctggacagtccatcaactggggagcgctcaaccttggtctcctcttgaac
aaggaccatttccagcaatttctggaggcaaaggggatgatggtgctaaatgttgctgaa
gttcatagaagcttagagcagtgcctcctgatcaatcaaccccaacaggccgtttgcagg
tttcacttcagaaacatcaggttcaacatcctctctcaaaatgcatccttgaccatgcgc
ctgtctgcgttagttgaagatgctttgcaaaaatcaaatgaaacagttgctcaagccaaa
gaagctgaatgtgtctcgcccaaagagtacgtcatctctctgctcaccgagaccatcggc
attgatcccagtgatctgaaagatgactcacttctctcgtctttgggcgtcgactccatg
caggccatgactctgcagaacctgatcttccaggcgagaggagtgaacgtacctctggtg
aaactgttggaccccaacgccacattatcaacagtggtagctgtgctgagtgaaggagcc
gaaggtgaaaatgtcagtgatgctgcagtgacgagtaactccacaaaagaaatggaggat
ctttcaactagattttaa
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