Hippoglossus hippoglossus (Atlantic halibut): 117754537
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Entry
117754537 CDS
T07778
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117754537 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117754537 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117754537 (si:ch211-269e2.1)
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
tRNA_bind_3
NFACT_N
NSUN5_fdxn-like
Motif
Other DBs
NCBI-GeneID:
117754537
NCBI-ProteinID:
XP_034429319
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Position
21:15666062..15679606
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AA seq
1186 aa
AA seq
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MIPESTAAAASRSSEQMFFAIPSKKSHDEANSSGAVNHSEDESGNENQQKNVRRRKRAHK
GSENVKRKSARAGCSSVGRARGRRGKRRHVENVTLFEVITMGRSAMRAVIDDWIKAYVTD
RDSSLLDLISFFIQCCGCKGVVTAEMCQSREDSDVMSKMVEELDEVASLQYKKFLAFPWI
LTVTWPMDTDSVEYPLTQSGPYGRWFHSEFCDFVSVLVAQCQHSVIFDSYLMNTLISLLT
ELSNSYIRAFRHTCTLAAVKLLSALVGVALSLRVGIENSQKLYKVPKTKTTRQKLTPQLE
RIQKKIAELQGKRVEIESMMDIVFKGVFLKRYRDVLPEIRSICVEELGLWMKLYSSEFLN
DTYLKYMGWMMYDKIPDVRLKCVLGLQGLFGDPLLLPKLDLFTSRFKERMISMTLDKDNE
VSVQTMKLLLLISRTCDDVLSPDDYKQLLQFVYSSQRPLAAAAGELLYLRLLSSGAHTSD
SQDEINEEEARKLQTSARLKSLLQFHQESELHKHVVYLVDSLWDCGGALLKDWAALTSIL
LQEPSSHGPGLTLAEQALLVEILVASVRQASEGPALAGRSGAKKALNAREKKIQIDDCTK
LTEHLLTVLPKLLNKFSSSSDVVASLLRIPQFFIPECPEAENTQAVSSLMAELGAVLDFH
SSPAVVEAAARTYLSLCGEETSCGSVARDARDSLVQTWVDKLTVLLEDSLQVGDCFSADE
EKTGDILSTLRKLRAFHNCHDLSRWSLFQLLSPLLSAGGAPPEVLLEVLQCLCFIMIWSL
NVSSGTLTSREKAVAQRLQLRLFCERSHRCLSHSDHSVRHQAFLGVCDVLVAHSYQTHVW
DPTSFGPLLHTPSPKLQRALSTFVCMHVFVGPDCDSQSRVSEGSEVERLEDLHRRRNLLA
AFCKLIVHGVLEMSTAAEVFMYYTKYYNDFGDIIKETMYRARQTDKIESSRTLVLCLQQL
FVRLKKEQESGGRAQAGVQTFTSIKELARRFALTFGDPVKFRECVVMMHRTGIEFVFQEF
NQTPETPTPPLLSYLTILSEFSSKLLKPDKKTVFMYLQKHTAELFINLRDECWQPLVYYR
ASLLTAAEGEDAVSYVSSDRKPCPPNRSPFSKQKLEGSKSPCLFSPVDSKVSKGHRSKFS
PSHQEKTTDVDPFSLPLEPAARDLNPEGFVLSSSNEAEDDTVEIEL
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgagtccacagctgcagctgcgtctaggtcctcagagcagatgttttttgcg
attcccagtaagaaatcgcatgatgaggctaactcctctggtgctgtcaatcattccgag
gacgagtcgggaaacgagaatcaacaaaagaacgtgagaagaaggaaaagagctcacaag
ggctcagagaatgtcaaacgcaaaagtgccagagccggctgcagcagtgtgggcagagcg
agaggccgccgcggtaaacggagacatgtggagaacgtcaccctgttcgaggttatcact
atgggcaggagtgccatgcgggcggtgatagacgactggattaaggcttatgtgacggac
agagactcgtctctcctcgatctcatcagcttcttcatccagtgctgtggatgcaaaggt
gtggtcacagcagagatgtgtcagagcagagaggacagtgatgtgatgagtaagatggtg
gaggagctggacgaggtggcgagtctgcagtataaaaagtttctggcctttccgtggatc
ctcacagtgacgtggcccatggacacagacagtgtggagtatcccctcacacagtcaggt
ccgtacggtcgctggttccactccgagttctgtgacttcgtgtcggtgctggtggctcag
tgtcagcacagcgtcatcttcgacagttacctgatgaacacgctgatctcgctgctcacg
gagctgtcgaactcttacatacgggccttcagacacacctgtacgctcgcagcggtgaag
ctgttgagtgctctggtgggcgtggctctgagcctgcgtgtcgggattgaaaacagtcag
aaactgtacaaggtgccgaagacaaagaccacgcgtcagaaactcactccgcagctggag
agaatacagaagaagatcgcagagctgcaggggaagagggtggagatagagagcatgatg
gacatcgtctttaaaggggtttttctcaagagatatcgcgatgtgcttccagaaattcgc
tctatctgtgtggaggagttgggtttgtggatgaagctctacagttctgaattcctgaac
gacacctacctcaaatacatgggctggatgatgtacgacaaaataccagatgtgcgtctc
aagtgtgtgttaggtttgcagggtttgtttggggatcctctgcttctccccaaacttgac
ctgttcaccagccgcttcaaggagcggatgatctccatgacgctggataaggacaatgaa
gtgtcagtacagaccatgaagctgctgcttctcatctccagaacatgtgatgatgtgctg
agtccagacgactacaagcagctgctccagttcgtttactcctcacagcgacctctagca
gccgccgcaggggagctgctctacttgaggcttctcagctctggagctcatacgtctgat
tcccaggatgaaataaatgaggaggaggcacgtaaactccaaacttctgccagactgaag
tctctgctgcagtttcaccaggagtctgagctgcacaaacacgtagtgtacctggtggac
agcctgtgggactgtggcggagctctgctgaaggactgggctgcactcacgtccatactg
ctgcaggaaccgtcctcacacggtccaggtcttacactggcagaacaagcactgctcgta
gagatcctggtggcgtcggtgcgtcaggcctcagagggaccagccctggccggcagaagt
ggagcaaagaaggcattgaacgccagagaaaagaagattcagatcgatgactgcactaaa
ctcaccgaacatctcctcactgttctcccaaagctactgaataagttttcaagtagctca
gacgtcgtggcctccctgttgaggattcctcagttcttcatccctgagtgtcctgaggct
gaaaacacacaggcggtttccagcctgatggcagagctgggagctgtgttggacttccac
tcgagccccgctgttgtggaggcagcggctcgcacgtacctgagtctgtgtggagaggag
acgtcctgtggctctgtggcgcgggacgccagagactctctggtccagacctgggtggac
aaactgacagttctgctggaggactcattgcaggtgggcgactgtttctctgctgatgag
gagaaaactggagacattttatccacactgaggaaactcagagctttccacaactgccac
gacctctctcggtggagtctgttccagctgctctctcctctcctgtcagcgggaggagct
ccacccgaggtgctgctggaggttctgcagtgtctgtgtttcatcatgatctggtccctc
aacgtgagcagtggaactctgacatccagagagaaggctgtggcccagaggctccagctg
cgcctgttttgtgagcggagtcatcgctgtctctctcactccgaccacagcgtccgacat
caggctttcctgggtgtgtgtgacgtcctggtggctcattcctaccagacccatgtgtgg
gatcccacctccttcggtccgctgctccacacgcccagtcccaaactgcagagggcgctg
tcgacctttgtatgcatgcacgtctttgttggcccagactgtgacagtcagagcagagtc
agcgaaggctccgaggtggagaggctggaggaccttcacagacggagaaatctgctggcg
gccttctgcaaactgatagtgcacggggtgctggagatgagcacggcagctgaggtcttc
atgtattacacgaagtattataacgactttggagacatcatcaaggagaccatgtacagg
gccagacagacggataagatagagagttctcgcacactagtcctctgcttgcaacagctg
tttgtgcgacttaaaaaggagcaggagagcggtggcagggctcaagcaggagtccagacc
ttcaccagcatcaaggagctggccaggcgcttcgccctcaccttcggggaccccgtcaag
tttcgggagtgcgtcgtcatgatgcacaggacggggatcgagtttgtgttccaagagttt
aaccagaccccagagacaccgacgccaccgctcctctcgtacctgaccatcctcagcgag
ttctccagcaaactgctcaaaccagacaagaagacggtgttcatgtacctgcagaaacac
acagcggagcttttcataaacctcagagacgagtgctggcagccgctcgtctactatcgt
gcttccctactgactgcagctgagggggaggatgctgtgtcctatgtcagctctgacagg
aagccctgcccgcccaatcgctctcccttctccaaacagaaactagaaggaagtaagtct
ccctgcctgttcagccctgtcgactccaaagttagcaaaggtcacagatctaaattcagt
ccaagtcatcaggagaaaacaacagacgtggatcccttttctcttccactggaacctgct
gcacgagatctgaacccagaggggttcgtcctcagctccagcaacgaggcggaggacgac
actgtggagatcgaactttga
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