Hippoglossus hippoglossus (Atlantic halibut): 117754652
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Entry
117754652 CDS
T07778
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04382
Cornified envelope formation
hhip04510
Focal adhesion
hhip04512
ECM-receptor interaction
hhip04514
Cell adhesion molecule (CAM) interaction
hhip04518
Integrin signaling
hhip04810
Regulation of actin cytoskeleton
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117754652 (itga6a)
04514 Cell adhesion molecule (CAM) interaction
117754652 (itga6a)
04518 Integrin signaling
117754652 (itga6a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117754652 (itga6a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117754652 (itga6a)
04810 Regulation of actin cytoskeleton
117754652 (itga6a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117754652 (itga6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhip04147
]
117754652 (itga6a)
04515 Cell adhesion molecules [BR:
hhip04515
]
117754652 (itga6a)
04090 CD molecules [BR:
hhip04090
]
117754652 (itga6a)
Exosome [BR:
hhip04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117754652 (itga6a)
Exosomal proteins of breast milk
117754652 (itga6a)
Cell adhesion molecules [BR:
hhip04515
]
Integrins
Integrin alpha subunits
117754652 (itga6a)
CD molecules [BR:
hhip04090
]
Proteins
117754652 (itga6a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
FG-GAP_2
Integrin_alpha
CHIPS
Ribosomal_L44
Motif
Other DBs
NCBI-GeneID:
117754652
NCBI-ProteinID:
XP_034429587
LinkDB
All DBs
Position
21:13051133..13070948
Genome browser
AA seq
1086 aa
AA seq
DB search
MLLHGGLSPVSSVLIIHLLQTTAVLAFNLDTGHVIRKDGEPGSLFGFSLAMHRQLNPDKR
MLLIGAPRARALGKQRANITGGLYKCEISLSNDCERIEFDIEEDVRIENKENQWMGVTVQ
SQGPGGKIVTCAHRYQRRLFANTAQESRDITGRCYVLSQDLTIDAASDEDGGSWNFCAGR
PRGHEMFGSCQQGLAATFTKDYHYIVFGAPGAYYWKGIVRLEQKNNTLLEMGVYDDGPYE
VGDEQYWNPDLVPVPANSYLGFSLDSGHSITRGRSLTVVAGAPRANHNGAVVLLKKGGEA
SSRLSVEHTLDGPGLGSSFGYDVAVVDLNSDGWQDIVVGAPQFYMKDRDVGGAVYVYINK
AGRWETITPIRLDGTKDSMFGLAVRNIGDINQDSYPDIAVGAPYDDGGAGKVYIYHGSAE
GIDTSPAQILSGKDHQLQLFGYSLAGNMDLDSNSYPDLAVGSLSDTALIYRARPIISIRR
DVKISPREIDLTIKTCGNSICFTVDACFTYTANPASYSPRLTISYSVEADGDRRKQGLTS
RVMFMNKSHSDTDYLFNGTLDLRGQKQETCIKIKATLKDNIKDKMRSIPIELSAEIVGTK
RQKSRNGLPQLMPILDSSQSSKEVIEVNFVKEGCGSDHICRSNLKMEYKLFYRQNNMHTP
LHVKNNVPVFHLNYERKDLALRVTVNNMNGDDAYEAKLVGTFPDTLSYSGVRSQQTMPII
CIANQNGSQADCELGNPFKRDSETTFFIILSTVGMSLDTTEIDIDLQLHTTSVQRNIIPV
KVKAQVVIELPLSVSGEASPNQVSFGGVVKGESAMKTEEEIGSLINFTFRINNLWKSLTP
SVKASLHIQWPKFNKDGKWLLYVVKITATGEEDVRCSPESEINYLKHIQESSVSRTKREI
ERKQRKAGGKKSILLEKKKVLTCENGLKCVVLKCPLQGLDGTTIELRSRLWNSTFIEDYA
SVSTLHIVVKAFLVLHAQAENMILTTPDTDVTLAVSPESAVAQYVGVPWWIILVAVLAGI
KILALLVFLLWKCGFFKRSKQDSSVPRYNAVRIRKETPEYKDGKVKLDAFDKKQWMTSWI
DNESYS
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcacgggggactctctccggtctcctctgtgcttattattcatcttctgcag
acaactgcggtgctcgccttcaacctggacaccggtcatgtcatcaggaaagacggggag
ccgggcagtctgttcggcttctctctcgccatgcaccggcagctcaacccggataaaaga
atgctgttgatcggggctcccagagcaagagctttaggaaaacagagagccaacatcaca
ggagggctttataaatgtgaaatctctctgtccaatgattgtgaacgcattgaatttgac
attgaagaggacgtacgtatcgagaacaaggagaatcagtggatgggggtgacggttcag
agccaaggacctggaggaaagattgtgacgtgtgctcatcggtatcagaggcggttgttt
gcgaacaccgctcaggagtcccgtgacatcactgggcgctgttatgtcctgagtcaggac
ctgacaatcgatgcggcctccgacgaggacggaggtagctggaacttctgtgcgggcaga
cccagaggccacgagatgtttggatcatgtcagcagggcctagctgccaccttcaccaag
gactaccattacatagtgtttggagcaccaggagcttactactggaaaggcattgtccga
ttggagcagaagaacaacacactgctagagatgggcgtgtatgatgacggcccgtatgaa
gttggagatgagcagtactggaaccctgatctggtgcctgtacctgccaacagctacctc
ggattctcccttgattcgggacacagcatcaccaggggtcgcagcctgacggtggtggct
ggagccccccgagccaatcacaatggagctgtggtcctgctgaagaaagggggggaagcc
tcctccagactctctgtggagcacactctggacgggccggggctggggtcctccttcgga
tacgacgtggctgtggttgacctgaacagtgacggatggcaggacatagttgtaggagcc
cctcagttctacatgaaggacagagacgtgggaggggctgtgtacgtgtacatcaacaag
gcggggaggtgggagacgatcacgccgatccgtctggatgggaccaaagactcgatgttt
ggactggcagtgcggaacattggagacatcaatcaagactcatatccagacattgctgtc
ggagctccttatgacgacggcggggcaggaaaagtttacatttatcacggctctgcagag
gggatcgacacaagccctgcacagatcctctcaggaaaagaccaccagctccagttattt
ggttattctctggcaggaaacatggacctggacagtaattcgtatccagacctggctgtg
ggctctctgtctgacaccgctctaatttacagggcccgaccaatcattagcatcaggaga
gatgtcaaaatatctccgcgggaaattgaccttacaatcaaaacctgtggtaacagcatt
tgcttcacagtggacgcatgcttcacctacacggccaacccagcgtcttacagccccaga
ctgactatcagctattctgtggaggcagacggagatcgcaggaaacagggattgacctcc
agggtgatgttcatgaacaaatcccactcggacacggactacctgtttaacggcacctta
gacctgcgtggtcaaaaacaggaaacgtgcatcaagataaaagctacactcaaggacaac
attaaggacaagatgcgcagtattcctatcgagttgtctgcagaaattgtgggtacaaag
cgacagaagtcaaggaacggcctccctcagcttatgcccattttagactcctctcaatcg
agcaaggaagtcattgaggtgaactttgtaaaagagggatgtggaagtgatcacatttgt
cgcagtaacctgaagatggagtacaaattattctacagacaaaacaacatgcatactcca
ctacatgtcaagaacaacgtccccgtgtttcacctgaactacgagaggaaggacttggct
ctgcgggtgacggtgaacaacatgaacggagacgatgcctatgaggcaaagctggtggga
actttcccagatacactgtcgtattctggagtccgctcccaacaaacaatgccgatcatc
tgtattgccaatcagaacggctctcaggccgactgtgagctgggaaatccttttaagaga
gactcagagacgacctttttcatcatcctgagcacggtgggcatgagtctcgacacgaca
gagattgacattgacctgcagctccacacgacgagtgtgcaaagaaatataatccctgtg
aaagtaaaggctcaggtggtgattgaactaccgttgtccgtcagtggggaggccagccct
aatcaggtttcttttggaggtgttgtgaaaggagaaagtgccatgaagacggaggaggag
atcggaagcttgattaactttacattcagaataaacaacttatggaagtccctgacgcct
tctgttaaagcctccctgcacattcagtggcccaaattcaacaaagatgggaaatggctg
ttgtatgtggtgaagatcacagcgacgggagaggaggacgtccgctgctctcctgagtct
gagatcaactatctcaaacacatccaggagtccagtgtgtcccggacaaaacgagagatt
gagagaaaacagagaaaagctggtggaaaaaagtctatattgttagagaaaaaaaaagtg
ttgacctgtgagaatgggctcaaatgtgtggtgctcaagtgccccctgcagggcctggac
ggtacaacgattgagctgaggtctcgtctgtggaactcgacctttattgaggattacgcc
tccgtttcgaccttacatatagtggtgaaggccttcctcgtgcttcacgctcaggctgaa
aacatgatcctcacaacccctgacactgatgtgacactggccgtgtctccagaaagtgca
gtggctcagtatgtaggtgttccctggtggatcatactggtggctgttctcgcaggaatc
aagatcctggctctgctggtgtttctgctctggaagtgtggattcttcaaacgctccaaa
caagacagcagcgtccctcgttataacgcagtgcggatacgaaaggagactccagagtac
aaagacggaaaggtcaagcttgacgcctttgacaaaaagcagtggatgacgtcttggatc
gacaacgaaagttactcatga
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