Hippoglossus hippoglossus (Atlantic halibut): 117754666
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Entry
117754666 CDS
T07778
Name
(RefSeq) alsin-like isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117754666
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
117754666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RLD
RCC1
DH_Alsin
RCC1_2
MORN
PH_alsin
VPS9
Alsin_RLD
PH
HA_Alsin
SOS1_NGEF_PH
PH_16
RHG20_PH
RhoGEF
Motif
Other DBs
NCBI-GeneID:
117754666
NCBI-ProteinID:
XP_034429623
LinkDB
All DBs
Position
21:8277135..8301488
Genome browser
AA seq
1642 aa
AA seq
DB search
MENREERPAYEQVPTPPERGLLHIWQSAGPIEELSLGRVLLSRPVLQVTLGEHHGLLLTQ
GSQVYSFGELLWRDLSIPLSAPVLEESLLGKSVVRVAAGGFHCGALSEQGNVYMWGENTA
GQCGLTEKGTVTNITVSEPCLVSVVDSEVVPPAVVRVMDLACGREHSLALSSQNELWAWG
SGCQLGLVTNNFPVWRPQKVEHLAGRHVIQVACGAYHSLALVRSLLPQNNNTLRPPEKKE
RGQSPHSSVTEREESLTADDAHYCPLGVELSEVLIGETTPRRRGPRRRLHPVGRSAGSSP
GSGSFPYSGDGKSSTAQKLPELDGHADHLTQTDGRPVSHPLPCWGANKNSAFPDEMELQN
ILQKLSGHSLETQPINGPGDTDSLSSHTSDDSCVSSTPSTDLLISSNSGVSGPYSSSPVC
LEEVRLCLEAEKKGLQGQKSSSLTNIHQKGKTAGNRRCSLPGTPTHGRNGSPRRRRPCPC
KPSSASRTQAAASEDAGDGLPSLETEVWSWGRGSEGQLGHGDQLARLQPLCIKSLTGEEV
IKVSAGSHHSLALSAQCTVYSWGSNMCGQLGHVNSPVTVPQQAKLSDGLRIWDVSAGQSH
SLLLADGDCVQPILLYCGQHQESLSARRETSHQSQRSCQRSPSRAEIYSVRPTLLPLCME
MGYISSVSCGGQSCAVLADQNVMGFISAIHELASRERHFYCWLSNTRKLLLTPLRNREGA
CPTLGEPCTHLFFSLCESFVRLSILIGRHATSLSYFLHDVQGADVKSLPLLTHTDDFLVI
YKEYCFALGNFHVMGGFQSLHKLSLEVLGSQQSLLARLCVPDQSVSGDTDLVSLLYWPLQ
QLHQYSRVLLKLGSCYDVLTEEYQCLHQGCRHYESLSLSLLRRKKEAETTFLFWKSHSGK
NTEVLRLPQRRVVCESSNRSLTLQKAGRFSNHWFILFNDALVHTQNAIPSQNFFSTHHVY
PLTCLWVKPVTEDTRGLYAIKITCPEESFTLVASTPQEKNKWLRSLNQAVDQVLGGGGQG
SSPGVTAISRTATYTFTGEGSFKDAHYTGGWLAGRVHGRGTMKWPDGQTYTGNFKNGLED
GYGESVMPNKVLNKPDGYQGQWRDGKIQGFGKYKYASGQVYEGCFYEGQRQGYGMLSSGK
QARTSSSVFIGQWVQDRKTGYGVYDDITRGEKYMGMWLDDQRNGQAVVVTQYGMYYEGTF
KENKMIGPGLLVSDDDTAFHGEFADDWTVNGKGVLSLANGDCLEGLFSGEWSTGLKVVGT
YTKPAADEPDNKERNSLFRLGQYLVPSAQRWGCVFTECWSRLGCAAAGRGERTIAWENIA
VTITTAQRHSPNLSRSQSKALESLEFIPQQGEAVTTANFDNIRRYLIKACETPIHPLGWL
VETLITVYRMTYVGVGSNRRLLRQAVQEVQAYLTHFFSLVRFLFPGLPDDGCIIPDPPAS
PSKSRHNSNTEGVVVVSCSSLLLPLLLPRLYPPLFTLYSLQEEPEEAQYWERIIRLNKQP
DQSLLSFLGVQEKFWPVWMSILGEKKQIVSSSKDACFVSAVETLQQISTTFTPSDKLLVI
QKTFEELTQEVKPMLEGNFLWCMDDLLPLFLYVVLRARIRNLGAEVSLIEDLMDPNVQHG
EMGLMFTTLKACYIQIQHESTL
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagagaggagaggcctgcatatgagcaggtccccacacctccagagcgagga
cttctccacatctggcagtcagcggggcccattgaggagctctctctagggagagtgctg
ctttccaggcctgttctgcaggtcaccctgggagaacaccatggactcctgctgacacag
ggcagtcaggtgtattctttcggggagctgctatggagggatctgagcatcccgttgtct
gctccggtgctggaggagtcgctgctggggaagtcggttgtgcgtgtggcagccggcggc
ttccactgtggagcgctgagtgagcagggcaatgtgtacatgtggggggagaacactgca
ggacagtgtggcctgactgagaagggcactgtcacaaacatcacagtttcagagccatgc
ctggtcagtgtcgtggacagtgaggtcgttcctccagcggtggttcgggtcatggatctg
gcctgtggacgggagcacagcctggctctgtcgtcccagaatgagttgtgggcctggggc
agtggctgccaactcggcctggtcacaaacaacttccctgtgtggagaccacagaaggtg
gagcacttggctggcagacatgtaattcaggtggcttgtggtgcctaccacagcctggcc
ctggttcgcagtttacttcctcagaacaacaataccctgaggccccctgagaagaaggag
cggggccagtcacctcacagctcagtgacagagagggaggaatcgttaacagctgatgat
gctcactactgtccgctgggggtggagctgtctgaagttttgataggggagaccactccc
aggagaagaggtcccagacgacggctccatcctgtggggaggtcagctggcagcagccct
ggctctggctcattcccatattctggagatggaaaatccagcactgcacagaagttaccg
gagttagacggacacgccgatcatctaactcagactgacggccgccccgtgtcccaccct
ttgccttgctggggggccaataagaactcagcttttcctgatgagatggagctccagaac
atcctgcagaaactctctggtcactcgttagagacgcagcccatcaacgggccgggagac
actgactcactgagcagtcacacgtcagatgacagctgtgtttcctcaactccttccacg
gatcttctcatttccagtaacagtggagtgtctgggccgtactcctcctcccctgtgtgt
ttggaagaagttcggctctgtctagaggcggagaagaaggggctgcaggggcagaagagc
tccagtcttacaaatatacatcagaaggggaaaacggcaggaaacaggagatgctcactg
cctggaacacccacccatggtaggaatgggtccccacggcgacggcggccatgtccctgc
aagccatcctctgctagtcggacccaggctgcagcatcagaggatgcaggagacgggttg
ccgtctctggagacagaagtgtggagctggggccgcgggtctgaggggcaactgggtcat
ggagatcagcttgctagactccagcctctgtgtatcaagtctttgacaggcgaggaagtg
attaaagtttctgcaggatcccaccattcactggctctcagtgctcagtgcacggtgtat
tcatggggcagcaacatgtgtggacagctgggccatgtcaacagccctgtcacggttcct
cagcaggcgaagctgtctgacggtctccggatttgggacgtgtcagccggtcagagccac
tcccttctgctggctgacggagattgtgtccagccgatcctgttgtactgcggccagcat
caagagtctttatcagcgcggagggagacgtcacaccagagtcaacggtcatgccagagg
tcacccagcagggcggagatttattcagtcagacccaccctgctccccttgtgcatggag
atgggttacattagcagtgtgtcctgtggtgggcagagctgtgcggtgttggcagaccag
aatgtcatgggcttcatctcagcgatccacgagctggcctccagagagagacacttctac
tgctggttgagcaacaccaggaagctgctcctcaccccgctacgcaacagagagggtgcg
tgccccacgttaggtgagccgtgcactcatctcttcttctctctctgtgagagttttgtt
cgcctgagcatcctgattggccgacacgccacgtcgctcagctacttcctgcatgatgtg
cagggcgctgatgtcaagtcccttcccctgctgacacatactgatgacttcctagtcatt
tataaagagtattgttttgcacttggaaacttccacgtgatggggggattccagtcactc
cataaactctcacttgaggttttaggttctcagcagagcctgctcgcccggctgtgtgtt
ccagatcagtccgtcagtggtgatactgatctggtttcgttgctgtactggcctctgcag
cagctccaccaatacagccgagttctgctcaaactgggatcctgttacgatgtgttaact
gaggagtatcaatgcctccatcagggctgcagacactatgagtccctgtctttgtccctg
ctgaggaggaagaaagaagctgaaaccacatttctcttctggaagagccactctggaaaa
aatacagaggttctgcgtctcccgcagcgtcgcgtcgtgtgtgaaagcagcaacagatcc
ctcactctgcagaaggccgggcggttctctaaccactggttcatactgttcaacgatgcc
ttggtgcacacacagaatgccattccctctcaaaactttttctccacacatcacgtctac
cctctgacctgtctgtgggtgaaaccagttactgaagacaccaggggactctatgccata
aaaataacatgtccagaagagagtttcaccctggttgcctcaacaccacaggaaaagaac
aagtggctacgatctctaaaccaggcggtagatcaggtgctgggtggtggaggtcagggc
tcatcgcctggggtgacggcaatatctcgtacagccacctacacgttcactggagaagga
agttttaaagacgcccattacaccgggggctggctggcaggacgagttcatggcagagga
accatgaagtggccggatggacaaacttacactgggaactttaagaacggactggaggac
ggctatggggagagtgtaatgcctaacaaagtgctgaataagccagacggctaccaagga
caatggagagatggcaagatccaaggtttcggcaagtacaagtatgccagtggccaggtg
tacgagggctgtttctatgaagggcagcggcagggttacggcatgctgagctcgggtaaa
caggccaggacctcctccagcgttttcattggacagtgggtccaggacaggaagacagga
tatggagtctacgatgacatcaccagaggtgagaagtatatgggtatgtggctggacgac
cagagaaatggccaggctgtagtcgtcacccagtacggtatgtactatgaagggaccttc
aaagagaacaagatgattggtccagggctgttggtgtcagatgacgacacagctttccat
ggggaatttgctgatgactggactgtcaatgggaagggtgttttgtccctggctaacggt
gactgtctggagggactgttcagtggagagtggagcacagggctgaaagtggttggaact
tacaccaaaccagcggctgatgaacctgacaataaagagagaaacagcctgttcaggttg
ggtcagtatctggtgccgtcagctcagaggtggggctgtgtgtttactgagtgctggagt
cgactgggctgtgctgcagctgggagaggagagaggactatagcctgggagaacatcgca
gtcacaataacaactgcacaacgacacagtccaaacctcagtaggtctcagagtaaagca
ttggagagtttggagtttattccccagcaaggagaagctgtcaccactgcaaactttgac
aacatacgaagatatctcatcaaggcatgtgagactcccatccaccctctgggctggctg
gtggagacgttgataacagtctacaggatgacttatgttggagtgggatccaaccgcagg
ctgctgagacaggctgtccaggaggtccaggcttacctcacccatttcttcagccttgtc
aggtttctttttcccgggttacctgatgatggctgcatcatcccagacccccctgcctct
ccatccaaaagcagacacaactctaacacagaaggcgttgtggtggtgagctgctcgtct
ctgctcctcccgttgctgctccctcgactctaccctcctctctttaccctgtattccctg
caggaggagccggaagaggcccagtactgggaacgcatcatccgactcaacaagcagccc
gaccagtccctgctcagcttcctgggagtgcaggagaagttctggccagtgtggatgtca
attctaggagaaaaaaagcagattgtgtccagcagtaaagatgcctgctttgtttccgct
gtagagacactccaacaaatcagcaccactttcactccttcagataaactcttggtcatc
cagaaaacgtttgaggagttgacccaggaagtgaaacctatgctggagggtaatttcctg
tggtgcatggatgacttgctccccctcttcctctacgtggtcctcagagcgaggatcagg
aatttaggagctgaggtcagtctgatagaagatctgatggatcccaacgttcagcatgga
gagatgggtcttatgttcacaacacttaaggcctgctacatccagatccaacatgagtcc
actttgtag
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integrated database retrieval system
