Hippoglossus hippoglossus (Atlantic halibut): 117754719
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Entry
117754719 CDS
T07778
Symbol
itga4
Name
(RefSeq) integrin alpha-4 isoform X1
KO
K06483
integrin alpha 4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04510
Focal adhesion
hhip04512
ECM-receptor interaction
hhip04514
Cell adhesion molecules
hhip04672
Intestinal immune network for IgA production
hhip04810
Regulation of actin cytoskeleton
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117754719 (itga4)
04514 Cell adhesion molecules
117754719 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117754719 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117754719 (itga4)
04810 Regulation of actin cytoskeleton
117754719 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117754719 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhip04147
]
117754719 (itga4)
04515 Cell adhesion molecules [BR:
hhip04515
]
117754719 (itga4)
04090 CD molecules [BR:
hhip04090
]
117754719 (itga4)
Exosome [BR:
hhip04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117754719 (itga4)
Exosomal proteins of other cancer cells
117754719 (itga4)
Cell adhesion molecules [BR:
hhip04515
]
Integrins
Integrin alpha subunits
117754719 (itga4)
CD molecules [BR:
hhip04090
]
Proteins
117754719 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
Integrin_alpha
DUF11
GNVR
Motif
Other DBs
NCBI-GeneID:
117754719
NCBI-ProteinID:
XP_034429748
LinkDB
All DBs
Position
21:complement(15546421..15568492)
Genome browser
AA seq
1033 aa
AA seq
DB search
MYPSAVGVCARCSLFLVLVQVLVQFLVLVCPAAGYSLDQEHSLEFSGPSSSMFGYSVLLH
RHKTHKWLVVGAPVANSSSNPTVQSPGAIFRCNITAETQHCQHMHADVSKCGKTCEAESD
HQWLGVSLSRQPGDNGGHILACGHRWKNVFYSKKDSQNNKLPNGVCYRYGSDLRHGQPMI
PCYRDHQRKFGEDYGSCQAGISNFLTEDLIIMGAPGTSYWTGSVLVFNTSSRGMSVYLDD
EAGTVSFGSYLGYAVGAGHFLSPATLEVVGGAPQYNQRGKVFILTVDNSLLRVISNVSGK
ELGSYFGSSLCAVDLNADGLSDLLVGAPLATGAAREEGRVHVYINQGQANMLEAEFQLTG
SDAYAARFGETIADLGDLDDDGYHDVAIGAPHEDDLKGAVYIYNGRKEGISPTPSQRITG
STLGRDLRMFGQSLSSGIDIDDNGYQDVAVGAFLSDAAVVLRTRPVIQVKASLTLPEQID
QQVALCREHNTPTVCFNVTVCFSVWSRHFRGAIDLQYNLTSDLLHKPSFPHRFDFHGNGS
SNSTRGHVKARHGQLTCTTHVAFQRKDVRDIFTPVQFEVSYGLRETSTHKASSRTFPPLK
PILQQGTGHQNTITNQTQFARSCSLVNCSTNMQLSAVLVLPHQQQYFALGSGQTIMLKTS
MVNSGDDAFLPRLMLYFPNNIHYIKVLQNQDNLVSCDVTQEINSTMVLVDCSVTSLLLPA
QSQLNINFLLDVNQNSTSGDIDIHVNTSSDNYERAEYLHDNSLSLLLPLKYGVNINIHGF
VTPTSFVFGDEDLTPVDCYAETFNYTYKVLNSGPSRSIDTVVEIALPKILTPYRHRLLQV
IDWQSSHGVCSISDTTVSVIEDCDVPQASFIKQLIFFFSSISTRRLFCGRGDELCERLVC
RLGNLEAGRDATIQLETRLNPAVLLQAPGRHGIMRLESTAMMSSPREDPHTILIQKPAVQ
VVVEALFTQKPTTTVKVFIIVVSLVLGLMILAALIWCLWKAGFFKRNLHKKEEEFRRHSW
DYVPKSNERESFS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtatccctccgctgtcggtgtgtgtgcgcgctgcagcctgttcctggtcctggttcag
gtcctggtccagttcctggtgctggtctgtcctgctgcaggatacagtctggatcaggag
cacagtttggagttcagtggtccctcctcctccatgtttggatactcagtcctgctgcat
cgccacaaaactcacaaatggttagtggttggagctccagtagcaaactcatcctccaat
ccgacggttcaatctccaggagccattttccgctgcaacatcactgcagagacgcagcac
tgccaacacatgcatgccgatgtgtcgaaatgtgggaagacgtgtgaagcagaaagtgat
caccagtggctgggagtcagtctgtccagacaacccggagacaatggaggacacatcctg
gcgtgtggtcaccgctggaagaacgtcttctactcaaagaaggacagtcagaacaacaag
ctgccaaacggagtgtgttatcgctatggcagcgacctgagacatggtcagcccatgatc
ccctgctacagagaccaccagaggaagttcggggaggattacgggtcatgtcaggctggt
atctcgaatttcctgacagaggatctgatcatcatgggggctccagggacgtcttattgg
acgggttcagttctggtcttcaacacgtccagtcgagggatgtcagtgtacctcgatgat
gaagctggaacagtcagcttcggaagctacctgggttacgctgttggagctggtcacttc
ctgagtcctgctacactggaggtggtgggtggagctccgcaatataaccagagaggaaag
gtcttcatcctcaccgtagacaacagtttgctgcgggtcatctctaacgtgtctggaaaa
gagctgggatcatactttggctccagtttgtgtgcggtggatctgaacgctgatggtttg
tcagatctgttggtcggcgctcccttggcaactggggccgccagggaggagggacgagtg
cacgtgtacataaaccaggggcaggcgaatatgttggaggcggagtttcagctgactggc
agtgatgcctatgccgctcggtttggagagaccatcgctgaccttggagacctggatgac
gatggttaccatgatgtggcaatcggtgccccacatgaagacgacctgaaaggagctgtc
tacatctataatggcagaaaggagggaatctcaccaactccatctcagagaattactgga
tccaccctgggtcgcgacctcaggatgttcggccagtcgctcagctctggcattgacatc
gatgataatggctaccaggatgtggcggtcggtgcattcctctcggacgcagctgtggtt
ctcaggacccgtccagtgattcaggtgaaggcgtctctgactctgcctgagcagattgac
cagcaggtggcgctgtgcagagaacacaacactccaactgtctgcttcaatgtcaccgtc
tgcttcagtgtctggtcccgacatttcagaggagccatagatcttcagtataatttgacc
tctgacctcctccataaaccatccttccctcatcgtttcgatttccatggtaacgggtcg
tccaacagcactaggggtcatgtgaaagcccgacacggccagcttacgtgtacaacacac
gtggcattccaaaggaaagacgtgagggacattttcactccggtccagttcgaagtttct
tatggtctcagagaaacaagcacccacaaagcctcctccagaaccttccctccgttaaaa
cccatcctgcagcagggcacaggacaccagaacaccatcaccaaccagactcagtttgct
cgttcctgttctctggtgaactgttcgaccaacatgcagctgtcggccgtactagtgctg
ccccatcagcagcagtacttcgctctcggctctggacagaccatcatgttgaaaacctcg
atggtgaactctggagacgacgccttcctgccacgactgatgctgtatttcccaaacaac
atccactacattaaagttctgcagaaccaggacaacctggtcagctgtgatgtcacacag
gaaatcaacagtacaatggtgctggtcgactgcagcgtcaccagcctcctgctcccagca
caaagccagctaaatatcaacttcctgttggacgtgaaccagaacagcacgtccggtgat
atcgacatccatgtcaacaccagcagtgataactatgagagggcggagtatctccatgac
aactccctcagcctcctccttcctcttaaatatggagtcaacatcaacatccacggcttt
gtgactcccacatcttttgtgtttggagatgaagacttgactccagtcgactgctacgct
gaaacattcaactacacatacaaggttttaaactctggacccagcaggtcaatagatacc
gtggttgagattgcgttaccgaagattctcacaccgtaccgacacagactgctgcaggtg
atcgactggcagtcgtctcatggcgtgtgttccatcagtgacacgactgtttcagtcatc
gaggactgtgacgttcctcaagcttctttcatcaaacaactcatcttcttcttctcctcc
atctccacccgcagactgttttgtggccgtggtgatgagctgtgtgagcgactggtgtgt
cgtcttggtaacctggaggcaggaagagatgccacaatccaactggagacaagactgaac
cctgctgtgctgctgcaagctccgggtcgtcatggtatcatgaggttggaaagcacagcg
atgatgtcatctcccagagaagatcctcacaccatcctcatccagaaacctgcagtacag
gtggtggttgaagctctttttacccagaaacccacgacgacagtgaaggtcttcatcatc
gtggtcagtttagttttgggtctgatgatactggctgctctcatctggtgtctgtggaag
gctggtttctttaagaggaacctgcacaagaaggaggaggagttcaggagacacagctgg
gactacgttcccaagagcaacgagagagagagcttttcataa
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integrated database retrieval system
