Hippoglossus hippoglossus (Atlantic halibut): 117754767
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Entry
117754767 CDS
T07778
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhip03016
]
117754767 (lcmt2)
Enzymes [BR:
hhip01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
117754767 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
117754767 (lcmt2)
Transfer RNA biogenesis [BR:
hhip03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117754767 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Kelch_5
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_6
Kelch_2
Kelch_1
RAG2
Motif
Other DBs
NCBI-GeneID:
117754767
NCBI-ProteinID:
XP_034429864
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All DBs
Position
21:1787177..1792936
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AA seq
673 aa
AA seq
DB search
MPTSSRQKKKGGDVAVQGTNDSSVVSKASAAARGYFHDHFLQHFVCKEARRAPLINRGYY
LRWRAVDHCVRRFLHVTENCPKRQILSLGAGFDSLYFRLRADEALAGVVVFEVDFPDVAG
RKTALISSNITLRGMLDPHLPAPTGAVHVCSGQYRLLGLDVREESQVKEALEAAGLDWAA
PTLILSEVVLTYMETQWSDVVISWAAKLLPQSLFVMYEQIHPHDPFGSIMQDHFHKLNST
LHALRQYPDTAAQRRRFLDKGWDQCVCLDMNDFYLGLVPEDERRRVEDLEPFDEYEEWHQ
KCSHYFILTASQGSCMTQALLTHPPVSPVSSVNPSLSPVALSVKLDPACVEGLGMASTSV
SPGQLLLTGGSGRGGRGAASRVLLRGQEGWRSVTVEPSLDLGVRLYHTATSCPGGGAVVY
GGRSSPLSPARGLFKVLLDPAGPPAPLDGVKLCVEEMLCTGDPPPPRWRHTAAIVSHKGK
DFLFVYGGKNESDAVLGDAHFLCLDQLLWTEIPVEGAAPEPLHSHSACSYQGGVVMFGGL
DRRGVPLGDTVVLRPTDRGFSWERIELQPPPVPRYSHSAHVIGQKLVVVGGVWMHSDGVP
GVVMIDLATRSSVEFSLDTTRVPWPLMLHSFCCELTDSEEPELLLIGGGGSCFSFGTHFN
PQPVTLNLRPVLG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgagcagcagacagaagaagaaggggggggacgtggcggtgcagggaaccaac
gacagcagcgtggtgagcaaggcatcggctgcagcgcggggctacttccacgaccacttc
ctccagcactttgtgtgcaaagaggccagaagagccccgctcatcaacaggggctactat
ttgcgctggagagctgtggaccactgcgtgaggaggtttctacacgttactgaaaactgc
cccaagagacagattttgtcgttgggcgcaggtttcgactcgttgtattttcgcctgcgg
gcggatgaagctctcgccggagtcgtggtgtttgaggtggatttccctgatgtcgctgga
cgtaaaactgctctcatctcctctaatattacactgagggggatgttagacccacattta
cctgcacctacaggagctgtgcacgtatgcagtggtcagtatcgtctgttagggttggat
gtcagagaggagtcccaggtgaaggaggctctggaggcagccgggttggactgggctgct
cccactctgattctgtctgaagtggttctcacctacatggaaacacaatggtcggatgtc
gtcatcagttgggcggcaaagctcctgcctcagtccctctttgtgatgtatgagcagatc
catccacatgatccctttggttcaatcatgcaagatcatttccacaaactgaattcaacg
ctgcacgcccttcgacaatacccagacaccgccgctcagagacgccggttcctggacaag
ggctgggatcagtgtgtgtgtctggatatgaatgacttctacctggggctggttcctgag
gacgagaggcgcagggtggaggacctggagccttttgatgaatatgaggagtggcaccag
aaatgttcccactacttcatcctcactgcctctcagggctcttgtatgactcaggcttta
ctcacacatcctccagtgtctccagtgtcgtctgtaaacccatctttgagccctgtagcc
ctgagtgtgaagcttgatcctgcttgtgtggagggtttggggatggcctccacctcagtg
agcccaggacagctcctgctaacaggaggctccggcagggggggcaggggggcagcgagt
cgagtcctcctccgaggacaggaagggtggagatccgtcactgtggagccgtcactagac
ttgggcgtgcgactgtaccacacggccacgtcctgtccaggaggaggtgcggtggtgtac
ggaggtcgctcctctcctctcagcccagccagaggccttttcaaagtgctgctggaccct
gctggtccccctgcccctctagacggagtgaaactgtgtgtggaggagatgctctgtaca
ggggatccacctccgccaagatggaggcacactgctgccatcgtcagtcacaaaggcaaa
gactttctgtttgtttacggtggaaagaatgaatctgatgctgttctgggtgacgcccac
ttcctgtgtctggaccagctgctctggactgagatcccagtggagggagccgcaccagag
ccactccactcccactccgcatgttcatatcagggaggtgtggtgatgttcggaggtctg
gaccgaaggggggttcctctgggggacacggtcgtcctcaggcccactgacagaggattc
tcctgggagagaatagagctgcagccccctccggtccccagatactctcattctgcccac
gtgattggacagaagctagtggtggtgggcggggtctggatgcattccgatggcgtaccg
ggtgttgtcatgatcgacctcgccacacggagcagcgtggagttcagcctggacacgacc
cgggtgccgtggcctctgatgcttcactctttctgctgcgagctgacagactctgaagaa
ccagagctgctcctgattggtggaggaggaagctgcttctcctttgggactcatttcaac
ccccagccggtcactctgaacctcaggcctgtcctgggatga
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