Hippoglossus hippoglossus (Atlantic halibut): 117754863
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Entry
117754863 CDS
T07778
Symbol
ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04622
RIG-I-like receptor signaling pathway
hhip05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117754863 (ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117754863 (ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hhip04054
]
117754863 (ifih1)
Enzymes [BR:
hhip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117754863 (ifih1)
Pattern recognition receptors [BR:
hhip04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
117754863 (ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
DEAD
ResIII
Helicase_C
CARD
SWI2_SNF2
AAA_22
C1_4
Motif
Other DBs
NCBI-GeneID:
117754863
NCBI-ProteinID:
XP_034430093
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All DBs
Position
21:complement(12159057..12170700)
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AA seq
949 aa
AA seq
DB search
MSAAGAETMASPADEAWESFIGDIRPRLKELVVVEPLLDHVHFIGPEQKELILQRARREG
DRAAADLLIDAVIRRPHPAGWFRAFVDALVKSGCDYAADIIQAGLPEPEVEAENDEYVRL
IQILSPSLVQMKTDEVCVHCLAEGLVTEEDSEKIKAETTSRGPRSGARELLRRIVRGRPG
WFSKFLHILRETEHQSLYELTGGSPDCDKEGLFAGASAECEQLPKSQKPSQSDGTVPEAA
ARGPERTDIRLRDYQMDVARPALEGKNIIICLPTGSGKTRVAVYITKEHLDGRRAEGQSG
KVVVLVNKIPLVEQHYSAEFLPFLKPTYKVERVSGDCQLKISFTEILKKNDVVICTAQIL
ENHLERSITGEDEGVKLSDLTLIIIDECHHTQKGEVYNHIMMRYLKQKHKNEKMKKEQRE
TVPLPQILGLTASPGVGGANNMKKAVEHILRICANLDAYKIMTSSLGDCKKNPNKQTLSV
EDRIEDPFGDVIKKIMNAIHTHANLSTNCDLGSQRYEQWVVTTEREAAAKEDHKVRVCAE
YLRQYSEALNLSNIIRMCDAFRILNEYYEKEIHTKMNPDEMQIIQITDTERFLFNLFKEN
KEELQTLAGNPQYENDSLSKLRGKILHEFSSREAARGIIFTKTRISAIALSHWIQENPKF
ADIGVKASYVIGGGDQSVVKPMTSAEQRDVLKNFHNGDVNLLIATTVAEEGLDIAACNFV
IRYGLVTNEISMIQAEGRGRAEDSTYTLVDVKNSGVAEKEWVNEYRKKMMNKAIENIGSL
NQADYKKQIIDFQFQAITEKRVRLAKKKQKKMTSESPSDVKFTCRGCSKHVCNGDDIQVI
ESMHRVNVTEQFSELYIERENPSPQERPLDLETKGSIACKKCGRGWGVMMVYHGIECPCL
NVQNFVVTLNEKTIPNCTKWSKLAVRFSAFDYAEQARQMASSSDEMDTT
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgcaggcgcagagaccatggcctctcccgcagatgaagcctgggagagtttc
attggagacatcaggccgaggctgaaggagctggtggtggtggagccgctcctggatcat
gtgcacttcatcggcccagagcagaaggagctcatcctacagagggccaggagagagggg
gaccgagcggccgccgatctgctcatcgacgcggtcatcaggaggccacatcccgccggc
tggttccgagcgtttgtggacgcgctggtgaaatcaggctgcgactatgctgccgacatc
atacaggccggactccccgaacctgaggtggaggcagagaatgatgagtatgtccggctc
atccaaatactgtcccccagtcttgtgcagatgaagactgatgaggtgtgtgtgcactgt
ttggctgaaggcctggtcaccgaagaggactccgaaaagattaaagctgaaacaacaagc
agaggacccaggagcggagcccgtgaacttctgagacgcatcgtgagaggtcgaccgggg
tggttctcaaaatttctccacatcttgcgtgaaactgagcatcagtccctgtatgagctg
acaggagggtcacctgactgcgacaaagaaggactttttgcaggagcgagcgctgaatgc
gaacaactgccaaaaagccagaagccttcacaatcagatgggactgtcccagaagcagcg
gccaggggcccagagaggactgatattcgtctgcgagattatcagatggatgttgcaaga
cctgccctggaggggaaaaacatcattatatgcctcccgacaggaagcggtaaaacccga
gttgcagtttatattaccaaagaacatctggacggcaggagggccgaggggcagtcgggg
aaagtggtcgtgctagtgaacaagattcctctcgttgagcagcattattccgcagagttc
ctgccttttctgaagcccacatataaagtggagagagtcagcggagactgccagctcaaa
atctctttcacagagatcctgaagaaaaatgacgtcgtcatttgcacggcccagatcctg
gaaaaccacttggagaggtctatcacgggagaggacgagggcgtgaagttaagcgatctg
acactgatcatcatagatgagtgtcaccacacccagaaaggagaagtctacaaccacata
atgatgcgctacctgaagcagaagcacaagaacgaaaagatgaagaaggagcagagggag
accgtgccccttcctcagatacttggcctgactgcttcacctggggtcgggggagccaat
aatatgaagaaagcagtggagcacattctgcgaatctgtgcaaacttggacgcttacaaa
atcatgacgagcagccttggggactgcaaaaagaatcccaataaacagactctaagtgtt
gaagacagaattgaggatcccttcggtgatgtcattaagaaaatcatgaatgccattcat
actcatgcaaacctgagcaccaactgtgaccttggttcccagcgttatgaacaatgggtt
gttacaacggagcgagaagctgcagcaaaggaagatcacaaagtacgggtttgtgcagaa
tacctgcgacagtacagcgaggccctgaatctcagcaacatcatccgcatgtgcgacgcc
ttccgtatcctgaatgaatactacgagaaggagatacacacaaaaatgaacccagatgag
atgcagatcatacagatcacagacactgagagattcctcttcaatttgtttaaagagaac
aaggaagagctgcagactcttgcggggaatccacagtatgaaaatgacagcctgtcaaag
ctaagaggtaaaatcctgcatgagttcagcagcagggaagcggccagggggatcattttc
accaaaacacgcatcagtgccatcgctctaagccactggattcaggaaaacccaaagttt
gctgacataggagtgaaagcctcgtatgtcattggaggaggagaccagagtgttgtcaaa
ccaatgacctctgcagaacaaagggacgtgttgaaaaacttccacaatggagatgtcaac
ttgctgattgccaccacggtggcagaggaaggtttggacatagcggcatgcaattttgtc
atccgatacggccttgtgaccaatgagatttctatgattcaggctgaaggtagaggaaga
gctgaggacagcacttacactctggtcgatgtcaagaactctggggttgctgagaaggag
tgggtcaatgagtaccgcaagaagatgatgaacaaagccattgagaacatcggatcctta
aatcaagcggactacaaaaaacagatcatagattttcagtttcaagctataaccgagaag
agggtgagattggcaaagaagaagcagaaaaaaatgacgagtgagagtccatcggacgtg
aaatttacctgccggggctgcagcaaacatgtctgcaatggtgacgacatccaggtcatc
gaaagcatgcacagagtcaatgttactgaacagtttagtgaactttacattgagagagaa
aacccctctccccaagagcgacctctggatttggagaccaaaggctccatagcatgcaag
aagtgtgggaggggatggggtgtgatgatggtgtaccatggcatcgagtgcccctgcctc
aacgtgcagaacttcgtggtgacgctcaacgaaaagacgattcccaactgcaccaagtgg
agcaagctggccgtcaggttttctgccttcgactacgctgaacaagcgagacagatggcc
agcagctctgacgagatggacactacttga
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