Hippoglossus hippoglossus (Atlantic halibut): 117754868
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Entry
117754868 CDS
T07778
Name
(RefSeq) nuclear factor 7, brain-like
KO
K12012
tripartite motif-containing protein 35
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117754868
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117754868
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-B_box
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
zf-rbx1
Prok-RING_4
zf-Nse
zf-RING_6
zf-ANAPC11
Sina_RING
DUF4200
PEHE
Motif
Other DBs
NCBI-GeneID:
117754868
NCBI-ProteinID:
XP_034430099
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Position
21:15929454..15931252
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AA seq
462 aa
AA seq
DB search
MASRSEEDLCCPVCQDVFRDPVILSCSHSFCKDCVKRWWKDKEVKVCPLCKRRSSKWEPP
CNLALKNLCETFLQERDQSSSHALCSQHSKKLRLFCLDHHQPVCVVCRDSEKHTDHRIRP
INEVAQQHKEQLQETLEPLKRKLECFEHVKVEFEQTAEHIKDQAGLTETQIKEQFKKLHQ
FLEEEEEARMAALREEEEQKSRMMKKKIESLSRDIMALSETIRTTEDELRAEDVSFLLNY
KAAVERVQQRPLLDDPQLASGALIDKAKHLGNLSFNIWNKMKDMVSYSPVVLDPNSAHPK
LVLSEDLTSLRQGERQTLPDNPERFDYYLSVLGSEGFNSGTHSWDVLVGDSTIWALGVSA
ESVQRKGDNLSESWRIRFHEGKYTLMSPSASSVLSVQKIQRIRVKLDWNRGELSFSDPDT
NTHIHTFTHTFTQKMFPFFSIRDHLKLLPVNVSVTLDQSSKR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagatcagaagaggatctctgctgtcccgtctgccaagatgtcttcagagat
cctgtcattctgtcatgtagccacagcttctgtaaagactgtgtgaagagatggtggaaa
gacaaagaagtaaaagtgtgtccactttgtaagagaagatcttcaaagtgggaaccacct
tgtaacctggcgttaaagaacctgtgtgagaccttcttacaggagagagatcagagctct
tcacatgctctctgcagtcagcactcaaagaaactcagactcttctgtctggaccatcat
cagccagtgtgtgtcgtctgcagagattcagaaaaacacaccgaccacagaatcagaccc
atcaatgaagttgcacaacaacacaaggagcagcttcaggaaactctggagcccttgaag
aggaagttagagtgttttgaacatgttaaagtagagtttgaacaaacagcagaacacatt
aaggaccaggccggactcacagagacgcagatcaaggagcagtttaaaaagcttcatcag
tttctggaggaggaagaggaggccaggatggctgcactgagggaggaagaggagcagaag
agtcggatgatgaagaagaagattgagtctctgagcagagacataatggctctttcagaa
acaatcagaaccacagaggacgagctgcgagctgaagacgtctcgttcctgctcaactac
aaggctgcagtggaacgagtccagcagcgccccctgctggatgatccacagctggcctca
ggagctctgatagacaaggccaaacatctgggcaacctgagcttcaacatctggaacaag
atgaaggacatggtctcctacagtcctgtggttctggacccaaactctgctcatccaaaa
ctcgtcctgtctgaagatctgaccagtttgagacaaggagagagacagacgcttcctgac
aatccagagaggtttgattattacctctcagtcctaggatctgagggttttaactcaggg
actcacagctgggacgtcctggttggagacagtacaatctgggcactgggtgtgtcagca
gagtctgtccagaggaagggagacaatctgtctgaatcatggagaataaggttccatgaa
ggtaaatacacattaatgtcaccatcagcatcatctgttctctctgtgcagaagatccag
aggatcagagtgaaactggactggaacagaggagaactgtcgttctctgatcctgatact
aacacacacattcacaccttcacacacactttcactcagaagatgtttccattctttagc
attagagatcacttgaagctgttacctgtgaatgtctctgtgacgctggatcagagcagt
aagagataa
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