Hippoglossus hippoglossus (Atlantic halibut): 117755001
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Entry
117755001 CDS
T07778
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117755001 (tp53bp1)
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
RTT107_BRCT_5
Tudor_5
DUF4537
Tudor_2
Motif
Other DBs
NCBI-GeneID:
117755001
NCBI-ProteinID:
XP_034430325
LinkDB
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Position
3:complement(258036..285171)
Genome browser
AA seq
1629 aa
AA seq
DB search
MDPGDLDSSLPQPDNPCLIVEDSQPDSVALEDDPESSYRALLARRLSTLQPSSRSPVLEL
ISSPLGSRSSQTDSESSQSNNQAEPGILTTVNPSSALQEESQVLHTCPPPNKKSSPEETE
MDSGADSTTHCQSEEGTSQIGFLELSQTQDLCSEAVNSRGGDCERPNKLAEQSSKTSATR
DNKSVRSEVSSSSSSDSAAPSGRQLSVQALLHSESPQASGEQRQLDCEVPSSQEDMFDAD
KTGAAVDSTVSEQEQQGHPTPTPSHTLGLLHLSGQGTLVQESLSQSSADFVAPTPDNFSH
TPIMVPSSPTGPEHEHGADEPMDTSLPPEDRAGEREEQPMETEAASKLHPSSSTPVSQNA
PGFALDRTLSLPSQPQFSHDVFVATQSLEPPRPSDKKSTPHETESQHLESAPFTSPLQLC
VNTQSSGPAQQTSAQIEDDSQATQIEEFEVPPAVDTSDSVTLCRDQRSDSNSVPPVSQTS
SKASTSAESPKCFNECAKTEPSNQSQGSDVHNQTASLNVQNVNVKDGKGTTSADMASCSQ
PKLDSSDVSVSICVQETPSDTPPPCSLPAQSVFSVDVRGGTTKRRSVESVSQTNSDTMDQ
VEEVVMEEEESATGGGASGMALALSQSQLMTPEPMEDESEEQGGDSVIVVTDSERHSQIL
KNDATNSSQPIRVNVSASTNGHESQSEMKKVNAALDRLPQTKRAGPQPEVLKDKSLSDSS
GEISFHFTLPKEGELIGPAAGATPPLINQLKQSLRHSTPIEIFSEKSDNVGDVSADVAMA
ASDIVSGEGGEDRTDPGDRKLSLRMKLVTPVEEGSSESFSLQKPALSDEDASVVKAATVS
KAVTSSSSVFSRVRQVHRQQEDNSPVRAELFASPQRSSQASSLGCNSLPNSQSQAPQQET
APQRNPVNTPTPADQSEERRGPPDSSDPPTPNSRDARLKASSQRTFDHTVSSSPFNKRTL
SQQTSFQAEGLRSPAGRGEPEFPSFRRTTGPAHCRHVRTTQEVRTTVTRVITDVYYEDGK
EVDRKVTEESEEPVVDCHVLDSDISPCRTGSSSLTSGDLGDISSLSSKASSLQHSSGGTS
SSTGFARPDFIMPSSRGGRSFRGGGVGSLQRLGAHGRPPSSSEDEPFTRMLPPRLPVSPT
DTELPSHSDSLRSSPEEASSASSSFVGLRVVAKWSSNGYFYSGRIIRDAGEGSFRLRFDD
GYECEVVGKDILLCDPIPLETEVTALLEDEYFSIGVVRGHKSEGQELLYSVERDGQRQWY
NRTSVILSLEQGNRLREQHSLGPYEPSAPVAKASDISLDNLVEGKRRRRVTPGGQDTPNR
SSSSSPRTPGPSGKRKLRTTSEDDRSPAKRGRRGPGIRAAQRVGVCNTSGSGTDLPGQSG
DVSETQGPLPQNTSLFMGFAFMLTASSESDRLTNKLTEEEEEEEEDPIETSPFNKAYTES
QLQAGGGFILPDFNEEQCKAAYQSLLIADQHCRTRKYLLCLASGVPCVSHVWVRDCCKEN
KLLNYRNYLLPAGVGPDNAVVEWHPRCSPFKSLRVLLVFEQPAELWAQLVTMGGASSVRQ
LQADKDCSDVPAGKYDAVVTDHACPPLVEKSVTSQEVPLVSPEWLIQSLICGERLGFRSK
PQYRHDYSS
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggggacctggactccagcctcccgcagcccgacaacccgtgtctgatcgtg
gaggactctcagccggacagcgtcgccctggaggacgatcctgagagcagctaccgagct
ctgctggcccggcgcctgtccaccctgcagcccagctcccggagcccggtgctggaactg
atctcctcacctctgggaagcagaagctctcagacggactccgagagctcccagagtaac
aaccaggctgaacctggtattctcacaacagtcaacccgagctcagcgctccaggaggag
agtcaagttctccacacctgccctcctccaaacaagaagagttcaccagaggaaacagaa
atggattctggggctgattctaccacacactgtcaatctgaggagggaacctctcagatt
ggttttcttgagctttctcagactcaagatctgtgcagtgaagcagtgaacagtcggggg
ggagactgtgagagacccaacaaattagcagagcagagctccaagacctcagcgactcgg
gacaacaaatctgtgagatctgaggtgagctccagcagctcgtcagactctgcagctcct
tcgggccgacagctcagtgtccaggctctgctgcactctgagagtccccaggcctcaggt
gaacagaggcagctggactgtgaggtcccgtcctcgcaggaagacatgttcgatgctgac
aagacgggtgccgcagtggacagcacagtatctgagcaggagcagcagggtcacccgacc
ccgaccccgtcccacaccctgggactgctgcatctgtctggacagggaacactggtgcag
gagagtctgtcccagagctctgctgatttcgttgctccgactccagacaacttcagccac
actcctataatggttcccagctccccgaccggaccagagcatgaacacggtgctgatgaa
ccaatggatacttcgttgcccccagaagatcgagcaggggagagggaagaacagccaatg
gaaacggaggccgcctctaagctccacccatcctcctccacgccggtatcccagaatgcc
cctggttttgcattggatcgtactctctctttaccctcccaaccacagttctctcatgac
gtgtttgttgcgacacagagtctggagcctcctcgaccgtctgataagaagtcgacgcct
catgagacggagtctcaacatctggagtcggcaccgttcacttcgcctctgcagctgtgt
gtgaacactcagagcagcggtcctgctcagcagacctcagcgcagatcgaagacgacagt
caggccacacagattgaggaatttgaagtgccgcccgctgtcgacaccagtgactctgtg
actttgtgccgtgaccagaggagcgatagcaacagcgtccccccagtatcacaaactagt
tcaaaagcttccacctctgccgaatcaccaaagtgtttcaacgaatgtgccaagactgag
ccgtccaatcagtcgcaaggttctgatgtgcacaaccagaccgcttctttgaatgtacaa
aatgtgaacgtaaaagacggcaaagggacgacctctgcagacatggcgtcctgctctcaa
ccaaagcttgactcctcggatgtgtctgttagcatctgtgtgcaggagactccgtcagat
acgccgccgccctgtagtttgcccgcgcagtccgtcttctctgtggatgtaagaggagga
acgacaaagcgtcgctctgtagaatcagtgtcccagactaacagcgacacgatggatcag
gtggaggaggtggtgatggaggaggaggagagtgcaacgggaggcggggcttcaggaatg
gctcttgctctctctcagagtcaactgatgactcctgagccgatggaggacgagagtgaa
gagcagggaggtgacagcgtcatcgtggttacagacagcgagagacactcccagattctg
aagaacgatgccaccaacagctctcagccaatcagagtcaatgtgtccgcctccaccaac
ggccatgagtcccagtctgagatgaagaaggtgaacgcggcactcgataggttgcctcag
acgaagagggcggggcctcaaccagaggtgctcaaagacaagagcctcagtgacagttcg
ggagagatttccttccacttcacacttcctaaagaaggggagctgattggtcctgcagct
ggagccacgcctcctctaatcaatcagctgaagcagtcgctgagacacagcactcccatt
gagatcttttctgagaagtcggacaatgtgggcgatgtctctgcagacgtggcgatggct
gccagcgacattgtgtctggggaaggtggcgaggacaggacggaccctggagacaggaag
ctgagtttgaggatgaagctggtgaccccagttgaagaaggcagctctgagtccttcagt
ctgcagaagccagcgctgtcagacgaggacgcatctgtcgtcaaggccgccaccgtttcc
aaggctgtaaccagcagctcgtcagtgttcagtcgagtccggcaggttcacagacagcag
gaggacaactcacctgtcagggcggagctgttcgcctcgccacagagaagctcccaggct
tcctcgctgggatgcaacagcctgcccaacagccaatcacaagctccacaacaggaaacg
gcaccgcagcggaaccctgtaaatacccccacccctgccgaccaatcagaggagaggaga
ggaccacccgactcttcagacccccccaccccaaacagtcgagatgccagactgaaggcg
agttcccagaggacctttgaccacaccgtcagctccagtccattcaacaagcggacgctc
tcccagcagaccagcttccaggcagaggggctgcgctcgccagccggcaggggggaacca
gagtttccgtcctttagaagaaccacaggccccgcccactgcagacacgtccgcaccacc
caggaagtgcgaaccaccgtcactcgggtcattacagatgtttattatgaggacggcaaa
gaggtggatcgcaaagtcactgaggagagcgaggagccggtggtcgactgccacgtgttg
gacagcgacatctctccgtgccgcacaggaagcagctccttgacctccggtgacctgggg
gacatcagctcgctgtcgtccaaggcctccagcctgcagcacagctcaggaggaaccagt
agcagcaccggcttcgccaggccggacttcatcatgccgtccagccgagggggcagatcc
ttcaggggaggaggtgtcggctccctgcagagactcggcgctcatggccgcccaccgtcc
tcctcagaggacgagcccttcacccgcatgctccccccacgtctccccgtcagccccacg
gacaccgagctccccagccactccgactccctcaggtcgtctccagaggaggcgagctcg
gccagcagcagcttcgtcggcctgagggtggtggcaaagtggtcgtccaacggctacttc
tactcaggccgcatcatcagagacgccggggaggggagtttccgcctgcgatttgacgac
ggctacgagtgcgaggtggtggggaaggatatcctgctgtgtgatcccatccccctggag
acagaggtcaccgctctgctcgaggacgagtacttcagcataggtgttgttcggggccat
aaatccgagggccaggagctgttgtacagtgtggagcgggacggacagaggcagtggtac
aacaggacgtcggtcatcctgtcgctggagcagggaaacaggctgagggagcagcacagc
ctcggaccctacgagccgtccgctcctgtggccaaggcctcggacatcagcctggataac
ctagtggaggggaagaggaggcgcagagtgacccctggaggtcaggacactcccaaccgc
agctcctccagcagcccccgcacccccggcccctccggcaagaggaagctgaggacgacc
tctgaggacgacaggtcgccggccaagagaggccgcaggggtccgggcatcagagccgct
cagcgggtcggagtgtgtaacacctcgggcagcggcacagacctccccggtcagtcgggc
gacgtgtcggagacccaggggccgctgcctcagaacacgtctctcttcatgggcttcgcc
ttcatgctgacggcgtcgtcagagagcgaccggctgaccaacaagctcacggaggaggag
gaggaggaggaggaagatcccattgagaccagtccgttcaacaaagcgtacaccgagtcc
cagctgcaggcgggcggaggcttcatcctgcccgacttcaacgaggagcagtgtaaggca
gcctatcagagcctgctcatcgccgaccagcactgccgcaccaggaagtacctgctgtgt
ttggcgagcggcgtgccgtgcgtgtcacacgtgtgggttcgagactgctgcaaagagaac
aagctgctgaactacaggaactacctgctgccggccggggtggggccggacaacgccgtg
gtagaatggcatcctcgctgcagccccttcaagtccctgcgggtccttctggtgtttgag
cagccggcggagctctgggctcagctggtcacaatgggcggggcctcgtcagtccgacag
ctccaggcggacaaagactgttcagacgttcctgctggaaagtacgacgctgtggtgaca
gatcacgcctgtccaccattggtggagaaaagtgtgacctcacaggaagtcccgctggtg
tcccctgaatggctcattcagagtctgatctgcggcgagcgcctgggtttccgcagcaag
cctcagtatcgccacgactactcgtcataa
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