Hippoglossus hippoglossus (Atlantic halibut): 117755002
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Entry
117755002 CDS
T07778
Name
(RefSeq) TBC1 domain family member 8 isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117755002
Membrane trafficking [BR:
hhip04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117755002
Endosome - Golgi transport
Rab GTPases and associated proteins
117755002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
117755002
NCBI-ProteinID:
XP_034430326
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All DBs
Position
21:complement(20543430..20566735)
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AA seq
1136 aa
AA seq
DB search
MWLNPEEVLLKNALKLWVTERSNAFFLLQRRRGHGESTGRITGLLVGALDTVLDSNARVT
PFRILLQVPGSQVSWVIASGAAIEELNKHWDWLLRNLLHSLSVFENKEDVASFVKGKVKG
LIAEEVRGRQAAQEEEPEKFREALLKFELHFGLPSSEKLVTYYSCCCWKGRVPRQGLLYL
SINHMAFYSFLLGKEVKFVIPWAEVTRLERVSTGLMTEAILVHTRQRQREFSMFLNLDEV
FGVVGQLADIALRRLLDSEGLELDRVLQQPARITKRVLEEQALREYVLALFRLPRGERLH
EVASCSVWTPHARCHTSGTLYTADNYLCFSSREEGNCILLIPLAEVLSIEKAESTNLLPN
PVIVSLRTKKAFQLIELQDRDELVESLNSRLRALQWKQSMFRSKKDSRRSLRSPTPYYTF
YYDTGHSDEEEIEEQVLRNTVNSEALMTAFHQNQPGTNGNKSMEQVKERLWDEHFSEFGR
GVHMFRTEKIQRLVAMGIPESLRGELWMTLSDASSELESHQGYYTSLVKKSMGQSSLATE
EIERDLHRSLPDHPAFQNPTGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYAKEEE
AFWLLVAVCERMLPDYFNRRVIGAQVDQSVFEELIRERLPELAEHVPDLSALSSVSLSWF
LTLFLSVLPFHSAVCVVDCFFFHGIKANFQLGLAVLEANAAQLSACTDDGQALMILTGFL
EQVGSEASSSPPSSPPSSPLSSPPAADERGRSDSDVPVVHANITNLINESYEKFGDLTVR
QIERLRCRHRIRVLQAHEDTTKENALRLVTPDVSIPSENLADVYDLFKTEHFISLYWGDS
SSAAAAEAAAWSYMDSGRSYLERQYRLDRPQFKSLYGLLVPWPGDSNQHMDTVANRTFTL
LDQDQDNLVTFREFAGWLDTLYCEELNEKVRLLYRLHIPPALTESEDDPSLMKSPLLSTN
RPLCVNKPSGGEEEVKEDYQEQLKRMLRDLAKEKEKDVKKPLPLMNQREFIQFCKTLYSM
FHGEAEENDLFQAIATVTSLVLQIGEASHRGLSSSESEVTSQEEVKGAQPTQTAEDAGAD
NEWTISFAQILASLLTEQALVNFFEKPADLTEKISEAKEKQYQQRAGLLTLQRRSS
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaacccggaggaagttctgctgaaaaacgctctgaagctgtgggtgacggag
aggagcaatgccttcttcctcctgcagaggaggagaggccacggggagtcgactggcagg
atcacaggtctcctggtgggagcactggacacggtgttggactccaacgccagggtcacg
cccttccgcatcctcctccaggtcccaggctcccaggtcagctgggtcatcgcgagcgga
gctgccatagaggagttgaacaagcactgggactggctgctccgcaacctgctccactct
ctgtctgtgtttgagaacaaggaggatgtcgccagcttcgtcaaaggaaaagtgaagggc
cttatagcggaggaggttcggggtcgccaggctgctcaggaggaggagccggagaagttc
agggaggctctgctaaagttcgagttgcactttggcctcccgtcgtcggagaagctggtg
acgtactactcctgctgctgctggaagggccgggtgcctcggcagggcctcctctacctc
agtatcaaccacatggccttctactccttcctgctggggaaggaagtaaaatttgtcatt
ccctgggcagaggtgacgcggctggagcgggtctccaccggtctgatgacggaggccatc
ctggtccacacccggcagcggcagagggagttctccatgttcctgaacctggatgaggtg
ttcggggtcgtaggtcagctggctgacattgccctcaggcggctgctggacagcgagggt
ctggagctggaccgagttctgcagcagccggcgcgcatcaccaagagggtcctggaggaa
caggcgttgagagagtacgtcctggctctgtttcggctcccccgcggtgagaggctccac
gaggtggcgtcctgctcggtctggacgccacacgcccgctgccacacaagtgggaccctc
tacactgccgacaattatctgtgtttctccagccgagaggaaggcaactgcatcctgctc
atacccctcgctgaggtgttgtcgatagaaaaagcagagagcaccaacttgcttcccaac
cccgtcatcgtgagcctccggacgaagaaggcgttccagctgatcgagctgcaggaccga
gacgagctggtggagagtctgaactccagactccgagctctgcagtggaaacagtccatg
ttccgcagcaagaaagacagcaggaggagtttgcgctcgccgaccccgtactacaccttc
tactacgacactgggcattcagatgaggaggagatcgaggagcaggttctgcgtaacacg
gtcaacagtgaggctctgatgacggccttccaccaaaaccaaccagggaccaacggcaac
aagagcatggagcaggtgaaggagcggctgtgggacgaacacttctccgagtttggacgc
ggcgtccacatgttccgcacggagaagatccaaagacttgttgccatggggataccggag
tccctgcgaggggagctgtggatgacgctttctgatgcatcctcggagctggagtctcat
cagggctactacaccagcctggtgaagaagtccatgggccagagcagcctcgccaccgag
gagatcgagcgggacctccaccgctcgctgccggaccaccctgccttccagaaccccacc
ggcatcgctgcactccgacgtgtcctcaccgcctacgctcatcgcaacccgaagatcgga
tactgtcagtctatgaacatcctggcgtcggtgctgctgctttacgccaaagaggaagaa
gcgttctggctgctggtggctgtttgtgagaggatgctgcccgactacttcaaccgcaga
gtcataggagctcaggtggaccagtctgtgttcgaggagctgatcagggagcgtttgccg
gagctggccgagcacgttccagacctctccgccctctcctccgtctccctctcctggttc
ctcaccctcttcctcagcgtcctgcccttccacagcgccgtctgcgtggtcgactgcttc
ttcttccacggaatcaaagccaacttccagctgggtttggccgtgctggaggccaacgcc
gctcagctctccgcctgcaccgatgacggacaagcactcatgattctcacaggttttctg
gagcaggttggaagtgaagcgtcgtcttcccctccgtcgtcccctccgtcgtcccctctg
tcgtccccgcctgctgcagacgagagaggccgcagcgactctgatgttcccgttgttcac
gcaaacatcaccaacctcatcaatgagtcgtacgagaaattcggagacctgacagtgcgg
cagattgagaggcttcgctgtcgacacaggatccgggtgctgcaggctcatgaagacacc
accaaagaaaacgctttaagattggtgactccagatgtttccatcccttcagagaacttg
gccgacgtctacgacctcttcaagaccgagcactttatcagcctgtactggggcgacagc
agctctgcggcggcggcggaggcggcagcgtggagctacatggactccggtcgctcctac
ctggagcggcagtaccggctggaccggccccagttcaagagcctgtacgggctgctggtg
ccgtggcccggggactcgaaccagcacatggacacggtggccaaccgcaccttcacgctg
ctggaccaggaccaagacaacctggtgacgtttcgagagtttgccggctggctggacact
ttgtactgtgaggagctgaatgagaaagtccggctcctctatcgcctccacatcccacca
gctctgacagaaagtgaggatgacccctctctgatgaagagtcccctgctctccaccaac
agacccctctgtgttaataagccctcaggaggggaagaagaagtgaaggaagattatcag
gagcagctgaagcggatgctgcgggatttggccaaagagaaggagaaggatgtgaagaaa
cctctgccgctcatgaaccagcgggagttcatccagttctgtaagaccctctacagcatg
ttccacggcgaagcggaggagaacgacctcttccaggccatcgccaccgtcaccagcctc
gtgctgcagatcggcgaggccagccaccgtgggctcagctcctcggagtcggaggtcaca
agccaggaggaggtgaaaggagcgcagcccacccagaccgctgaagacgcaggggctgat
aacgagtggacgatcagtttcgctcagatcctggcgtcgctgctgaccgagcaggcgctg
gtgaacttcttcgagaagccggctgacctcacagagaaaatctccgaggccaaggagaag
cagtatcagcagcgggccggtttgctcacgctgcagcgacggagcagctga
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