Hippoglossus hippoglossus (Atlantic halibut): 117755090
Help
Entry
117755090 CDS
T07778
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117755090 (sox21b)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117755090 (sox21b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117755090
NCBI-ProteinID:
XP_034430494
LinkDB
All DBs
Position
21:14242989..14246358
Genome browser
AA seq
246 aa
AA seq
DB search
MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFSFPMPYNLGEHDALKVSGLSMGALSDSV
MGHADKAAAAAAAAAARVFFNPSMSANPYSFFDLGSKMSELSQPSFQYASPLGYPPGAAA
AFAGSVGGGTHAHTHSHPSPGNPGYMIPCNCSAWPSAGLQPPLAYILLPGMGKPQLEPYP
AYAAAL
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccaatggatcacgtcaaacgcccgatgaacgctttcatggtctggtccaga
gcccagcgcaggaagatggcccaggagaaccccaaaatgcacaactccgagatcagcaaa
cgactgggagcggagtggaaacttctcaccgagtccgagaagaggccgttcatcgacgaa
gccaagcggctgcgagcgatgcacatgaaggagcatccagactacaaatacagaccgaga
cggaagcccaagactctgatgaagaaagataagttttccttccccatgccctacaacctc
ggggagcacgacgcgctcaaagtgagcgggctttccatgggagcgctttccgactccgtc
atggggcacgcggacaaggcggcggcggctgctgcggccgcggcggcgagggtcttcttc
aacccgtccatgtccgcgaacccttactcctttttcgacctgggatccaagatgtcagag
ctttcccagccttcctttcagtacgcgtccccgctgggctacccgccgggagccgccgcg
gcgttcgccgggagtgtaggtggcgggacgcacgcccacactcactcacacccgtcccct
ggaaacccgggctacatgatcccctgtaactgttcggcctggccctcagcgggactccag
ccgcccttagcgtacattctgctccccgggatggggaaacctcaacttgaaccgtacccg
gcgtacgctgcggcgttatga
DBGET
integrated database retrieval system
