Hippoglossus hippoglossus (Atlantic halibut): 117755114
Help
Entry
117755114 CDS
T07778
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117755114
Cell adhesion molecules [BR:
hhip04515
]
Cadherins
Protocadherins
117755114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF4788
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
117755114
NCBI-ProteinID:
XP_034430531
LinkDB
All DBs
Position
21:complement(14439658..14453454)
Genome browser
AA seq
1091 aa
AA seq
DB search
MRLSVPIFFLLWVKALTLKNLNYSVPEEQGPGTVIGNIAKDAGYGTMERGKKSNFRVLEN
SAPHLVDVDPESGLIFTKQRIDRETLCRRNPKCQLSMEVFANDKEICMIKIDIQDINDNS
PGFPSDHVNIDISENAAAGTRFPLTIAHDSDSGENGIKTYQVTRDDYNTFSLDLKVRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFEKSSYI
IEIPENSPPGKVLIDLNATDQDEGSNGQVVYSFTGYASERIQDLFSIDPNTGVIKVQGEI
DYEENPIIEFDVQAKDLGPNPIPGHCKITVKVLDKNDNSPIISFVSVRQGAISEAAPSES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDREMKDEYNVTIVA
RDNGIPSLNYTKSFTVKILDENDNPPRFTKTIYVLQVPENNIPGEYLGSVLAHDPDVGRN
GTVSYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKSFEFKVQAKDGGSPHMES
TSIVRVNILDVNDNLPVIILPLLQNDTAEIPVPRNVGIGYIVTTVKAVDHDHGESGHLTY
EITEGNDDHLFEMDPVGGEVRTAHALWEEVAPVVELVVKVTDHGKPPLSAVAKLIIKANT
ETAPGGGASTSGEQQHWDVSLPLIVTLCIISVMLLAVMTAIAVKSKHQDKETGNYNCRMA
EYSNPPVGKGKKKRINKSDIMLVQSEMEERDSASRMNVVSSPSLITSPICFDYQSPLPLT
LPRSEVMYLKTTPNSLTVPRAGCHSSFAGLSTDTPANRMSVIQTENFTSESNYAGSRQPF
VQSSTFKDAERASLRDSGHGDSDQADSDQDTNKGSHCDTSAREALKMKATAVNGQPFEQE
QDKSVHCTDECRALGHSDRCWMPKLRVGSQADSADNRTNLFIPVGMDAMVETEIYGTISC
SSRKTLSTFGKEQRDSTILVANVKPYLKSQRALSPPLQESPSVSSSPSKSSMPLDLANQG
SKEEREGGSNSSAYGPPDGQCSPLHTELEEPSYLTCELRPKSLSSSLIHSSVISQECGGS
DYALDPRDTGN
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctctgtacccattttctttctactgtgggttaaagccctgacattgaaaaat
ctcaattattccgtccccgaggagcagggacccggcactgttataggcaatatagcaaaa
gacgccgggtatgggactatggagcgggggaagaagtccaacttcagagttctggagaat
tctgcaccacacctggtggacgttgacccggagagtggacttatcttcaccaaacaaagg
attgacagggagacgttgtgcagacgaaaccccaagtgccagctctcaatggaggtgttt
gccaatgacaaggaaatatgcatgatcaagattgatatacaggacataaatgacaactcg
cccggttttccttcagatcacgttaacattgacatctcggaaaacgcagctgctggcaca
cgcttccccctgactattgcacatgactcggattctggggaaaatgggataaagacctac
caggtcaccagagatgattacaataccttctctttggatttaaaagtgaggggtgatggg
actatatatccagagctggtggttcagagacctctggatagggaggatcagagtcatcac
accctcctcctcacagcaattgacggtggggagtatccaagatcaggctccatgcagatc
aacgtcagagtgactgattccaatgacaatagccccgtttttgaaaaatcctcgtacata
atagagattccagagaattcaccgcctggaaaagtacttatagatttgaatgccactgat
caagatgagggcagcaacggccaggtggtctattccttcactggatacgcatccgagaga
atccaagatttgttctccattgaccccaataccggtgtcatcaaggtgcagggagaaatt
gactatgaagagaatccaatcatagagttcgacgtgcaggctaaagatttggggcccaac
ccgatacccggccactgtaaaattacagtcaaagtgctggataaaaatgacaactcgcca
attataagttttgtttccgtccgacaaggtgccatcagcgaggcggcaccttcagaatcc
gtcatagcgctggtcagggtgacggataaagattctggacgaaacggtcagcttcagtgc
cgagtgctgggaaacgtccccttcaggctgcaggagaacaacgacaatttttatacgctt
ctcacagacagacctctggacagggaaatgaaagatgaatacaatgtgacaatagtggcg
agagataatgggatcccctctttgaactacaccaagtcatttactgtgaaaatcttggat
gagaacgacaatccgccacgctttacaaagactatttatgtgctacaggtgcctgagaac
aacatcccgggggagtatctgggctccgttctagcccacgacccagatgttggtcgaaat
ggaacagtgtcgtactccattctgccatcgcatatcggagatgtttcagtgtacacctat
gtgtctgttaatcccactaatggagccatatatgcctcgcgctctttcaattatgagcaa
acaaaatcctttgagttcaaagttcaggcgaaagacggaggatctccccacatggagagc
acttctatagtcagggtcaacatccttgacgttaacgacaatctcccagttattatttta
cccctcctgcagaatgatacagcggaaatcccagtgcctagaaatgtaggtattggctac
attgttactactgtgaaagcggtggaccacgaccacggagaaagtggccatttaacctac
gagatcacagagggaaacgacgaccacctgtttgaaatggatccagtgggaggagaggtc
agaactgcccatgctctgtgggaggaagtcgccccagtggttgagctggtggtgaaggta
actgaccatggcaagccccccttatctgccgtcgctaagctgatcattaaggcgaacaca
gaaacggcaccaggagggggtgccagcacgagcggggaacagcagcactgggatgtatcc
ctgcccctcatagttaccctctgcattatctctgtcatgctcttagcagtcatgaccgcc
atcgctgtcaagtccaagcatcaagataaggagactgggaattataactgccgcatggct
gagtactccaatcctccagtggggaagggcaaaaagaaaaggatcaacaagagtgacatc
atgctggtgcagagtgagatggaggagagagattccgcgagccggatgaacgtggtgagc
agcccctctctcatcacttcacccatatgttttgactaccagagccctctgccactcacg
ctgcccaggtcagaggtcatgtacctgaaaaccaccccaaacagcctgacagtccccagg
gcaggttgccactccagctttgccgggcttagcacagacactccagcgaataggatgtca
gtgatacagacagaaaatttcacctcagagtccaattacgctggcagcaggcaaccgttc
gttcaaagctcaacatttaaggatgcagaacgagcaagcctccgagacagtggccatggt
gatagtgaccaggctgatagtgaccaggatactaataaaggctcacactgcgacacgtct
gccagagaggccctcaagatgaaagcaacagcggtaaatggccagccttttgagcaggag
caagacaaatcagtccactgcaccgatgaatgtcgtgcactgggacattctgacagatgc
tggatgccaaagttacgggtaggaagccaagcagacagcgccgataatcgcaccaacctt
ttcatccctgtgggaatggatgccatggtagagacagagatttatggcaccatcagttgc
agcagcagaaaaaccctcagcacgtttgggaaggagcagcgggacagtacaatcctcgtg
gccaatgtcaaaccttacttaaaatcgcagcgtgcactaagcccaccgctacaggagagt
ccatctgtgtccagcagtcccagcaagagcagcatgcccctggacttggccaaccaaggg
tccaaagaggagagggaggggggttcaaacagcagtgcctacggccctccagatggccag
tgctccccactgcacactgaattggaggagccgtcctacctgacctgcgagctcaggccc
aagtccctgtccagcagtctcattcacagctccgtcatcagccaggagtgcggggggtca
gattacgctctcgacccgcgggacactggcaactga
DBGET
integrated database retrieval system
