Hippoglossus hippoglossus (Atlantic halibut): 117755163
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Entry
117755163 CDS
T07778
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a isoform X1
KO
K23455
collagen type VIII alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
117755163
NCBI-ProteinID:
XP_034430607
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Position
21:complement(17147590..17172951)
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AA seq
808 aa
AA seq
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MSCMDELSLTAQDPFLAFWTHSWSRGHEKRETIEAASTHQVTSYLVNPRVSRDSDVIVGQ
TQILAMVPLPAPLSLTVLQLAALTYVCGGAYYGHKQHPQPYQPVQHHQHMGMGKEGFPQQ
QYLGKEVPYMQYPQYRKELPQMPMHKGKENARKGGGYKGGQDKGQTIPSGAEGIPQGEPG
PAGPPGPEGPPGPPGLPGNGQPGSVGQPGPSGPPGVPGMGKPGLPGLPGKPGGNSEAGPQ
GEMGPRGENGPSGQPGPQGTPGPPGLPGIGKPGMQGLPGQPATKGEPGHKGLPGLPGLPG
PKGDKGMGQPGQPGHKGLPGPNGPAGPRGLPGFGKPGLNGAPGPHGQPGEKGHPGEQGPA
GPPGEGGQPGPLGLPGQGKPGQNGLPGQPGMSGAKGHPGAPGLPGKPGLPGFGKPGLPGP
KGDKGMGGPPGLPGPKGEKGHGGLPGMLGSPGPNGPPGPPGPLGPLGGIGSPGPKGDCGE
GGPKGLDGGQGEPGPPGIHGKDGLPGDNGEPGPRGPPGPSGVKGDDGHKGLPGTSGPPGH
PGLKGHGGLPGEVGPQGPKGIPGMDGAAGPIGPAGLPGAKGDGGLPGLPGIVGQGSPGIS
GPIGPQGKEGPLGPPGKPGQPGLPGPPGPAGATGLSPDMAGVLSEMGPGLDGVKAGSYDK
KGKYGGNGAEVMGVSGLEMPAFTAVVTTPFPPVGTPVVFDKLLYNGRQNYNPQTGIFTCD
MPGIYYFAYHIHCKGANVWVALMRNNEPVMYTYDEYKKGFLDQASGSAVLPLQPGDTVYI
QLPSDQASGLYAGQYVHSSFSGYLLYPM
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcatggacgagttatctctgaccgcccaggatcctttcttggctttctggaca
cattcctggtccagaggccatgaaaagagagagaccattgaagcagcctcgacccaccag
gtcacctcataccttgtaaacccccgtgtctcccgggacagtgatgtcatcgttggacag
acccagatcttggccatggttcctctccctgcccccctctcccttactgtgctacagctt
gcagcactgacttatgtgtgtggtggtgcatactacgggcacaagcaacaccctcagcca
taccagccagtgcagcatcaccaacatatgggaatgggcaaagaaggctttccccagcaa
cagtaccttggaaaagaggtgccttatatgcagtatccacagtacaggaaggagctacca
cagatgcccatgcacaagggcaaagaaaatgctcgtaaagggggtggttataaaggcggt
caagataaaggacagacaattcccagtggggctgaaggaattcctcaaggagagcctggt
ccagctggaccacctggaccagaggggcctccaggtcctcctggacttccaggaaatgga
caaccaggatctgtggggcaacctggaccttctggtccaccaggagtgcctgggatggga
aaaccaggtttgccagggctgccaggcaagccaggaggaaatagtgaggctggaccacag
ggtgaaatgggtcccaggggtgagaatggaccatctggacagccaggacctcagggtacc
ccaggaccacctgggctaccagggataggtaaaccagggatgcagggactaccaggtcaa
ccagcgacaaaaggagaaccaggtcacaaaggtctaccaggactaccaggattaccagga
cccaaaggtgataaaggaatgggtcagccaggacaacccggtcacaaaggtctcccaggg
cccaacggaccagccggcccaagaggactgcctggttttggaaaaccaggcttgaatggg
gcaccaggcccacatggacaaccaggagagaaaggacatcctggagagcaaggaccagct
ggaccacctggtgaaggaggacagcctggcccactaggactacctggtcaaggaaagcca
ggtcaaaatggccttccaggacagccaggtatgtcaggtgccaaaggacatccaggagca
ccaggtttgccagggaagccaggactgcctgggtttggtaaaccagggctcccaggacca
aagggtgataaaggtatgggtggtccacctggactgccaggcccaaaaggagaaaaggga
cacggaggactgcctggtatgcttggatcccctgggccaaatggtccaccaggtcctcca
ggtcccttgggaccactggggggtataggttcccctgggcctaaaggagactgtggggaa
ggagggcctaaagggcttgatggaggccagggtgaacctggtcctcctgggatacatggt
aaggatggtctgcctggagacaatggagaaccagggccaagaggtcccccagggccaagt
ggtgtcaaaggagatgatggacataaaggtctacctggtacatctggtcctccgggacat
ccagggctaaaaggacacggtggactacccggtgaagtgggacctcaaggccctaaagga
atcccaggaatggatggtgcagcaggaccaattgggcctgctggtcttcctggggcaaaa
ggagatggtggtctccctggtctaccgggaattgtaggtcaggggagtcccggtatttct
ggtcccataggaccccaaggaaaagagggaccattaggaccccctgggaaaccaggtcag
cctggccttcctggaccaccaggcccagctggagcaactggactgtctcctgacatggct
ggagtactctccgaaatgggccctggactagatggtgttaaggctggtagttatgataag
aagggcaagtatggcggcaatggggcagaagtaatgggtgtcagtgggttagaaatgcca
gcattcacagctgtagtaacaactccctttccacctgtcggcactccagttgtctttgac
aagctcctatacaatggtcgccaaaactacaacccccagacaggaattttcacctgtgac
atgcctggcatttattactttgcctaccacatccattgcaaaggagccaatgtgtgggtg
gctttgatgaggaacaatgagccagtgatgtatacgtatgatgaatacaaaaagggtttc
ctagaccaagcgtcagggagtgcagtgctacctctccaacctggagacactgtgtatatt
caactgccctcagatcaggcttcaggactttatgctgggcagtacgtgcactcctccttt
tctgggtatttgttgtatccaatgtaa
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