KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117755305
Entry
117755305         CDS       T07778                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04137  Mitophagy - animal
hhip04144  Endocytosis
hhip04145  Phagosome
hhip04148  Efferocytosis
hhip05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117755305 (rab5b)
   04145 Phagosome
    117755305 (rab5b)
   04137 Mitophagy - animal
    117755305 (rab5b)
   04148 Efferocytosis
    117755305 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117755305 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hhip04131]
    117755305 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hhip04147]
    117755305 (rab5b)
   04031 GTP-binding proteins [BR:hhip04031]
    117755305 (rab5b)
Membrane trafficking [BR:hhip04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    117755305 (rab5b)
 Endosome - Lysosome transport
    117755305 (rab5b)
Exosome [BR:hhip04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117755305 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   117755305 (rab5b)
  Exosomal proteins of colorectal cancer cells
   117755305 (rab5b)
  Exosomal proteins of melanoma cells
   117755305 (rab5b)
GTP-binding proteins [BR:hhip04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    117755305 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16
Other DBs
NCBI-GeneID: 117755305
NCBI-ProteinID: XP_034430876
LinkDB
Position
21:complement(1782220..1786318)
AA seq 216 aa
MSSRGSGGRTNGSLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAEKRLVEYEEAQTYADDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagctccagagggagcggtggccgcaccaacggctcactaccccagaccaagatctgc
cagttcaagctggtgctgctgggggacatggccgtgggcaagtccagcctggtgctgcgc
ttcgtcaagggacagtttgatgagttccaggagacgaccatcggagctgctttcctggcc
cagtctgtgtgtctagatgacaccacagtgaagtttgagatctgggacaccgccggacaa
gagcgataccacagcctggcgcccatgtattaccgcggagctcaggccgccatcgtcgtc
tttgacatcaccaagccggagacgtttgagcgagccaaggcctgggtgaaggagctgcag
cgacaggccagtcctaacattgttatcgccctggctgggaacaaggcggacctggcagag
aagagactcgtagagtacgaggaagctcagacgtatgctgacgacaccggcctgctcttc
atggagacctcggccaagacggccatgaacgtcaacgagctcttcctggccatcgcaaaa
aagatgccaaaaacagacacccagaacccgacacatgcagcgcggcatcgcggcgtcaac
ctccaggacccagacgctcactccacccgggcctgctgcggtgggaactag

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