Hippoglossus hippoglossus (Atlantic halibut): 117755349
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Entry
117755349 CDS
T07778
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117755349 (stxbp5l)
Membrane trafficking [BR:
hhip04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117755349 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
117755349 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_Prp19
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Lgl_C
Synaptobrevin
Beta-prop_NUP159_NUP214
GUB_WAK_bind
Motif
Other DBs
NCBI-GeneID:
117755349
NCBI-ProteinID:
XP_034430953
LinkDB
All DBs
Position
21:complement(7398682..7522274)
Genome browser
AA seq
1268 aa
AA seq
DB search
MKKFRKVLDGLTTSSPGGTIGSPSCGSAAGTPTSAPTPKEIDVQETLVSENFQLCKTVRH
GFPYQPTALAFDPVQKILAIGSRTGGVRILGRPGVDCYCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERVTFCHLPFQSKWLYVGTERGNTHMVNIESF
ILSGYVIMWNKAIELATKTHPGPVVHLSDSPKDEGKLLIGFESGTVVQWDLRCKKADFRI
YYDEAIHSVSWHHEGKQFMCSHSDGSLTMWNLRNTTKPFQVTYPHGKIQRDGRKESCKPI
LKVEYKTSRSSEPFIVFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYPIVEFMVLCETPY
NNEVQEPSAVVVLLEKDLIVVDLTQSNFPVFENPYPMDVHESPVTCTAYFADCPPDIIPI
LYSIGAKHKKTGYSQKEWPISGGTWTLGSQTYPEVIITGHADGSIKFWDASAITLQMLYK
FKTSKVFEKPKPGEGRAADLVEEDPFAVQMVSWCPQSRIFCVVGISAHIILYRFSKYDAN
TQIVCLDIRLQCESDDVITPSENENNPCFPEPGSHSPQAPHPASPSSGTPEGVKDSIPCL
KVKDRVVRVPPGYQAELVIQLLWVDGEPPQQISTLDINSAYGLLAFGNCNGLAIVDYLQK
TILLCMSTLDLYGASDPYQRLTRSPRRNRQSTSEFSMRGLSNFYSDSKKRIRTSYQSLTE
LSDNQQSIDMERSKSPTSVQYPTSLHNDPRVLPEPVASLRASHCSPVFYLLDNVKGPGRK
LSLPTDLKTDLDHVNGHCTSPTSQPCSAGKPRVPMGPEGPRLTRRGPGRPPFRKAQSAAC
MEISLPVSHTEGYASRRAMLQQLHGVSMYSHDEHHSSSAYCWNEKAAESRENSFSRSRSS
SVSSIDRDTKEAITTLQFGESYGRKSDALPTPCLWVGTSLGVVVLIPMSIPTDQEERMEE
AVTIGPCGTVLMLKGSVLRFGFLDCMGAVIQSPYEAWRDPNASEDPDRPRRRKLVNFSPS
SSQDTCGDGHLAVVCSEKQAKVILMPSQSCLFVHNITESSFVLRADVVSACNSVCLACFC
ANGHVMTLSLPSLRPLMDVNYLPLTDMRIARTFCFTNGGQALYLSSPTEIQRITYSQEMC
DNLQEMLGELFTPIETPEAQNRGFLKGFFGGNANTVDREELFGEASAGKASRSLAQHIPG
QGGMEGMKVAAGGVVGDLARARIALDERGQRLGELEDRTALMMTSAESFSKHAHELMLKC
KDKKWYQL
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcggaaggtgctggacggcttgaccacctcctctccgggggggactatc
gggtccccatcgtgcggcagcgcggcggggactcccacctcggcgccgacacctaaggag
atcgacgtgcaggagacgctagtgtcggaaaactttcagctgtgcaagacggtgcggcat
ggtttcccttaccagcccacagccttggcctttgaccccgtgcagaagatcctggccatc
ggctcaagaacaggcggtgtacggatactgggacgacctggggtggactgctactgtcag
cacgagagcggagcagctgttcttcaactgcagttcctcatcaatgagggagcgttggtc
acagcctgtgcagatgacacgctacacttgtggaatctgcgtcagaggcggccggcgatc
ctgcattcactcaagttcaacagagagagggtcacgttttgccaccttccctttcagagt
aaatggctgtacgtggggacggagcgtggaaacacacacatggtcaacatcgagtccttc
attttgtccggatacgtcatcatgtggaacaaggccatagaactagcaactaaaactcat
ccaggacctgtggttcatttgagcgacagcccaaaggatgaaggcaagctgcttataggg
tttgagagcgggacggtcgtacaatgggacctccggtgcaagaaggctgacttcagaatc
tactacgatgaggccatccactccgtgagctggcatcatgaagggaagcagttcatgtgc
agtcactcagacggcagcctgaccatgtggaacctcagaaacaccaccaagccattccag
gtcacctaccctcacggtaagatacagagggatgggaggaaggagtcgtgcaaacccata
ctcaaagtggaatacaagacctcaaggagcagcgagccttttattgtcttctccggggga
ctttcgtatgacaaggcaggacggcgaccgacgttaaccatcatgcacggcaaagccatc
accgtgctggagatggactatccgattgtggagttcatggtgctctgcgagactccttac
aacaacgaggtgcaggagccttctgcagtggtggtgcttctggagaaggacctgattgtt
gtggatctgacacagagcaacttcccagtctttgagaacccttaccccatggacgtccat
gagtctccagttacctgcacagcttattttgcagactgtcctcccgacatcatccccatc
ctctactctataggagctaaacacaagaagactggctacagtcagaaggagtggcccatc
agtggaggaacgtggacgttgggctcccaaacctacccagaagtcatcatcacaggacat
gctgatggatctattaagttttgggatgcatctgcaatcacgttgcagatgttgtacaag
tttaaaacctccaaagtgtttgagaagccaaagcctggcgagggccgggccgccgatctg
gtggaggaagaccctttcgcggttcagatggtcagctggtgccctcagagtcgcatcttc
tgtgtggttggcatctcagctcacatcatcctctatcgattcagcaaatacgatgccaac
actcagatagtgtgtctagacatacgcctgcagtgcgagtcggacgatgtcatcactccc
tctgagaatgaaaacaatccctgcttcccagagcccggctcccactctccccaggcccca
cacccagctagccccagcagtggaacaccagagggagtcaaagacagcatcccctgcctc
aaagtgaaagaccgggtggttcgggtcccccctggttaccaggcagagctggtcatccag
ctgctgtgggtggatggagaacctccacaacagatcagcaccctggacatcaactctgcc
tatggccttttggcgttcgggaactgcaacggccttgcgatagtggactacttgcagaaa
accatcctgttgtgtatgtcgacactggatctgtacggagcctccgacccctaccagcgc
cttacccgctccccccgcaggaacagacagtccacctcagagtttagcatgcgtggcctg
tctaacttttattcagattcaaagaaaaggatccgtacatcctatcagagccttactgaa
ctctctgacaaccagcaatccattgacatggagagaagcaagtcacccacttcagttcaa
tacccaacctcccttcacaatgacccacgtgtgctgcccgagcctgtggccagtctgaga
gccagccactgcagtccagtcttttacttgctggacaatgtaaaggggcccggcagaaag
ttaagtctgccaacagatcttaagactgatcttgatcatgtcaatggacattgcactagc
cccacctcccagccctgctcggcggggaagcctcgcgtcccaatgggtcccgaggggcca
cggcttactcgcagaggccccggccgaccgcccttccgcaaggcccagtctgctgcttgc
atggagatctctttgcctgtgtcccacactgaaggttatgcatcgaggagggcgatgctt
cagcagttacacggagtctctatgtactcccacgacgagcaccacagctccagcgcctac
tgctggaatgagaaagctgcagagagtcgtgaaaactccttcagccgctcgcgcagctcc
agcgtgtccagcatcgaccgggacaccaaagaggcaatcaccacgctgcagtttggagag
tcctacgggcgcaagagtgatgccctgcctaccccgtgtttgtgggtgggcaccagcttg
ggcgtggtcgtgctcatcccgatgtccattcccactgaccaggaggagaggatggaggag
gcggtcaccattggcccctgtggaacggtcctgatgctgaagggctcagtgctgcgcttt
ggcttcttggactgcatgggggcggtcattcagagcccttacgaggcttggcgggacccc
aacgcctccgaggaccccgatcgaccgcggaggcgcaagctggtcaacttttcaccgtcg
tcgtcccaggacacctgcggggacggacatctggccgtggtgtgctccgagaagcaggcc
aaagtgatcctgatgccctcgcagtcttgcctctttgtccacaacatcacagagtcgtcg
tttgtgctgcgcgctgacgtggtgtccgcgtgtaacagcgtgtgcctcgcctgcttttgt
gccaacggtcacgtcatgacactcagtctgcccagtctaagaccgctgatggatgtcaat
tacctgcctctgacagacatgcgcatcgcaagaaccttttgcttcaccaacggggggcag
gctctctatctcagctccccgacagagatccagagaattacatacagccaggagatgtgt
gacaacctgcaggaaatgctcggagagctgtttacaccaatagaaacgccagaggcccag
aacagaggctttctgaagggcttctttggaggaaacgccaacaccgtcgacagagaggag
ctcttcggtgaggcatcagctgggaaggcgtcccgcagtctggcgcagcacatccctggc
cagggggggatggagggcatgaaggtggcagcggggggagtcgtgggggatctggctcgg
gcccgtatagctctggatgaaagaggccagagactgggggagctggaggatcgaaccgct
ctcatgatgaccagtgcagaaagcttctccaaacacgctcatgagctgatgcttaagtgc
aaggacaagaagtggtaccagttgtaa
DBGET
integrated database retrieval system
