Hippoglossus hippoglossus (Atlantic halibut): 117755424
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Entry
117755424 CDS
T07778
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117755424 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117755424 (u2af1)
Spliceosome [BR:
hhip03041
]
Complex A
U2 snRNP components
U2 related factors
117755424 (u2af1)
Complex B
117755424 (u2af1)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
117755424
NCBI-ProteinID:
XP_034431115
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All DBs
Position
21:18615130..18622752
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AA seq
257 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ
SADGLTCAISDMEMQEHYDEFFEEVFAEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRYE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKGRHRSRSRSRERRSRSRDRGRGGGVGGGGGGGGGGGGGGGAGAGGGGGG
RDHERRRSRDRERSGRF
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtacctggcgtccatttttgggacagagaaagataaggtcaactgctctttt
tattttaaaattggtgcctgtcgacatggagaccgctgctccagattgcacaataagcca
actttcagccagacaattgccctcctgaacatttaccggaacccccaaaacagtgcccag
tctgccgatggactcacctgtgccatcagtgacatggagatgcaggagcactatgacgag
ttttttgaggaggtcttcgcagagatggaagaaaaatatggagaagtggaggagatgaac
gtatgtgacaacctcggggaccacctagtcggaaatgtgtacgtaaagttccgttatgaa
gaggacgctgagaaggccgtgattgacctgaataaccggtggtttaacgggcagcccatc
catgctgagctctctcctgtcacagacttcagagaagcttgctgtcgccagtatgaaatg
ggggaatgtactcgtggtggcttctgtaacttcatgcacctgaagcccatctcacgtgaa
ctgaggagagagctctacgggcgccggaggaagggccgtcatcggtctcgttcccgatca
agagagagacgatctcgctccagagacagaggtcggggaggtggtgttggaggaggaggt
ggtggtggtggaggaggaggaggaggaggaggagcaggagcaggtggaggaggaggtggc
cgtgaccacgagaggcgtcgctccagagacagagagcgttcagggcgattctga
DBGET
integrated database retrieval system
