Hippoglossus hippoglossus (Atlantic halibut): 117755462
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Entry
117755462 CDS
T07778
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117755462 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
hhip04050
]
117755462 (edar)
Cytokine receptors [BR:
hhip04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117755462 (edar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
117755462
NCBI-ProteinID:
XP_034431194
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Position
21:complement(9268778..9301009)
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AA seq
520 aa
AA seq
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MSERRGQKKSIFLSLLVCCMFASAEYSTCGEYEFFNQTSNSCQACPQCQPGQEPHMTCGY
GVKDEDFACVPCPHGKYSKGKYEICRRHKDCDALYKATVRAAGTPDSDAECGPCLPGYYM
LENRPRNLYGMVCHSCQNAPRNTKECKQSSKPKEKPPIDPGSTTVFPHPDKGTNGQGHLA
TALIIAMSTIFIMAIAIVLIIMFYILKAKPSGQACCSGQVVKAVEAQTIKQEDKKDVPDK
VVIYSEKDEFDKLKVPPQKTVKSENDASSENEQLLSRSIDSDEEAASDKQGSADTNNTNP
CLVNLGNKPDLCLLSLGLHESDHTCNGSPTIMSGQANNATSPNHVGNVNHIASNNHISNM
NAINNNNKTPGMLQSRRKKILDLYARACNVTEGLSPTELPFDCLEKTSRMLSSSYSSEAA
VVKTWRHLAESFGLKRDEIGGMSDGLQLFERVSTAGYSIPDLLTRLVQIERLDAVESLCS
DVLGGGEMTVVNGRQGISSFHSQLVCQSQYPSPSQRCASV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaggagaggtcagaagaagtccattttcctgtcattattagtgtgctgcatg
tttgccagtgcagagtattccacctgtggagagtacgagttcttcaaccagaccagtaac
agctgccaggcctgtcctcagtgccagcctggacaagagccgcatatgacctgcggctat
ggtgtgaaggatgaggactttgcctgtgtgccgtgtccgcacgggaaatattccaaaggg
aagtacgagatctgcagacgccacaaagactgcgacgccctctacaaagccacggtgcgg
gcggcggggactccggacagcgatgccgagtgtgggccgtgtttaccggggtattacatg
ctggagaacagacccagaaacctctatgggatggtgtgccactcctgccagaacgcaccg
cgcaacaccaaagaatgcaagcaaagcagtaaaccaaaagagaaacctcctattgaccct
ggcagcacgacagtgttccctcacccagataaaggtaccaatggacagggtcacctagcc
acagctctcatcatcgccatgtcaaccatattcatcatggccatcgccatcgtcctcata
atcatgttttacatcctgaaggccaagccgagcggccaggcatgttgttctggacaagtt
gtgaaggcagtggaggctcagaccatcaaacaggaagacaagaaagatgttccagacaaa
gtggtgatctactcagaaaaggacgagtttgacaaactgaaagttcccccgcagaagacg
gtcaaaagtgaaaatgatgcgtcatcagagaacgagcagctgctaagccgcagcatcgac
agcgacgaggaggctgcgtccgacaaacagggatcagccgacaccaacaacaccaacccg
tgcctggtcaacctgggcaacaagcccgacctctgcctcctctctctggggctgcacgag
agcgaccacacctgcaatgggtcccccaccatcatgtccggccaggccaacaacgccacg
agtcccaaccacgtcggcaacgtcaaccacatcgccagcaataaccacatcagcaacatg
aatgcgatcaataacaacaataaaaccccagggatgctacagagtcgaaggaaaaagatc
ctggatctatacgccagagcctgcaatgtgacagagggcctgagccccacagagcttccc
ttcgactgtctggagaagaccagccgcatgctgagctcctcctacagcagcgaggcggcc
gtggtaaagacgtggaggcacctggccgagagcttcggcctgaagcgcgacgagatcggc
ggcatgagcgacggcctgcagctcttcgagagggtgagcacggcgggctacagcatccct
gacctcctgacccgcctggtgcagatcgagaggctggacgccgtggagtcgctctgctcg
gacgtgctgggcggcggcgagatgacggtggtcaacgggaggcaaggcatcagcagtttt
cacagccaactggtgtgtcaatcccagtacccgtcaccctcccaacgctgcgccagtgtc
tag
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