Hippoglossus hippoglossus (Atlantic halibut): 117755544
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Entry
117755544 CDS
T07778
Symbol
six4a
Name
(RefSeq) homeobox protein SIX4a
KO
K15615
homeobox protein SIX4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117755544 (six4a)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
117755544 (six4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
DUF6374
Motif
Other DBs
NCBI-GeneID:
117755544
NCBI-ProteinID:
XP_034431310
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All DBs
Position
22:12720814..12726162
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AA seq
677 aa
AA seq
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MSSSAGEVTTANDIKRENVKELDERECIKFVALDAAELSMERTAPNADAVRTELLVSAAS
SLAFSPEQVACVCEALQQGGNVDRLARFLWSLPQSDLLRGNESILKAQALVAYHQARYQE
LYSILENHSFSTSNHTFLQELWYKARYTEAEKARGRPLGAVDKYRIRRKYPLPRTIWDGE
ETVYCFKERSRNALKDLYTQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSEA
QSKSESDGNHSTEDESSKGQDEMSPRPLSNSSDGVIHHGIQTGHLDGGVVIQQIGDIKMP
PGSSSGGLYNGSLVTSNTSSSVFHNGGSSYLHTPGNILFNGLNLGIQPLAFNPLRPSGGV
LLGSSGVDMQMHTGQEKGLGSSAEDSNLHYASYSGCVNGADVKLEGAHSMAAQNGGSSVL
TFSSSSGALQLGGYSLVHVPSGVSDSDGSSLLNSDVGLSPLQLSSASSASTIPQQGTIPL
DNVAVSSSSDDSFQQQDKMTMSSLHHSTVLYSMSNAGQTSIKKEPLEGGVYSSYHHGLHL
DHSGQISYTTPNSEEAPSSQGSTRTNGVPTITSSSPEPEVYTTLTISTPLMAHTDTGSHH
LQPTEYLGVHEIRGHPPSHLMGPGMNSNYMNLSENKVDGSGGMNEMVRAMCGEMEAVEGK
ELAKLQTVQMDEDMADL
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttctgccggagaagtcacaacagcgaatgacatcaagagggaaaatgtgaag
gagctggatgagcgggagtgcatcaagtttgtggcgctggacgcggcggagttgtccatg
gagcgcacggctcccaacgctgacgcggtgcgcacggagctgctggtgagcgccgcgtcc
tccctggctttctccccggagcaagtggcgtgcgtgtgcgaggctctgcagcagggaggc
aatgtggaccggctggccaggttcctgtggtccctgccacagagcgacctgctccgcggc
aacgaaagcatcctgaaggcgcaagcgctcgtcgcttaccaccaggcgcggtaccaggag
ctgtacagtatcctggagaaccacagcttcagcacgtccaaccacacctttctgcaggag
ctgtggtacaaggcccggtacaccgaggcggagaaggcgcgggggagaccccttggcgcc
gtggacaagtaccggatccggagaaagtaccctctccccaggactatctgggacggcgag
gagacggtgtattgtttcaaggagaggtctcggaacgcgctgaaggatctgtacactcag
aataggtacccctctcctgccgagaagcgaaacctcgccaagatcacaggactctccttg
acccaggtcagcaactggttcaaaaaccggaggcagagagacagaaacccgtccgaggct
cagtccaagagtgaatctgatggaaaccacagcacagaggatgagtctagtaaaggccag
gatgagatgtcaccccggcccctctccaactcctcagatggggtcatccaccatgggatt
caaacagggcatctggacggtggggtggtcatccagcagatcggggacatcaagatgccc
cccggatccagcagtggcggcctctacaatggaagtctagtgaccagtaacacctcatct
tccgtcttccacaatggcggctcgtcttacctccacacacccggaaacatcctcttcaac
gggctcaacttgggcatacagcccctggccttcaaccctctgaggccgtcaggaggggtg
ctgctggggagctctggggtggacatgcagatgcacacagggcaggagaagggactgggc
agttctgcagaggactccaacctgcactacgcctcctactccggatgtgtgaatggagcc
gacgtgaagctggagggggctcactccatggccgcccagaacgggggctcctccgtgctg
acgttcagctcctcgtcaggtgcgctgcagctgggcggctacagtctggtgcacgtaccg
agcggagtgtctgacagtgacggcagctcattactcaacagtgatgtgggtctttctccc
ctgcagctctcctcagcctcctcggcctcaacaatcccacaacaaggaaccatacctctg
gacaacgtagcagtgagttcctccagcgacgactcgttccagcagcaggacaagatgacc
atgtcgtctctgcaccacagcactgtcctctacagcatgagcaacgccggccagacgtcc
atcaagaaggagcctttggagggaggcgtctactcctcctaccaccatgggcttcacctg
gaccacagtggtcagatcagctacaccacccccaactctgaagaggccccctccagccag
ggttccacccgaaccaacggcgtccccactatcacctcgtccagccccgaaccggaggtc
tacaccaccctcaccatcagcacgcccctgatggcccacacggacacgggaagccaccac
ctccaaccgacagagtacctaggggtccacgagatccgggggcatccaccctcgcacctg
atgggccccggcatgaacagcaactacatgaacctgtcggaaaacaaggtggacggctca
ggaggcatgaatgagatggtgcgggcgatgtgcggggagatggaggctgtggaagggaag
gagctggccaaactacagacagtgcagatggacgaggacatggccgacctttaa
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