Hippoglossus hippoglossus (Atlantic halibut): 117755562
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Entry
117755562 CDS
T07778
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04517
IgSF CAM signaling
hhip04520
Adherens junction
hhip04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117755562
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117755562
04530 Tight junction
117755562
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Gene cluster
GFIT
Motif
Pfam:
DIL
PDZ
RA
PDZ_6
PDZ_2
RA_3
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
117755562
NCBI-ProteinID:
XP_034431340
LinkDB
All DBs
Position
22:5052816..5064950
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AA seq
1218 aa
AA seq
DB search
MPEEEEREKLAKVIRQWNNNRLDLFEISQPDEQNLEFHGVMRFYHENHDEGNVATKCLRV
CSNSSTREVIEILSEKFRPDMKMLTSSYSLYEIHAKKERKLGQDEKPLIVQLNWSSDNRE
GRFVLKKDKETSQEMSPEKERGGIIQNFKRTLSRKDKKTEKNKAKAADKVQGDEKGSTEK
LLNNQEANHGTENQKQQRQAADQPGLPLGIKLCDNSEEAFLSAVINYTNSSTVHFKLSPA
YILYAVGRFTLRRHHRQGSPRSGQTHGVTSITGKMVAMTRKVIQRQQTIAGALAFWMANS
SELLNFIKHDKDLCPLTQQSQLDLAHLVHRAYSCLLQCLQNELTKHLPTFLFDPEQHGPL
PAGIEMVLNTFMNTMSLLRRCRVNPALTIQLFSQLFHFISAWLFNRLMSPAATAPGLRSH
YWGAALRQRLTGIEAWAERQGLELAADCHLGHIIQATALLTMNKYSMQEAKDIQNTCFKL
NSLQLQTLLAGYLYANTEPHIPPDLIDAVVAAAEASADSLIDSEGRDIQLEESLDLHLPF
LLPEGGYSCDTVRGIPHGFREFLEPICRKGLCSITSQPNPKGDWTVYFCESSPPTENIYL
AAHREPEVVTITLKKPLNSGMGVSIVAAKGAQQGNLGIYVKSVVQGGPAEMNGRLAAGDQ
LLSVDGQSLIGLNQERAAAIMVQTGPVVTLQVAKLGASFHGLAALLSEPAPTTTTGDTIF
AKPNGEALVLYRAVDPGPSGHQLHGGSRRKKELMQRNRQLFRSNPNMTTDLCLEDGDELV
DPVVRGNNMAAVSTTNLCTDTFHREYLTLPTPKSQDKNVSESSRPQQTLVSLGPLSGSSC
SKKMYMRQALSQENLCMESGGPLLDKRGKDTSAKHTMSHYSSFPIRSSVSTHDILADYSS
PVKHQQGIRTSGAGVWRAPFSQHPTSTPSAQPIRIDIPITRAVNTNPPLTTFQSPALLST
NMSPTPKINGHNQIPHHQAHLIYACPISAVKKLPRPSLSSQQHRPGIFRGQAVKPQVSIP
PTKHVSFQEPPTQQRQGTGAPKHRGPQELSDPWRREMQEKLEKQHRLQAVELLEQEVQEL
QAKVKRSAEENDRLRKLSLEWQFQKRLREIQQRGDDEEDEYEDLDMMVAIQQLEARTPDK
RSSGGNINSELKELNQQTGNHILQKEDKANIGHRPTGQTEHVHNVASKENQEEKIKSPDP
EKLTFRERQRLFSLASSA
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggaggaagaacgagagaagttagccaaagtcatcagacagtggaacaacaac
agactggacctgtttgaaataagccaacctgacgagcagaatctggagtttcacggtgtg
atgcgtttctaccatgagaatcacgacgaggggaacgtggctacaaagtgcctgcgtgtt
tgcagcaactcttcgactcgtgaggttattgaaattctctcggagaagttcaggcccgat
atgaaaatgctgacttccagttattccctttacgagatccacgccaagaaggaacgcaaa
ctagggcaggacgagaaacctttgattgtacaattaaactggagctcagacaacagagaa
ggacgctttgtgctcaagaaagacaaggagacttcccaggaaatgtctcccgagaaggag
agaggaggcatcatccaaaacttcaagaggacgctgtcaagaaaagacaagaagacggag
aagaacaaagctaaagctgctgacaaggtccaaggagacgagaaggggtcaactgaaaaa
ctactcaacaaccaggaggcaaatcacggcacagaaaaccaaaagcagcagaggcaggct
gcagatcagcctggattaccactcgggattaaactctgtgataactctgaggaggccttc
ctgtctgcagtcataaattacaccaacagctccacggtccatttcaagctctcacctgca
tacatcctctatgctgtgggacgcttcaccctgcggcgccatcacaggcaaggctcgccg
cgctcaggacaaacacacggcgtcacatccatcactggcaaaatggtggccatgacacgg
aaggtcatccagaggcagcagaccattgccggggcgctcgccttctggatggccaactcc
tccgagctgctgaatttcatcaagcatgacaaagacctctgcccgctcacacagcaaagt
cagctggacctcgcccacctggtgcacagagcttacagttgcctgctacagtgtcttcag
aatgagttaacgaagcatttgccaacttttctgttcgatcctgagcaacatggccccctg
ccggctggtatagagatggtgctgaacaccttcatgaacaccatgtctctgctgcgccgc
tgtcgggtcaaccccgccctcaccatccagctcttctcccagctcttccatttcatcagt
gcctggctgttcaaccggctcatgagcccagcggccaccgctccaggcctgcgctcccac
tactggggagcagctctccgccagaggctcaccggcatcgaggcctgggcggagaggcag
ggcctggagctggccgctgactgccacctcggacacatcatccaggcaaccgcactcctg
accatgaataagtactcaatgcaagaggcgaaggacatccagaatacctgtttcaagttg
aactcactgcagctgcagacgctgctcgctggctacctctatgcaaacactgagcctcac
atcccccccgatttgatcgatgctgttgtggcggccgccgaggcctcggcagacagcctg
attgacagtgaggggcgggacatccagctggaggagagcctcgacctccacctgcctttc
ctgctgccggagggagggtactcctgtgacaccgtgagaggaatccctcatgggttcagg
gagtttttggagccaatttgccgaaaaggtctctgctctataacatcccagccgaaccct
aaaggtgactggaccgtgtatttctgtgaatcttcacctcctacagagaacatatacttg
gcagcacacagagagccggaggttgtgaccatcacactgaagaaacctctcaacagtggg
atgggggtcagcatcgtggctgccaagggagcacagcagggtaaccttgggatttatgtc
aaatctgtagtccagggaggaccagctgaaatgaatggaaggttagcagctggagaccag
ctgctcagtgtggatggtcagagcctcattggcctcaaccaagaaagggctgctgccatc
atggtgcaaaccggccctgttgtgactttacaggtggcaaagttgggagcgagcttccac
ggcctggcagctctgctgagtgaaccagctccaacaacgactacaggtgatacaatcttt
gccaaaccaaacggtgaagcgctggtgctgtaccgtgcagtggatcctggtccgtcgggg
catcagctccatggaggcagcaggaggaagaaagagctgatgcagaggaacaggcagctg
tttcgctccaaccccaacatgaccaccgacctttgcctggaggatggagatgaactcgtt
gaccctgttgtgagaggaaacaacatggcggctgtgtccaccaccaacctctgcactgac
acgtttcacagggaatacttgacacttccaacccctaaatcacaggacaagaacgtgtct
gagtccagtcgaccgcagcaaacattagtgtctttggggcctttgagtggaagcagctgc
agtaagaagatgtacatgcgtcaggccctctcacaggaaaacctttgtatggagagtgga
ggtcccctgctggacaaaagggggaaggacacaagtgccaaacacaccatgagccactac
tcctcttttccaattcgctccagcgtttccacccacgacatcctcgctgattacagttcc
cctgtaaaacaccagcagggcattcgcacaagtggcgccggtgtctggagggcgccattt
tcccaacatcccacatccacgccttcagctcagcccatacgcatcgacatccccatcacc
agagcagtgaacaccaatcctccactcaccaccttccagagtccggctctgctgtcgacc
aacatgagcccaactcctaaaataaatggacacaatcagatccctcaccatcaagcccat
ctgatctatgcatgccccatctctgcagtcaagaagcttcctcggccttcactgtcgtca
cagcagcacaggcccggcatattcaggggtcaagctgtaaaacctcaagtgagcatccct
ccaacaaaacatgtttccttccaagaacctcccactcaacagaggcagggcacaggtgct
ccgaagcacagaggcccccaggagctgtccgacccctggaggagggagatgcaggagaag
ctggagaagcagcacaggcttcaggcggtggagctcctggagcaggaggttcaggagctc
caggccaaggtgaagcgctcggcggaggagaacgaccgactccggaaactcagcctggag
tggcagtttcaaaagaggctgcgggagattcagcagagaggagacgatgaggaggacgaa
tatgaggatttggacatgatggtggcgatacagcagctggaggcgagaactccggacaag
agaagctctggaggaaatatcaacagcgaactgaaagagttgaatcagcagactggaaat
cacattctccaaaaagaagacaaggcaaacataggtcacagaccaactggacagactgaa
catgttcacaacgtggcatcaaaagaaaaccaggaggagaaaatcaagagcccagatcct
gagaagctcacattcagggagcggcagcgtctcttttctctggcgtccagtgcatga
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integrated database retrieval system
