Hippoglossus hippoglossus (Atlantic halibut): 117755590
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Entry
117755590 CDS
T07778
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04137
Mitophagy - animal
hhip04140
Autophagy - animal
hhip04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117755590
04137 Mitophagy - animal
117755590
04148 Efferocytosis
117755590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117755590
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117755590
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
117755590
NCBI-ProteinID:
XP_034431389
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Position
22:complement(12617066..12629546)
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AA seq
821 aa
AA seq
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MDTGIVPEKKRVSSERRKEKSRDAARSRRGKESEVFYELAQQLPLPHSVSSSLDKASIMR
LTISYLRMRKLLTSDEPVAEEETELDIQLNSSYLKALDGFLIVLSEDGDIIYLTENVNKC
LGLAQFDLTGHSVFDFTHPCDQDELREMLIHRTGSKKTKESNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRVYDTSTEQTSNGLKEPPVPYLVLICDPVPHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQV
STGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCLNFVLSGIQEEKLILSLEQTEDV
MLVKKEQKRQEAEEKVVVESSLPDMSPTLLKEEEEEVEEEEEEAAVEEEEEEEEVEKGEK
GPELDVIKLFTQASKARPLASLYDQLKEKPEALTLLAPAAGDTIISLDFSCPDSEMQLLK
DVPLYNDVMLPSSSEKLALPLSPLPPSEPLNTRGGFKSEESKAESYPPAPSTTITCHSSS
EVRLSELQSFYIINYKCFAHLLICTETLMTFDISSLQADSPMDFCFPMDSDMSSDFKLDL
VERLFAIDTEPKTPFNTQAMEDLDLEMLAPYIPMDDDFQLRSLTPEEPLTCGQVKSLKSS
PVQVTQEVDSYPSSPFSAVGSSTASPAPLGPVIVAHLATIIAKRTPQLDKEVSLRTLAAQ
NAQRKRKLGDLKDMIGQGNLLEEQLVQGKKLKASESGTTTPVLLLSSDLASCLLGSTSEA
TSPLFSLPQLTRYDCEVNAPLQGRQYLLQGEELLRALDHVN
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtacccgaaaagaaaagagtgagctcggagcggaggaaggagaag
tccagggatgcggcgcgaagccggcgcgggaaggagtcggaggtgttctacgagctggcc
cagcagctgcccctgccccacagcgtcagctccagcctggacaaggcctccatcatgagg
ctcaccatcagctatctgcgcatgaggaagcttctcacctctgatgagccagtggcagaa
gaggaaacagagctggatatccagctaaacagctcctaccttaaggctctagatggattc
ctcattgtgctgtctgaagatggtgatatcatttatctcactgagaatgtcaacaaatgc
ctcgggctggcacagtttgacctgactggacacagcgtgttcgacttcacacatccctgt
gaccaggacgagctgcgggagatgctcatccacagaacaggctccaaaaagaccaaggag
tcaaacacagagcgcagcttcttcctccgaatgaaatgcactctgacgagcaggggccgc
actgtcaacgtcaagtcagctacatggaaggttctccactgctcaggtcatgttcgtgtt
tatgacaccagcactgaacagacttctaacggactcaaggagccacctgtcccctacctg
gttttgatctgtgaccccgtcccccacccctccaacatcgaggtccccctggacaccaag
acctttctcagccgccacacgatggacatgaagttcacgtattgtgatgagaggatcact
gagctcatgggttatgatccagaggaccttttgaatcgttctgtgtacgagtactatcac
gctctggactctgaccatctcaccaagactcaccataacttgtttgcaaagggccaggtc
agcacaggacaataccggatgttagctaagagaggaggctttgtgtgggtggaaacccaa
gccactgtcatctacaacaacaagaactcccaaccacagtgtgttgtctgtctcaacttt
gtgctcagtggtatccaggaggagaaactgatcttgtctctggagcagaccgaggatgtg
atgcttgtgaagaaggagcagaagcggcaggaggcggaagaaaaggttgtagtggagagc
agcctgcctgacatgtcaccaaccctgctgaaggaggaggaagaagaggtggaggaggag
gaggaggaggcagcggtggaggaggaggaggaggaggaggaagtggagaaaggggagaaa
ggcccagagctggatgtgatcaaactcttcacccaggcgtccaaggcccggccactggcg
agcctgtacgaccagctgaaggaaaagcctgaggccctcaccctgctggccccggctgct
ggagacacaatcatctccctggactttagctgccctgattcagagatgcagctgcttaag
gacgtccctctctacaacgatgtcatgcttccctcctcgagtgagaagctggctctgcct
ctctcccccctgccgcccagcgagcctctcaacaccagaggaggattcaaaagtgaggaa
tctaaagctgagagctatcctccagctccgtccactacaataacctgccacagctcctca
gaggtcagactcagtgaactgcagtcattttacattataaactataaatgttttgcccat
ttattaatatgcactgagacgttaatgaccttcgacatctcttctcttcaggctgacagt
ccaatggacttctgtttccccatggactcagatatgagctcagacttcaaactcgacttg
gtggagaggctttttgccattgacacagagcccaagacccccttcaacacccaggcgatg
gaagacttggatctggagatgttagcgccctacatccccatggatgatgacttccagctg
cgcagtctgaccccagaagagcctctgacctgtggacaagtcaaatccctcaagagttct
ccagtccaagtcacacaggaagtggacagctaccccagctcccccttcagcgcagtagga
agtagcacagcttccccggcaccacttgggcctgtaatcgttgctcatctcgccaccatc
atcgctaagaggaccccacagttggacaaagaagtctcactcaggactctggcggctcag
aacgcacagcgcaaaagaaaactgggagacctaaaggacatgattggacaaggaaatttg
ctggaggaacaactggtgcagggcaaaaagctgaaagcctcagagtcaggaacaaccacc
cccgttctcctgctgtcttcagacttggcttcttgtctgctgggcagcacgtcagaggcc
accagtcctctcttcagcctgccgcagctcacccgctacgactgcgaggtcaacgccccc
ctgcagggccgtcagtacctgctgcagggggaggagctgctgcgcgcactggaccacgtc
aactga
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