Hippoglossus hippoglossus (Atlantic halibut): 117755591
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Entry
117755591 CDS
T07778
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04137
Mitophagy - animal
hhip04140
Autophagy - animal
hhip04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117755591
04137 Mitophagy - animal
117755591
04148 Efferocytosis
117755591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117755591
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117755591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1
PAS
PAS_4
PAS_9
HLH
NOA36
Nop14
CDC45
PAT1
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
117755591
NCBI-ProteinID:
XP_034431395
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All DBs
Position
22:complement(12609991..12614727)
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AA seq
734 aa
AA seq
DB search
MSALVVHIVESEPVCRKSVADPLPVSRRVSSERRKEKSRDAARSRRGKESEVFYELAQQL
PLPHSVSSSLDKASIMRLTISYLRMRKLLTSDEPVAEEETELDIQLNSSYLKALDGFLIV
LSEDGDIIYLTENVNKCLGLAQFDLTGHSVFDFTHPCDQDELREMLIHRTGSKKTKESNT
ERSFFLRMKCTLTSRGRTVNVKSATWKVLHCSGHVRVYDTSTEQTSNGLKEPPVPYLVLI
CDPVPHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALD
SDHLTKTHHNLFAKGQVSTGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCLNFVLS
GIQEEKLILSLEQTEDVMLVKKEQKRQEAEEKVLVESSLPDMSPTLLKEEEEELEAEEEE
EEEEEAAVEEEEEEAAVEEEEEEEEEEAEKGPELDVIKLFTQASKARPLASLYDQLKEKP
EALTLLAPAAGDTIISLDFSCPDSEMQLLKDVPLYNDVMLPSSSEKLALPLSPLPPSEPL
NTRGGFKSEKSKAESYPPAPSTTITCHSSSEVRLSELQSFYIINYKCFAHLLICTETLMT
FDISSLQADSPMDFCFPMDSDMSSDFKLDLVERLFAIDTEPKTPFNTQAMEDLDLEMLAP
YIPMDDDFQLRSLTPEEPLTCGQVKSLKSSPVQVTQEVDSYPSSPFSAVGSSTASPAPLG
PVIVAHLATIIAKR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctctcgtggtgcacatagtggaatcagaaccagtttgtcggaagtctgtggct
gacccgctgcctgtctcccgcagagtgagctcggagcggaggaaggagaagtccagggat
gcggcgcgaagccggcgcgggaaggagtcggaggtgttctacgagctggcccagcagctg
cccctgccccacagcgtcagctccagcctggacaaggcctccatcatgaggctcaccatc
agctatctgcgcatgaggaagcttctcacctctgatgagccagtggcagaagaggaaaca
gagctggatatccagctaaacagctcctaccttaaggctctagatggattcctcattgtg
ctgtctgaagatggtgatatcatttatctcactgagaatgtcaacaaatgcctcgggctg
gcacagtttgacctgactggacacagcgtgttcgacttcacacatccctgtgaccaggac
gagctgcgggagatgctcatccacagaacaggctccaaaaagaccaaggagtcaaacaca
gagcgcagcttcttcctccgaatgaaatgcactctgacgagcaggggccgcactgtcaac
gtcaagtcagctacatggaaggttctccactgctcaggtcatgttcgtgtttatgacacc
agcactgaacagacttctaacggactcaaggagccacctgtcccctacctggttttgatc
tgtgaccccgtcccccacccctccaacatcgaggtccccctggacaccaagacctttctc
agccgccacacgatggacatgaagttcacgtattgtgatgagaggatcactgagctcatg
ggttatgatccagaggaccttttgaatcgttctgtgtacgagtactatcacgctctggac
tctgaccatctcaccaagactcaccataacttgtttgcaaagggccaggtcagcacagga
caataccggatgttagctaagagaggaggctttgtgtgggtggaaacccaagccactgtc
atctacaacaacaagaactcccaaccacagtgtgttgtctgtctcaactttgtgctcagt
ggtatccaggaggagaaactgatcttgtctctggagcagaccgaggatgtgatgcttgtg
aagaaggagcagaagcggcaggaggcggaagaaaaggttctagtggagagcagcctgcct
gacatgtcaccaaccctgctgaaggaggaggaagaagagctcgaggcggaggaggaggag
gaggaggaggaggaggcagcggtggaggaggaggaggaggaggcagcggtggaggaggag
gaggaggaggaggaggaggaagcggagaaaggcccagagctggatgtgatcaaactcttc
acccaggcgtccaaggcccggccactggcgagcctgtacgaccagctgaaggaaaagcct
gaggccctcaccctgctggccccggctgctggagacacaatcatctccctggactttagc
tgccctgattcagagatgcagctgcttaaggacgtccctctctacaacgatgtcatgctt
ccctcctcgagtgagaagctggctctgcctctctcccccctgccgcccagcgagcctctc
aacaccagaggaggattcaaaagtgagaaatctaaagctgagagctatcctccagctccg
tccactacaataacctgccacagctcctcagaggtcagactcagtgaactgcagtcattt
tacattataaactataaatgttttgcccatttattaatatgcactgagacgttaatgacc
tttgacatctcttctcttcaggctgacagtccaatggacttctgtttccccatggactca
gatatgagctcagacttcaaactcgacttggtggagaggctttttgccattgacacagag
cccaagacccccttcaacacccaggcgatggaagacttggatctggagatgttagcgccc
tacatccccatggatgatgacttccagctgcgcagtctgaccccagaagagcctctgacc
tgtggacaagtcaaatccctcaagagttctccagtccaagtcacacaggaagtggacagc
taccccagctcccccttcagcgcagtaggaagtagcacagcttccccggcaccacttggg
cctgtaatcgttgctcatctcgccaccatcatcgctaagaggtaa
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