Hippoglossus hippoglossus (Atlantic halibut): 117755595
Help
Entry
117755595 CDS
T07778
Symbol
rab11fip5a
Name
(RefSeq) rab11 family-interacting protein 1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117755595 (rab11fip5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117755595 (rab11fip5a)
Membrane trafficking [BR:
hhip04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117755595 (rab11fip5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
117755595
NCBI-ProteinID:
XP_034431402
LinkDB
All DBs
Position
22:complement(3521415..3544587)
Genome browser
AA seq
1390 aa
AA seq
DB search
MSSLTVEDEQTWVPTHVQVTVLRGRGLRGKGKHGTSDVYAIIQLGKEKYSTGVVEKTTEP
EWREECSFELQPGVLQGGGRSGYPAGGSELVLTVMHRALIGLDVFLGQAVVQLDEVFNQS
RWVKNQWYRLNSKTGKKEKERGDIQVSVQFTRNNLTASMYDLVMKDKGTSTFNKLKERMR
GKRRSSEEDSPSAIVPGGNGSLDRVRTRLPSDGGGEEDYEDDEGGEARRSKMRTFFLRGK
LRKSSDTRSSTSLGSESSESSRGGSLSPTAGISVVVSDLSNSPSSSNLTADNSPEHTEDT
SPKSSSLKCDSGDEAGEITIAVPQLTVCVNGSHAYKVQPLDPGSGKPVHSLGLGLLQKSL
PVSVSLQNLSPQASADPHKAPAGDGRRWSFDKPGEEEKAAIAAALEQSGPMQGDEEEEEE
RLGRAALSESQGKKQRRKGQSQSKDGSEGAPAATAEKHKGWFGSKDSHCKPSLVVSPKLD
PNNDPLPSSHPPSGPPVDLTALVSPLHHTNPFCRSQTSPPPLSPCNPFFSVLQHNPFYDD
LLTTPPPTPPLPPLPYLSSSRPPIAQLFPQASDHNHTVTHDNPATEDSVVGTDVATSDRR
AEVEKGLLPLASNALMSAGQLEPDSEWDDSFEAFAAGRLQSPEDLSTDCKTQQNTPSDHP
LENCNNKGTLLPITDRNTSENDALHHQPCREDPWDAQEATDKFAQFLETIPEQIHSESGN
TTFNPPPDLSKLDACTETNQANSTTNTNMHQTPCNTSSTQLISSSPDPASSGLGSSVEDE
VHSCLSSYDDKLSASSSEESEARNFESHIQRPDAAVSENPKPSESEDDITDRSNDWTVFD
VAQQTVIQQQDGDGGPDNSEAPQSPVISHQEPEITARETETEGAGTETLNISKVPELLPN
LSEVQLESNVSSQSDVFKNLIWDFSEEFNDSSGNNNTDVNILVTPDDEFSSKLPSLYVLT
SSPDLKQRLLDTSLGRQEASRSSPVSFGAFGETRPGLDFDSTLLHTQVSDQSSSSFLQSL
YVSTDSQDYQTCASHPSSSVSELDETPLSANSTLCGELSDIQTTADGALGLEESTSASTS
SNREINQTNRFEEYDDKTNFMIGDDFGLEVLPAEIKDSEESCGPKRLGEENQNAVFDDEF
SRYPQAQSAALHRSHSEGTLTPGFDELLLPSFGSDPGAIQESSSVQPDLALPSLTSLAPS
LTLSSSSLVLRSFPPLASALAGSPPSTAQAAVPEPEETQEQQQQQQAASQQNSPHPVRPL
TTALLAEEKRTEGRSVLATGLEKLKSTIHPGRSSQISETETDRRKSLTEGAGSYYHLTHS
ELVALLGQREADLRRQGAEFERQRVLLAKREVELRRLKPQVRDLEDYIDTLLVSIMEQKP
TLLQVRSKLK
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctaaccgtggaggacgagcagacatgggtaccgacgcacgtccaggtgacg
gtgctcaggggcaggggcttgcggggcaagggcaagcacggcaccagcgacgtgtacgcc
atcatccagctgggcaaggagaagtactcgaccggcgtggtggagaagaccaccgagccg
gagtggagggaggagtgctccttcgagctgcagcccggcgtgctgcagggcggcgggcgg
agcgggtacccggccgggggcagcgagctggtcctcaccgtcatgcaccgggcgctcatc
gggctggacgtgttcctgggccaggctgtggttcaactggatgaggtgttcaaccagagc
agatgggtgaaaaaccagtggtacagactcaactccaaaaccgggaagaaggagaaggaa
cgaggagacattcaagtcagcgtccagttcaccagaaacaacctgaccgccagcatgtac
gacctcgtcatgaaggacaaaggcacctccaccttcaataagctcaaagaacgcatgagg
gggaagaggagatccagtgaggaagactccccctcggccatcgtgccaggtggaaacggg
tccctggatcgggtgcggacccggctgccgagcgatggcggcggcgaggaggactacgag
gacgacgaggggggagaggcccggcggagcaagatgaggaccttcttcctcagagggaag
ctgaggaagtcgtcggacactcgctccagcacatctctcggctccgagagcagcgagtcg
tcgcggggcgggagcctcagtcccacagcgggcatcagtgtggtggtttctgacctctcc
aactcgcccagcagcagcaacctgacggcagacaactccccagagcacacggaagacacg
tcgcccaagtcgtcctcgctcaaatgtgactccggtgacgaggccggtgagatcaccata
gcagtgcctcagcttactgtgtgcgttaacggaagccatgcttacaaagtccagcccctg
gacccaggctcaggaaaacccgtccactctttaggcctgggactgttgcagaagtctttg
cccgtgtcggtgtcgctacagaacctcagcccgcaggcgtccgccgaccctcacaaagct
cccgcgggcgacgggcgccgctggtcctttgacaaacccggcgaggaggaaaaagcagcc
atagcggcggctttggagcaaagcgggcccatgcagggtgacgaggaagaagaggaggag
cgtttgggccgggcggctctgtcagaaagccaggggaagaagcagaggaggaaagggcag
agtcagtccaaggacgggtcggagggggcccccgctgccactgcggagaaacacaagggc
tggttcggatctaaggattcacactgcaaaccaagcctggtggtgtcacctaaactagac
cccaacaatgatcccctcccctctagtcaccccccctcgggtccccctgtcgatcttacc
gctctggtttctccgctgcatcacactaaccccttctgccgctcgcagacctcaccacct
cccctgtccccctgcaaccctttcttctctgtcctccagcacaaccctttctatgacgac
ttgctaaccactccgcccccaacacccccattgcctcctctgccctatctctccagctcc
cggccccccatagctcagctctttccgcaggcgagtgaccacaaccacactgtgacccac
gacaacccagccacagaggactccgtcgttggcaccgatgttgcaacgagtgaccggagg
gccgaagttgagaaaggtctccttcctcttgcgtccaacgctttaatgtccgctgggcag
ctggagccagattcagagtgggacgattcttttgaagcgtttgcagctggcaggctgcag
tctccagaggacctgagcacagattgcaaaacacagcagaacacgcccagtgaccatccg
ctggaaaactgcaataataaaggaactctactgcccataacggatcggaacactagtgaa
aatgacgcactacatcatcaaccctgcagagaagacccgtgggacgctcaagaagccact
gacaaatttgcacaattccttgaaacaatcccagaacagatacactctgaaagcggcaac
acaactttcaatcctcctcctgatttatcaaagcttgacgcttgcacggaaactaatcaa
gctaacagtaccactaacactaacatgcaccagaccccctgtaacacttcatccacacag
ctcatcagcagctccccggatcctgcttcatcaggtctcggcagctcggtcgaggacgag
gttcactcctgtctttcttcttatgacgataaactttctgcgtcctcctccgaggaatct
gaggcacggaactttgagagccacattcaacgtcctgacgccgctgtgtctgaaaaccca
aagccctcagaatctgaagatgacatcaccgacaggtcaaatgattggacggtgtttgat
gtcgcccagcagactgttattcagcagcaggatggggatggaggtcctgacaattcagag
gcaccacagtccccggtgatttcacatcaggagcctgagatcactgcaagagagacagaa
actgaaggtgcaggaaccgagacactaaacatttccaaggtcccggagttgttgccgaac
ctctctgaagtacaactagaatccaacgtctcttcacagtctgatgtgttcaaaaacctt
atttgggatttctctgaggagtttaatgatagttctggaaacaacaatacagatgtgaac
attcttgtgactccagatgacgaattctcctccaagctcccatcgttgtacgtcctgacc
tcctcccctgatctgaagcagcgtttgttggacaccagtttaggacgacaggaggcgagc
cggtctagtccggtgtcatttggggctttcggtgaaaccagacccggcctggacttcgac
agcacactgttgcacactcaggtgtctgatcagagctccagcagcttcctccaaagcctt
tatgtcagcaccgactcgcaggattaccagacttgtgcgtctcacccgtcctccagcgtc
tcggagctcgacgagacgccgctttctgcaaactcaacgctctgcggtgagctgagcgac
attcagacaactgctgacggtgctttgggcctagaagagtccaccagtgcgtccacgtca
tcgaacagagaaatcaaccaaaccaacagatttgaagaatacgatgacaagacaaatttc
atgataggggatgattttggtctcgaagttcttcctgcagaaattaaagactctgaggag
agctgcggtccaaagaggctcggtgaggaaaaccagaacgccgttttcgatgacgagttc
tcaagataccctcaggcccagtctgctgcgctacaccgctcccactccgagggaaccctg
acgcccggctttgacgaactcctcctgccctccttcgggagcgatcccggtgcgatacag
gagtcctcgtcggttcaaccagacctcgctctcccctctctgacctccttagctccctct
ctaactcttagtagctcctctctagtgctccgctccttccctccccttgccagcgctttg
gcggggtcaccacccagcacggcacaagctgctgtgccagagcccgaggagacgcaggag
cagcagcagcagcagcaggcagccagtcagcagaacagcccccacccagtgaggcccctg
accactgccttgctggctgaggagaagcggactgagggccggtcagtgctggccaccggc
ctggagaagctcaagtccaccatccacccagggaggagcagccagatcagcgagacggag
acggacaggaggaagtctctgacggagggggcgggctcgtactaccacctgacccacagc
gaactggtcgccctgctggggcagcgggaggcggatctgcggcggcagggggcggagttc
gagcgtcagcgggtcctgctggccaagcgggaggtggagctgaggaggctgaagccgcag
gtccgagatctggaggactacatcgacacgctgctggtgagcatcatggagcagaagccc
acgctcctgcaagtgcgctccaagctcaagtga
DBGET
integrated database retrieval system
