Hippoglossus hippoglossus (Atlantic halibut): 117755660
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Entry
117755660 CDS
T07778
Symbol
vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117755660 (vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117755660 (vti1b)
Membrane trafficking [BR:
hhip04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
117755660 (vti1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
117755660
NCBI-ProteinID:
XP_034431549
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Position
22:complement(4286470..4290279)
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AA seq
227 aa
AA seq
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MSSEEFEKLHEIFSSMFEELKLIPDRAAMSQGEERKRLVRTFDERNGEAEEVLQGMEEEL
RGAPSSYRNGMATKLRLYRRDLGKLQRDMKNSAPSFGSSSQPVGGSHHGIYSSENQQSTH
LQSQRTLLLQGTDSLNNASQSIERSQRIAAETEHIGTDIIEELGEQREQLDRTRSRLVTT
GENLSQSRKILRAMSRRLMTNKLLLSVIILMELAILGAVIYLKFFRK
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggaggagttcgagaagttgcacgaaatcttcagctcgatgttcgaggagctg
aagctgattccagaccgagctgcgatgagccagggagaggagaggaagaggttggtgaga
accttcgatgagagaaatggggaagctgaagaagtgttacaaggaatggaggaggagctg
cgcggcgccccgtcttcttatcgaaacggaatggctacgaagctgcgcctgtaccgccgg
gatctgggcaaactgcagagggacatgaagaactctgctcccagctttggctcctcgtcc
cagccagtgggaggaagtcatcacggcatctactcatcagagaatcagcagagtactcac
ctgcagtcccagagaaccctgctcctccagggcacagactctctgaacaacgctagtcag
agcattgaacgcagccaacgcatcgctgcagagacggagcacatcggtaccgacatcatc
gaggagctgggggagcagcgcgagcagctggaccgcaccaggagcagattggtgaccact
ggagagaacctcagtcaaagtcgaaagatccttcgtgccatgtctcggcggctgatgaca
aacaagttgctgttaagtgtgatcattctaatggagctggcgatcctgggcgctgtgatt
tacctgaagttcttccgaaaataa
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