Hippoglossus hippoglossus (Atlantic halibut): 117755695
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Entry
117755695 CDS
T07778
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04350
TGF-beta signaling pathway
hhip04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117755695 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117755695 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117755695 (neo1a)
Cell adhesion molecules [BR:
hhip04515
]
Immunoglobulin superfamily
DCC/UNC5 family
117755695 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
fn3_2
Interfer-bind
Tissue_fac
Ig_5
C2-set_2
Sp38
V-set_CD47
EphA2_TM
TMEM154
DUF4834
Motif
Other DBs
NCBI-GeneID:
117755695
NCBI-ProteinID:
XP_034431581
LinkDB
All DBs
Position
3:complement(5701458..5865370)
Genome browser
AA seq
1510 aa
AA seq
DB search
MAERGALWLLSLLCLTFLCTESAAAKHVDKGSAAQPFSPFWFTVEPQDTLAIRGNSAMLN
CTTHSDAATPTRIEWKKDGTFMSLVSDERRHILPDGILFFNHVVHSKHNKPDEGTYQCVA
TIDSLGSISSRTARLAVAGMPRFASQPAPSTVRLGDSQVMACEVNSDLVPFTRWEKDRQP
LELSTRLLLLPSGALVINNASEADAGLYRCLVENVGSSKTSDEAQLQVLPETEDERKPEF
LVQPAAVIKVVGNSVLLPCVVSGFPAPNVRWMLGDKLLQESEGRLELLAGGSLQIFNLTE
EDAGVYTCMADNSNATIEAQAQLTMQVPPQFIKRPANIYAHESMDIVFECEVSGSPAPTV
KWVKNGDAVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCLAENDAGNIQSSAQLVILDHDV
SLPSFPPPSLTPNTTDHVTPGSGGVAGPAGPTPTAPRDVVASLVSTRFIKLTWRQPAEPH
GDEITYSVFYSLEGTSRERVVNTSRPGEMQVTIQSLMPDTKYRFRVVAHNSNGPGESSAV
LKVATQAEVQVPGPAPNLQVVSNTPTSVSLSWDKPLTGNGELLTYKLYYIDKTFGTEQDV
DIDGQSYNMNGLKKNTEYSFRVVANNKHGPGVSTEDINVRTLSDVPSAPPQNLTLEVQNS
KSIMLRWQPPPLSGQNGEITGYKIRYRKGSRRSEAAEITGGTQLSKLIDGLERGTEYSFR
VSAVTVNGTGPATDWTATETFESDLDESRVPDQPSSLHVRPLINSIVVSWTPPENQDIVV
RGYTIGYGIGSPHAQTIKVDYKQRYYTIENLDASSHYVITLKAFNNVGEGIPVYESAITR
PQSDPTDPDVDLYELFPAPYTPVPDPSPMMPPVGVQSSVLSHDTIKVTWADNSLPKNQKI
TDNRFYTVRWKTNIPANTKVKMANTTSLNHMVTGLKPNTLYEFSVMVTKGRRTSTWSMTA
QGTTFETIPSSSPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDW
VIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEAVNFRTPKTESSDKMANDQA
SNLPPKQGPSGNQDPQDPGTSVGKSGVGSNSENHIVVIIIIISVGAFTIIVVVVGAFLCT
RRTTSHQKKKRAASKSANGSHKYKGNAKDLKPPDLWIHHERLELKPMDKSPDPNPVMTET
PIPRTSQDITPADSGLENNPHLQQRRNSYRGHESEESMSALAGRRGMRPKMMMPFDAQPP
QPVISAHPIHSLDNHHHHYHMGSLASPTRSYLYHQGSGHSRPHACASPISHLDRVDSAES
VRNTPSTEPLPPAAASSQASCPSEIMADPEGSYHGSSTTEEEPSYSSNLPPHRSAHPHAH
AHPLKSFAVPAIPATSYPSYESPALPSTPLLAQSGPPTHPHVVKTASIGTLGRTRTPMVV
IVPNAPDVPETSKMLEDVDSVLASLPPCPSPAPRSNPVPLPQNYEPDELTEEMAHLEGLM
KDLNAITTAP
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagctctgtggctcctctctctcctctgtctcacctttctctgcacg
gagagcgccgcggcgaagcatgtcgacaaaggttcagcagcgcagcccttctcccccttc
tggttcacagtggagccccaggacacgctggccattcggggcaactcggcgatgctcaac
tgcacgacccacagcgacgcggccacgcccacacgcatcgaatggaagaaagacggcacc
ttcatgagcctggtatcggacgagaggcggcacatcctccctgacggcatcctgttcttc
aaccacgtggtccactccaagcacaacaagcccgatgagggaacctaccagtgcgtcgcc
accatcgacagcctggggtccatctccagccgcacggcgcgcctcgctgtagcagggatg
cccaggttcgccagccagccagcgccgtccactgtgcgtctgggggacagtcaggtgatg
gcgtgcgaggtcaactccgatctggtgcccttcactcggtgggagaaagaccgccagccg
ctggagctgagcacccggttgctcctgctgccgagcggagccctcgtgatcaacaacgcc
tcggaggccgacgctggcctctaccgctgtctggtggaaaacgtggggtcgtccaagacc
agcgacgaggcccagctccaggttctaccagaaactgaagacgagcggaagccggagttc
ctggtgcagcctgcggctgtgatcaaggtggtgggcaacagcgtgctgctgccctgcgtg
gtctctggtttccctgcgcccaacgtccgctggatgcttggagacaagctgctgcaagaa
agcgagggtcgcctggagctcttggcgggaggcagtctccagatcttcaatctcacggag
gaggatgccggcgtctacacctgcatggcggacaattctaacgccaccatcgaagcccag
gcccaactcacaatgcaagttcctccccagttcatcaagcggccggccaacatttatgcc
cacgagtccatggacatcgtgtttgagtgcgaggtctcggggtcgccagctcccaccgtc
aaatgggtgaagaacggagacgctgtcatccccagtgactactttaaaatagtgaaggag
cacaacctgcaggttctgggtctggtcaagtcggatgagggcttttaccagtgcctcgca
gaaaacgatgccggcaacatccagtccagcgcccagctcgtcatcctggaccacgatgta
tccctgccctcttttcctcccccttcactgactcctaacactactgaccatgtaacgcca
ggctccggaggcgtagccggtccagcagggcccactcccaccgcccctcgggacgtcgtg
gcctcgctggtctccacccgcttcatcaagctgacctggcgccagccggcagagccgcac
ggagacgagataacctactcggttttctacagcctggaaggcactagcagggagcgagtg
gtgaacaccagccgtccgggggagatgcaggtcaccatccagagcctcatgccagacacc
aaatatcgcttcagggtcgtggcgcacaacagcaacggcccgggggagagctctgccgtg
ctcaaagtggccacccaggctgaagtccaagtccccggccctgctcccaacctgcaggtg
gtgtcgaacacgccgacctccgtctccctgagctgggacaaacctctcaccggcaacggc
gagctcctcacctacaagttgtactacatcgacaaaaccttcggcactgaacaggacgtt
gacatcgatggtcagtcctacaacatgaacgggctgaagaagaacacggagtacagcttc
cgcgtggtcgctaacaacaagcacggcccaggcgtctccacggaggacatcaacgttcga
accctgtctgacgttccaagcgctcctcctcaaaacctcactctggaggtgcagaactca
aagagcatcatgcttcgctggcagcccccgcccctcagcggccagaacggggagatcaca
ggctacaagatccgataccgcaaagggtcgcggaggagcgaggccgccgagatcaccgga
ggcacccagctcagcaagctcattgatggtctggagcgcgggacggagtactcgttcagg
gtgtcggccgtgacggtgaacggcacggggccggccaccgactggacggcgacggagacg
tttgagagcgacctggatgaatcccgagtcccggaccagcccagttccctccacgtgcgg
ccgctgatcaacagtatcgtggtgagctggacgccgccggagaaccaggacatcgtggtt
cgaggttacaccatcggctacggcatcggcagtccccacgctcagaccatcaaagtggat
tacaagcagcgctactacaccatcgagaacctcgacgccagctcccactatgtgatcaca
ctcaaggccttcaacaatgtgggcgaggggattcctgtgtacgagagcgccatcaccagg
ccacagtcagaccccactgaccccgatgttgacctgtatgaactcttccctgctccatac
accccagtaccagacccctcccccatgatgccgcccgtgggtgttcagtcctcggtgctg
agccacgacaccatcaaggtgacctgggccgacaactcgctgcccaaaaaccaaaagatc
acagacaaccgcttctacacggtgcgatggaagaccaacatccctgccaacaccaaagtg
aagatggccaacaccaccagcctgaaccacatggtgacgggtctgaagcccaacacgctg
tacgagttctccgtcatggtgaccaagggccgccgcaccagcacgtggagcatgactgcg
cagggcacgaccttcgagaccatccccagctcgtctccgaaagacgtgaccgtggtgagc
aaagagaacaaacctcgcaccatcatcgtcaactggcagccgccctccgaggccaacggg
aagatcaccggctacatcatctactacagcacggatgtgaatgctgaggtccacgactgg
gttatcgagccggtggtgggaaaccgcctgacgcaccagatccaggagctgacgctggac
accacctactacttcaagatccaggcccgtaactccaagggcatgggccccatgtccgag
gccgtcaacttccgcactccaaagactgagtcctctgacaaaatggctaatgaccaagcc
tccaatcttccaccgaagcagggaccttcaggcaaccaggacccacaagaccctgggacg
tcagttggtaaatcaggggtgggaagcaacagtgagaatcacatcgtggtcatcatcatc
atcatctcggtgggagccttcaccatcatagtggtggtggtcggcgccttcctgtgcaca
cggcgcaccacgtcccaccagaaaaaaaagcgagccgcctcaaagtccgcaaacggctcc
cacaagtacaagggaaacgccaaagacctgaagccgcccgacctctggattcaccacgag
aggctggagctcaaacccatggacaagtcgccagaccccaacccagtcatgaccgagacg
cccatcccccgcacctcgcaggacatcacaccggctgacagcggcctggagaacaacccc
cacctgcagcagaggcgcaactcctaccgcggccacgagtcagaggagagcatgtctgca
ctagcaggtcgacgagggatgaggcctaaaatgatgatgccttttgatgcacagccgcct
cagcctgtgattagtgctcaccccatccattccctcgataaccatcaccaccattatcac
atgggcagcctggcgtcgccgacacggagctacctctaccaccagggtagcggccactca
cgtccgcatgcctgcgcctcccccatctcccatctagacagggtggactctgcagagtcg
gtcaggaacacccccagtacggagcccctccctccagccgccgcctcctcccaggcctcc
tgcccctcggagatcatggctgaccccgagggcagctaccacggctcctccaccaccgag
gaggagcccagctactccagcaacctgcccccgcaccgctcggcccacccgcacgcccac
gcccacccgctcaagagcttcgctgtcccagcgatcccagccaccagctacccgtcgtac
gagtcgcccgccctgcccagcacgcccctgctcgctcagtccgggccgcccactcacccc
cacgttgtgaaaacagcctccattggaacactaggaaggacacgaacaccgatggtggtc
atcgtgcccaatgcccccgacgtcccagagaccagcaagatgttggaagatgtagacagc
gtgcttgcctccctccccccctgcccctctcccgcccctcgcagtaaccctgttcctctc
cctcagaactacgagcccgacgagctgaccgaggagatggcccacctcgagggcctgatg
aaggacctgaacgccatcaccacagcgccatga
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