KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117755704
Entry
117755704         CDS       T07778                                 
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03082  ATP-dependent chromatin remodeling
hhip03083  Polycomb repressive complex
hhip04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117755704
   03083 Polycomb repressive complex
    117755704
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    117755704
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hhip03036]
    117755704
Chromosome and associated proteins [BR:hhip03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     117755704
  Histone modification proteins
   HAT complexes
    HATB complex
     117755704
   HDAC complexes
    Sin3A-HDAC complex
     117755704
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     117755704
    PRC2.2
     117755704
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     117755704
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    117755704
  Chromatin remodeling factors
   NuRD complex
    117755704
   NuRF complex
    117755704
   NuRF complex (fruit fly)
    117755704
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF12 eIF2A ANAPC4_WD40 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 117755704
NCBI-ProteinID: XP_034431607
LinkDB
Position
22:15727837..15732700
AA seq 427 aa
MADKEAVFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGESIEFGGFGSVSGKIEI
EIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQ
KEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHL
LHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKT
VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPE
DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGA
ADSEVQA
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcagataaagaggctgtgtttgacgatgctgtggaggaaagggtgatcaatgaggag
tacaagatctggaagaagaacacccctttcctctatgacctggtcatgactcacgccctg
gagtggcccagcctcaccgcccagtggctgccagatgtcaccaggccagagggaaaagac
tacagcgtgcacaggctggttctgggcacacacacctctgatgagcagaaccaccttgtg
atcgccagcgttcagctcccgaacgacgatgctcagttcgacgcctcacactatgacagc
gagaaaggagaaagcatagagtttggaggctttggatctgtaagtggcaagatagagatt
gagatcaagataaatcacgagggagaggtgaacagagctcgctacatgcctcagaatccc
tgcatcattgccaccaagaccccgacaagtgatgtgctggtctttgattacacaaaacac
ccctccaagcccgacccctcaggagagtgcactccagatctgcgcctcagaggccaccag
aaagaaggctacggcctctcctggaacccaaacctcagtggttgtctacttagtgcttct
gatgaccatactatctgcctgtgggacatcagcaccgtgcccaaggaggggaagattgtg
gatgctaagaccatcttcacaggccacactgctgtggtggaagatgtctcctggcatttg
ctccacgagtcactctttggatctgttgcagatgaccagaaactcatgatctgggatacg
cggtctaacaacacatccaagcccagccatgcggtggacgcccacactgctgaggtcaac
tgcctctccttcaatccttacagtgagttcatcctggccactggctctgcagataagacc
gtggctctctgggacctgaggaacctgaagctgaagctgcactcgtttgagtctcataaa
gacgagatcttccaggtgcagtggtctcctcataacgaaaccatcctggcctccagcggc
acagacagaaggctcaacgtctgggacctcagtaagatcggagaggagcagtctccagag
gatgctgaggacggccctcctgagctgctgttcatacatggaggacacacagctaagatc
tcagacttctcttggaaccccaatgagccgtgggtcatctgttctgtatcggaggacaac
atcatgcaagtctggcagatggctgaaaacatctacaatgacgaggacccagagggcgct
gcagactcagaggtccaggcatga

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