Hippoglossus hippoglossus (Atlantic halibut): 117755835
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Entry
117755835 CDS
T07778
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117755835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117755835
03021 Transcription machinery [BR:
hhip03021
]
117755835
03036 Chromosome and associated proteins [BR:
hhip03036
]
117755835
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Helix-turn-helix
ARID
117755835
Transcription machinery [BR:
hhip03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117755835
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117755835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
117755835
NCBI-ProteinID:
XP_034431847
LinkDB
All DBs
Position
22:complement(15916200..16092285)
Genome browser
AA seq
2359 aa
AA seq
DB search
MAAQVASAPTRTNNKNKKLSSGLGPELNSGKSGGGGGGGTVQRSGPMLGAGDGTLNNVDH
RRRNELNMVHSTSTTHGAPDGHDKDGNNLTSASASTNSTTSSMEAGLIANHKLKCVGSGD
PPQSQPLPQQQPPPQFGQFAPHQQRQIQSNNTANNNGQGPRGDRGMDHQHHGGKENLLGG
QGEPQQQQQQHMPGKGEGELTCKPAERMTSTRYDHSNLGPTSNNSEFNNNYYTPRPCYEQ
HGGQQQQSSGMGVTHSSAHNSMENSHEAGFHNNQYNQYPGYRASYGGGAYGMMGPSGCRQ
PGNMMMGSNSSTSHGKSPLGAGSGGFQRFPGQTQQQQQQPQQQPQQQQHPSGATPTLNQL
LTSPSPMMRGYGAAYQDYSGPTAQQQGAMGLGKDVGPQYGPASAHGWGGQQRNHPHSLSP
GNGGQGLGRTQVSSMDFMAMKRSQLYGMANNPYSTPQQPGGGPYPPSQPYTSPPPHRYPM
GMQGRGQMMGGMQYPQQQQVAPYGQQVMAGYGQPQPQPQPQPQPQQQQQPGQQQQGTPPY
FSSPQQTPPGPNQSPYLQPRPPPQQEAQQESYNTRGPAPGNSGKANNEDGVSQDRPSSLP
DLSGSIDDLPTGTEAGLVSTVSAGGSSSSSSSSSQGEQGGASNQGQSPFSPHASPHLPSQ
RSGPSPSPVGSPAGSTQSQHSRSGSGPISPASGPSANNAAPGSNVALQSSGNGPDGAHPP
ITRSPMAQERGFMSNMQRNQAGSQFASPQSGPSMSPHPSPGGPLYPGMVPYSQSGPTGHY
GPQGSQYGHQGNYPRPSNYSGTASASYSGPGPNSLGMNATSPMHGQGPGQPIPVGRSHGP
SNQNRVYPPMAPSSPSMPQPAGPGMGPPSLGSSNRKVQDAGAAVVLGSANSTHNRRPSYV
RSPAQMQLTPPTSNHWPAPHSDSTRPQPSPPLRSHHPCILSSSHSQHHRQGSYPGPGISQ
ASTMATTVPYSQPASNNSSAMGNAQGPAYMPPSGALAMSGDGMMSPDGKPKVDVKDDTGP
VNEPPKPKLQDGYSNNNSSSSSSQQCVSQPATPGGALPVPSPLSPSPASLSSYHGDDSDS
ISSPPWPLKTPSSPKANPNASSLSGERITRLFELGVEPERRGWVERYLTFMEERGTAVSQ
LPTVGKKPLDLWKLYLAVREIGGLAMVNKNKKWRELSTTLNVGTSSSSASALKKQYIQYL
FAYECKMERGEEPPADSSSSSGSGSGSSSMAGGENRKQVKIQPPSPANSGGSLQGPQTPQ
SSGSSSTAEAAGDLKPPTPATTPLGQVTPLPPNRSSVSVQDPFSEVSDPAFVKRAASLPP
SAPYQQGLSMPDMMMRMQYDTKDPFAGMRKMAGADPYIPGQMPGGGLQDMYGRPPSSLSM
SQRSQYPYGPGYDRRPDHVMGMEGSMGPPGSQNNLGPSNSEGSMYSASRYPSQQRHDGYG
QQYPSMPYGMHPSGMYPQQQQGYKRPMDGMYGPPPKRHESDMYAMQYGNQQPDMYNHYSG
GYSGPEHRGLQGQFPYPYPRDRIGPSGQSQHSLMGGGPTPNHAADGPNMWPSRTDLGYPY
PNRQGPPSQMPPYGSIGRDDMDGRPGQEQWHRQSPYLSSAGGMPPLSRQPSSYSNSPSMA
NHLPRAPSPGAFQRSLDSRMSPSKMQFMSPMKMPKPGMAMMGSQGGGSMGQFPPNLRRDL
NYPPGSVEASMPILKPRRKLTSKETGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDS
TVASFILSQLPGFLELIVEHFRRCLIEIFGILEEFEVGTVAHKNFLDPPPNQKEEEPTPE
QETDSAVQPESESAPAVETQVEQTGGVTEEAPTVAAEPESAVVNGEKEECEASRKKEDKN
KEDREKEGKEKEEGEKGAESKKESTEQPVTELQPKPQQASKYDKLPIKVVHKEDLIEDMT
ERLGYITEFTSGLLHWQAGGGDSTAHIQTHFEPRIAPPARADEKTRKEDKQEQKMEDGKK
QPLKHITATIDDVLCARVDALSYAHPARSLPSYPFRVHPDGEQDHITLLEDEPRCLDEAP
LSTISAWQDSLSKRCLCVSNIVRSLSFIPGNDLDMSRHPALVLLLGRLLLLQHQHPERMR
SPPSYQRDEQREQGLSSSKEEWWWECLSLLRENALVTLANISGHLDLSTYSDTICLPILD
GLLHWMVCPSAEAQDPFPSAAPHSLLTPQRLVLECLCKLSIQDGNVDLLLATPPFSRQEK
LFTVLLRYVGQRKAQVYREMAVAVLSHLAQGDPTAARAIAMQKGSVGNFVGFLEDGVSMA
QYQQNPHSLLHMGHPPLDPPSINMMCRAAKGLLAMAKVEENKTEFALYESRLLDISISSV
LSAGVVTIICQVLFHLGKL
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcggctccgaccagaactaataacaaaaataagaaattatcc
agcggtctgggtccggagctcaattcggggaaatccggaggaggtggaggaggagggacc
gtgcagcgaagtggaccgatgttgggagccggagatgggactctgaataatgtagaccat
cgccgccgtaacgagctcaacatggtccattcaacttccacgactcacggcgcgccggac
ggccacgacaaggatgggaataacctcacgtccgcgtcggcgtcgactaattcaaccact
tcctcgatggaagcgggtttgatcgcgaaccacaagctgaaatgtgtggggagcggagat
ccccctcagtcccagccgctgcctcagcagcagccaccgccgcaatttggccaatttgcg
ccacatcagcagcgacagatccaaagtaacaacaccgccaataacaacggccaggggccc
cgtggagaccggggcatggatcaccagcaccacggtggcaaagagaacctgttggggggg
cagggggagccacagcagcagcagcagcagcacatgccaggtaaaggtgagggggagctc
acctgtaaacccgcggagaggatgacgagtaccaggtacgatcattctaacttagggcca
actagtaacaactccgagtttaacaacaactattacactccacggccctgttacgagcaa
catggcggacagcagcaacaaagcagtgggatgggggtaacgcactcctcggcacataac
agcatggagaattcccacgaagcagggttccacaacaaccagtacaaccagtacccgggg
taccgggcgagctacggcggcggggcctacgggatgatggggccctctgggtgccggcaa
cctgggaacatgatgatgggcagcaactcctcaacaagccacggcaagtctcccctggga
gcgggttcgggcggcttccagaggttcccgggacaaacccagcagcagcagcagcagccg
cagcagcagccgcagcagcagcagcatccctcaggggccaccccgaccctcaaccagctg
ctcacgtcccccagcccgatgatgcggggttatggcgctgcctatcaagactacagtggc
cccacggcgcagcagcagggcgctatgggcctggggaaagacgtggggccccagtacgga
cccgcttcggctcacggctggggaggacagcaaaggaaccaccctcactctctgagcccg
ggtaacggaggacaaggcctcggcaggacgcaggtgtcctccatggacttcatggctatg
aagcgatcgcagctgtacggcatggccaacaatccttactccactccacagcagccaggg
ggcggaccttacccccctagccagccgtacacgtcacctcctccgcaccgatatccgatg
ggcatgcaggggaggggtcagatgatgggtggcatgcagtaccctcaacagcagcaggtg
gcgccgtacggccagcaggtgatggcgggctacggccagccacagccacagccacagccg
cagccgcagccgcagcagcagcagcagccagggcagcagcagcagggaacccccccatac
ttcagctcccctcagcagaccccccctggcccaaaccaaagcccctacctgcagcctcga
ccaccaccacaacaggaggcccagcaggagagctacaacacccggggtcctgctccaggg
aattctgggaaggccaacaatgaggatggtgtctcccaggaccgcccctccagtctgccg
gatctgtccggctcgattgatgacctccccacagggacagaggctggtctggtctcgacc
gtcagcgccggtgggtcgtcctccagcagcagcagcagtagccagggggagcagggaggc
gccagtaaccagggacagtcccccttctccccgcacgcctccccacatctccccagccag
aggagcggcccctctccctcccctgttggctcgccggcgggctccactcagtcccagcac
tctcgctctggctctggacccatctctcctgccagcggaccctctgccaacaacgccgca
ccaggttccaacgtggccctgcagagctctggaaacggaccagatggagcccacccacca
atcacccgctcacctatggctcaggagagaggatttatgtccaacatgcagaggaaccag
gccggctcccagtttgcttctcctcagtctggaccctctatgtccccgcacccttcacct
gggggcccattgtatcctggaatggttccctactcccagagcggccccacaggccattat
ggacctcaaggatcacagtatggacatcaaggtaactacccccgtccctctaactacagc
gggacggccagtgccagctacagcggccccggccccaacagcctgggtatgaatgctacc
agccctatgcacggccagggtcccggccagcccatacctgtgggacgtagccatggcccg
agcaaccagaatagggtttatccgccaatggctcccagctctcccagcatgcctcagcca
gctgggccagggatgggtcctccgtctttgggtagctctaaccgcaaggttcaggatgca
ggagccgctgtggtgctgggatctgccaactcaacacacaacaggcggccctcatatgta
aggtccccagcacagatgcagctgaccccacccacctccaaccactggcctgcaccccat
tctgactccacccgtccacaaccttcacctccactcagatctcatcacccatgcatcctg
tcatcctcacactcacagcaccataggcagggcagctatccaggccccggcatcagccaa
gcaagcactatggccaccaccgtcccctacagccagccagcaagcaacaacagctcagct
atgggtaacgcacaaggtccagcctacatgccgccttcaggagccttggcgatgtcaggg
gacggaatgatgagcccggatgggaaacccaaagtggacgtgaaagatgacacaggcccc
gtcaacgagcctcccaaaccaaagctacaggacggctacagcaacaacaacagcagcagc
agcagctcccagcagtgtgtgtcccagccagcgacaccaggcggcgccttgcccgtgccc
tcccccctctcccccagcccggccagcttgtcctcctatcacggggacgacagcgacagc
atcagcagcccaccatggccactcaagaccccttctagccccaaagccaaccctaacgcc
tcctccctcagtggggagcgaatcacgcgcctttttgagctgggtgtggagccagagagg
cggggctgggtggaacgatacctgaccttcatggaggagaggggcacggccgtctcccag
ctgcccactgtgggcaagaagccgctggacctgtggaagctctacttggctgtccgtgag
ataggaggcctcgccatggtaaacaagaacaagaagtggcgtgagctgtccaccacgctg
aacgttggcacatcgagcagctccgccagcgccctcaagaagcagtacatccagtatctg
ttcgcctacgagtgtaagatggagaggggagaggagccgccggcggacagcagcagcagc
agcggcagcggcagcggcagcagcagcatggctggaggggaaaacaggaagcaggtcaag
atccagccaccgtcacctgcaaactcaggcggctccctccaaggcccacagacaccacag
tcgtctggcagcagctccacagcagaggcagcaggggacctgaaaccccccacacctgcg
accacccctctggggcaggtcacaccgctgccccccaacaggagtagtgtgagcgtacag
gaccccttctcggaggtgagcgacccggccttcgtaaagcgtgctgcctccctgcccccc
tcagctccctaccagcagggcctcagcatgcctgacatgatgatgaggatgcagtacgac
accaaggacccctttgccgggatgaggaagatggctggagctgatccctacataccaggt
cagatgcctggtggtggtctgcaggacatgtatggccgacccccatcatctttgagcatg
agccaaagatcacagtatccgtacgggccaggctacgacaggagaccagaccatgtgatg
gggatggaggggagcatgggtcctcctgggagtcagaacaacctggggccgtccaacagc
gagggcagcatgtactctgccagcagatacccttcacagcagagacacgacggctacggt
cagcagtatcccagcatgccatatgggatgcatccatctgggatgtacccacaacagcag
cagggctacaaacggcccatggacggtatgtacggccccccacccaagagacatgagagc
gacatgtatgccatgcagtatggtaaccagcagccggatatgtacaaccactacagtggt
ggatactcaggccctgaacacagaggcttacagggacagttcccctacccttacccccgc
gaccgcataggcccctcaggacagagccagcacagtttgatgggcggggggcccactcct
aaccacgctgctgatgggcccaacatgtggccatccaggacagacctgggctatccctac
cccaaccgacaggggccgccatctcaaatgccaccgtacggctccattggtagagatgac
atggacgggcggcctgggcaggagcagtggcaccgtcagtctccctacttgtcgtcagca
ggtggcatgccgcccctgtcccgccagccatcgtcttattccaactccccatccatggcc
aaccacctgcccagagcacccagcccaggggccttccagcgctccctggactctcggatg
tcacccagcaaaatgcagttcatgtcgcccatgaagatgcctaagcctgggatggccatg
atgggctcacagggcggtggatccatgggtcagtttcctcccaacctgaggagggacctc
aactacccaccaggatcagtggaggcctccatgcccatcctcaagccccgtcgcaagctc
acctccaaggagactggtacgcctgaggcctggcgcgtcatgatgtctctgaagtctggg
ctgctggcagagagcacatgggctctagacaccatcaacatcctgctgtatgacgacagc
actgtggcctccttcatcctctctcagttgcctggattcctcgagctcatcgtggagcac
ttccgccgctgcctgatcgaaatctttgggatcctggaagagtttgaggtgggaaccgta
gctcataaaaactttttggatcctcctcctaaccagaaggaagaagaacccacccctgag
caggaaacggactctgctgttcagcctgagtcagagtcagccccggcagtggagacgcag
gtggagcaaacgggaggcgtcacagaggaagctccaaccgttgctgcagagccagagtct
gctgtggtgaacggtgaaaaggaggagtgtgaggcgagcagaaagaaggaggacaagaac
aaggaagacagagagaaagaggggaaggaaaaagaagagggtgaaaaaggagcagagagt
aaaaaggagtctacggagcagcctgtcactgagttacaacctaaacctcaacaagccagc
aaatacgataagctccccatcaaggtcgtccacaaagaggacctgattgaagacatgaca
gagcgcttaggttacatcactgagttcaccagtgggctgctccactggcaggccggtggt
ggcgactccaccgcacacattcagacacactttgaaccccggattgctccacctgccaga
gcggatgagaaaacaagaaaagaggacaagcaggaacaaaagatggaggacgggaagaaa
caaccactgaaacacatcaccgctaccattgatgatgttttgtgtgctcgtgttgacgcc
ctctcttacgcccaccctgcacgctccttgccatcctaccccttccgggtgcacccggac
ggggagcaggaccacatcaccctgcttgaggatgagcctcgctgcctggacgaggctccg
ctctccacaatatccgcctggcaggactcgctgtccaagcggtgcctctgcgtctccaac
atcgtcaggagcctgtccttcatccctggcaacgacttggacatgtcccgccaccctgca
ctggttcttctcctgggcaggctgctcctgctgcaacaccagcacccggagaggatgagg
tcgccccctagctaccagagagacgaacagcgcgagcaggggctgtcgagtagcaaagaa
gagtggtggtgggagtgtctgagtctgctcagggagaacgccctggtcacactggccaac
atctctggacatctggacctctccacctactcagacaccatctgcctccccatcctggac
ggcctcctccactggatggtgtgcccctccgctgaagcccaggaccccttcccgtcagca
gcgccccactccctgctcacccctcaaaggttggtgctggagtgcctctgcaagctgagt
atccaggatggcaacgtcgacctcctgctagctacgccgcccttcagccgacaggagaaa
ctgttcactgtccttctccgttacgtgggacaaaggaaggcccaggtgtacagggaaatg
gcggtggccgtcctctcccacctggcacaaggagaccccacagcagcacgtgccatagcc
atgcagaagggcagtgtgggtaattttgttggtttcttggaggatggcgttagcatggcg
cagtaccagcagaaccctcacagcttactgcacatggggcatccccctttggacccgccg
agcataaacatgatgtgcagagcagccaaaggcctcttggccatggctaaagtggaggaa
aacaaaacggagtttgcgctgtacgagagccgattattagacatctccatttcctctgtg
ctcagcgctggagtggtgaccattatttgccaagttctctttcacttggggaaattatga
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integrated database retrieval system
