Hippoglossus hippoglossus (Atlantic halibut): 117755891
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Entry
117755891 CDS
T07778
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hhip04990
]
117755891 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
hhip04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117755891 (lrfn5a)
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GFIT
Motif
Pfam:
LRR_8
LRR_5
Ig_3
I-set
LRR_4
LRR_1
ig
LRR_9
Ig_2
C2-set_2
fn3
Ig_DSCAM-DSCAML_C
C2-set_3
Motif
Other DBs
NCBI-GeneID:
117755891
NCBI-ProteinID:
XP_034431947
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Position
22:complement(19855868..19966768)
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AA seq
881 aa
AA seq
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MERLLLCVMLAVAMAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNVDRHTVELRLA
DNFVTSVKRKDFANMTRLVDLTLSRNTISFITPHAFADLENLRALHLNSNRLTRIGNDTF
SGMSKLHHLILNNNQLMVIHQGAFNDLLALEELDLSYNNLDSIPWEAIQRMTSLHTLSLD
HNMLDYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLHDQVLATSGFMTSTSFA
LSFGGNPLHCNCELLWLRRLNREDDLETCASPQHLAGRYFWSVPEEEFLCEPPLITRFSH
EMRVLEGQRVALRCKARGDPEPAIHWISPEGKLVSNSSRTLVYSNGTLDIIISTVKDTGS
FTCISSNPAGEAHQTVDLVIIKLPHISNNTNNIQEPDPGSSDISTSSRGGANGSNVTGDV
KGGVDKRVVTAEATSSTALIKFNFQRNIPGIRMFQIQYNGSQDDSLVYRMIPPSSKNFLV
NNLAAGTQYDLCVLAIYDDIITSLTATRVVGCVQFSTETEYMRCHFMQSQFLGGTMIIII
GGIIVASVLVFIIILMIRYKVCNPGEGGKGVSMSMTNVHSQTNGQQSQGCTVTPSVSKHG
SIGLDDLSGGTKKRSGAAGEGVGGKDTVTQLSDSSLPDCSTATSVLSQPWAARSPTAGVE
EREKAGEDRAQASALTPTGTTGSLPKPKRKPAPSKPVSVCSNTSAVPENLASPRPASSSS
SSTACSVLLPPSLGLENLNTNRNNSTSLNQTPPPFAPTPFSSSLNTPSPVPSIRFRETPI
LRRAPRASSTTTTTSSSAKYQTLPVEEGGRSRARRRNSLSEGGSKTRSNPNSHQGGAAPK
LGRIVRNKRSQSMSGMLLLKDGDGDSDKGRCDSDWILESTV
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctgttgctgtgtgtgatgctggcggttgccatggcggtgcgggcacagatc
tgcccaaagcgctgcgtgtgtcagatcctgtcgcccaacctggcaaccctgtgtgccaag
aaaggcctcctgtttgtaccgcccaacgttgataggcacacagtggagctccggctggct
gacaactttgtcaccagtgtgaagaggaaagactttgcaaacatgacacgactggtcgac
ctcacattatccagaaacaccatctccttcatcacacctcatgcctttgctgatctggaa
aacctcagagccctacacctcaacagtaaccgcctgacgaggataggcaacgacacgttc
agcgggatgtcgaagctccaccacctgattctgaacaacaaccagctgatggtgatccac
cagggagcgttcaacgacctgctggcgctggaagaactggacctgagttacaataatctg
gactctattccttgggaagccatccagagaatgacgagcctccacacgctgagtttagac
cacaacatgttggactatattcctgagggaaccttctcgctgctccagaaactcaaccgg
ctggacgtcacctcaaacaaactgcaaaagcttccaccggaccctcttttccaacgagca
caggttttacacgaccaggtcctggccacgtcggggttcatgacgtccacttctttcgcg
ctgtcattcggtgggaaccctctccactgcaactgtgagttactgtggctgaggaggttg
aacagggaggacgacctggagacgtgcgcctcaccgcagcacctcgctggtcgatacttc
tggtccgtccccgaggaggagttcctgtgtgagccccccctcatcaccagattctcccat
gagatgagggtgctcgaagggcagcgagtcgcactaaggtgtaaggcaagaggcgatccg
gagccagccatccactggatctctccagagggaaagctggtgtccaactcctccagaacg
ttggtgtactccaacgggaccctggacatcatcatcagtactgtgaaagacacgggctcc
ttcacctgcatctcctctaaccccgccggtgaggcccaccaaacggtcgacctggtcatt
atcaaactcccgcatatctccaacaacaccaacaacatccaggaacctgacccaggatct
tcagacatttccacgtcgagccggggcggggccaacgggagcaacgtgacgggcgacgtg
aagggcggggtggacaagagggtggtgacggccgaggccacgtcgtcgacagcgctgatt
aagttcaacttccagaggaatattccgggcatcaggatgttccagatacagtacaatgga
agccaggacgactcgctggtgtacagaatgatccccccatcgagcaagaacttcctggtc
aacaacctggcagcagggacccagtacgacctctgcgtgctggccatctacgatgacatc
atcacctccctgacggcaacacgagtggtcggctgtgtgcagttcagcactgagacggag
tacatgaggtgtcatttcatgcagtcgcagttcctcggcgggaccatgatcatcatcatc
ggagggataatagtggcctcggtgctcgttttcatcatcatcctgatgatacggtacaag
gtgtgtaaccctggcgagggtggaaaaggtgtttctatgtctatgaccaacgtccactca
cagaccaacgggcagcagtcgcagggatgcactgtgactcccagcgtctctaaacacggc
tcaatcggattagacgacctctctggaggcacaaagaaaaggagcggagcagcaggagaa
ggagtcggaggcaaagatacagtgactcagttgtccgactcctccctgcctgactgctcc
acggccacgtcagttctcagccagccttgggcggccagaagcccgactgcaggagttgag
gaacgggagaaagcaggtgaagatcgagctcaagctagcgccttgacgccaaccggcacc
actggttctctgcccaagccaaagcggaagcccgctccgagtaagccggtctcggtttgc
tcgaatacctcggctgtccctgaaaatcttgcctcccctcgacctgcctcctcctcctcc
tcctccactgcttgctctgtgctcctccctccctccctcggtctggagaacctcaacacc
aaccgcaacaactccacctccctcaaccaaaccccacctccctttgcccctacccctttc
tccagctctctcaacacgccgagccccgtcccttcaataagattcagagagacacccatt
ctgcgtcgggctccacgcgcctcctccaccaccaccacaacttcctcctccgccaagtac
cagactctccctgttgaggagggagggaggagcagggcaaggaggaggaattctctcagt
gaaggaggctcaaagactcgatctaaccctaactcccatcagggaggagcagcacccaag
ttgggccgcatagtgcgtaacaaaaggagccaatcaatgagcgggatgctgctccttaaa
gatggggatggagactcggacaaagggcggtgtgattcagactggatcttagaaagcaca
gtttga
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