Hippoglossus hippoglossus (Atlantic halibut): 117755906
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Entry
117755906 CDS
T07778
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117755906 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117755906 (capn3a)
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
117755906 (capn3a)
Peptidases and inhibitors [BR:
hhip01002
]
Cysteine peptidases
Family C2: calpain family
117755906 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
117755906
NCBI-ProteinID:
XP_034431960
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All DBs
Position
22:complement(3829379..3842928)
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AA seq
716 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLNKPLRFNSQDFSVLRQECVQRKNPFEDETFPATV
ESLGFKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQEQSFSEGYAGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SLMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEECKPSQHKDSKVRLVRLRNPWGQVE
WNGPWSDNSKEWATLSKTEKEKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDNEVGCTFVVAL
MQKNRRKERKMGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFNSSKARCKSYINLREVT
QRFRLTPGEYVIVPSTYEPHQEGEFILRVFSEKKNTSEEIENRIEADHPVPAPASAGEES
EEDQQFRTIFQEIAGDDMEITANELKNVLNRVITKHKDLNTEGFSLESCRSMIALMDVSF
MDGTGRLNLQEFRHLWNKIKQWQGIFKHYNADQSGSINSYEMRNAVNDAGFRLNNQLYDI
ITMRYANESMNIDFDSFISCLVRLEAMFRAFQAFDQDGDGTIRLSVLEWLQLTMYA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgccctacacaccgtctggctttttctgcgaccggctgatccgggaacgagagaggagg
gacggggaaggttctctgaacaagccgctgcgcttcaacagccaggacttcagcgtcctg
agacaggagtgcgttcagaggaagaaccctttcgaggatgagaccttcccggccaccgtg
gagtccctgggcttcaaagagctcggacacaagtccaacaaggtcaagaacatcgtctgg
aagaggcccaaggaaatctgcgagaaccctcagttcattgtcggaggcgccagtaggacg
gacatctgccagggagatctgggtgactgctggttgctggcggccatcgcctgtctcacc
ctgaacgagaagcttctgtatcgtgttgttcctcaggagcaaagcttctctgagggctac
gccggcatcttccacttccagttctggcgctatggcgactgggtcgatgtcgtcattgac
gaccgcatcccgactttcaacaaccagctggtcttcactaagtcggccgagaggaacgag
ttctggagcgcgctgctggagaaggcctacgccaaacttcacggctcctacgaggccctg
aagggtggaaacaccaccgaggccatggaggacttcaccgggggagtcacggagttctac
gagatgaaggaagctcctaaagagctctacaagatcatgaagaaagctctggagagaggc
tcgctgatgggctgctccatcgattccctggttcccgctcgctttgagactcggactgtg
acgggacttgtgaagggtcacgcctactctgtgacggcggtggaggagtgtaaaccgtct
cagcacaaggactctaaagtccgtctggtgcgtctcaggaacccgtggggccaagtggag
tggaacggcccctggagtgacaactctaaggagtgggccacactgtctaagactgagaaa
gagaagctgcagcaccagagcgctgaggatggagagttctggatgtcattcgaggatttc
aagaagaactacaccaagattgagatttgcaacctcacccctgatgccctggaggacgat
aagatccacaagtggacggtgtctgtgaacgagggtcgctgggtgagaggctgctccgcc
ggaggctgcaggaactatccagacactttctggaccaaccctcagtaccgcctgcgtctg
ctggaggaggacgacgatcccgaggacaacgaggtgggctgcaccttcgtggtggccctg
atgcagaagaacaggcggaaagagcgcaagatgggcgccaacctcttcaccatcggattc
gccatttatgaggtgccaaaggagatgcatggcaacaagcagcacatgcagaaggacttc
ttcctcttcaactcctccaaggcccgctgcaagtcctacatcaacctgcgcgaggtgacc
cagcgcttccgcctaacccccggggagtacgtcatcgtgccctccacgtacgagccgcac
caggagggcgagttcatcctgcgggtcttctccgagaagaagaacacctcagaggagata
gagaacaggatcgaggctgaccatccagtgccggcaccggcctcggcgggggaggagagc
gaggaggatcagcagttccggactatttttcaggagatagctggagatgacatggaaata
acagccaacgaactgaaaaacgttctcaacagagtgatcaccaaacataaggacctgaac
acagaaggcttcagcctggagagctgcaggagcatgattgctctgatggacgtatccttt
atggacgggaccggtagactcaacctgcaggagttcagacatctgtggaataagatcaaa
cagtggcagggaatctttaaacattacaacgctgatcagtccggcagcatcaacagttac
gagatgaggaacgccgtcaacgacgcaggcttccgtctcaacaaccagctgtacgacatc
atcaccatgcgctacgccaacgagagcatgaacatcgacttcgacagcttcatcagctgc
ctggtgcggctcgaggccatgttcagggcgtttcaggcctttgaccaggacggagatgga
accatcagactcagtgtgctggagtggctccagttgaccatgtacgcctag
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