Hippoglossus hippoglossus (Atlantic halibut): 117756023
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Entry
117756023 CDS
T07778
Symbol
grin3ba
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04020
Calcium signaling pathway
hhip04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117756023 (grin3ba)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117756023 (grin3ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117756023 (grin3ba)
Ion channels [BR:
hhip04040
]
Ligand-gated channels
Glutamate (ionotropic)
117756023 (grin3ba)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117756023
NCBI-ProteinID:
XP_034432192
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Position
22:complement(6018092..6100165)
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AA seq
1335 aa
AA seq
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MVSLPGLWTYCLAPGRPHLLFLCAGALLLLHALAVLSSPEPCLPHPQPCHILARIGHTVR
LGALLPTRQPVRIQNALNRALASLRHQSGAADSSTTTSQTPPLLPYNLSLEMVARSPAGG
DPESLSRSACQDLVVRGVSAVLAFPRSKEELIQVEFLSSFLEIPFISILEDTEPLVTKNR
FHLQMSARVPPSTLGSLLLAVLQGGEEDRDRGRRGEGSWGGAAVICPGWEEGGDGLLSHL
QRHSGSTWHLWDIINLTRITGGGERRGEASEERREDQMEEEALKILSARFLRSPSPISSV
LLLGSDPECLSSVLRAAQRLAPSLPALQWIMGYPLSPDSLHTLGGPLGLLAYGEVGRKPI
SFYIRDALQLIGRAVTAATLVRPDLALIQNMVNCYDIANRHEAPSSGQYIARFLSNTSFT
GATGLIQVDAGLSRILSSQLFHVWSLKRGALGQPAWVTVGQWTRGRLELEGGILGLVGGF
GGSQGQGLGAGVRGGDGQGDGYNGGRWRPGLSIERHRLRVVTLVEHPFVFTREVDEDGLC
PAGQLCLDPRTNRSDIIHSLFNQLHNPNASATDWEGNELPEDLRKCCYGYCIDLLEKLAE
DMGFTFDLYIVGDGKYGALSGTGRWTGLVGDLLGGTADMAVSSFSINSARSRVIDFTSPF
YSTSLGILVRSQDSAAPIGAFMWPLHWSMWVGIFVTLHLTALFLTLYEWNSPFGMTPHGR
NRLRVFSYSSALNLCYAILFGRTVATKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVM
VGEKTFEQVSGIHDDKLHHPSMGFRFGTVRESSAEDYMKKSFPEMHDYMRRYNQPTTPEG
VHMLKTDPPTLDAFIMDKALLDFEVSIDADCKLLTVGKPFAIEGYGIGLPQGSPLTRNVS
EFVSRYKSDGFMDMLHDKWYKVVPCGKRVFAVTETLQMGIQHFSGLFVLLCMGVGGALLT
LAGEHTFYHLVIPRLRRTHTLQYWLHTSQKIHRALHTTYEDVGKELTGHDQNPSSCISEN
CTLHRKHHQPPPPSPPTSLPASTTPGDTSNSSPSHEPKEKRVHFDLETLHSYRLRTHTAS
VRGRPGMVGRPGLGLGGLGLGHLGGFGSPPQISLHVNGGPVSSLASTGLVLSPLGSRPGQ
TSLWEGELQELQGKIEIFRTQLREALARRAEIQTSLDRERSGLVRRDTSLEREKDRQRIQ
TINTDRSSSTQSKLPERDRTSQLQTLNNQTGRANQSAGPGTLEHGRSSQLNTVNSLERGR
PNQLRSVNTLTGERTVQSRTSTSLERSRVNQPGAGNVAVQSRNTSSLDRQKANLSRTMNT
LERTKANQSSVSSGT
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctctccctggactctggacctactgcctcgcccccgggagaccccatctcctc
ttcctctgcgccggagcgctcctgctgcttcacgcactggccgtgctctcctccccggag
ccctgcctcccgcacccgcagccttgccacatcctcgcccggataggacacaccgtgcgc
ctcggtgcgctcttgccgacgcgccagccggtacggatacaaaacgcgctcaaccgcgcc
ctggcgagcctccggcaccagagcggagcggcggactcctccaccaccacttcccaaacg
ccccccctgctgccctacaacctgagcctggagatggtggctcggtcgcccgccggaggg
gacccggagtcgctgtcccgtagcgcctgccaggacctggtggtcaggggggtgtccgcc
gtgctcgccttcccccgctccaaggaggagctgatccaggtggagttcctctcctctttt
ctggagatccccttcatctccatcctggaggacacagaacctctcgtgaccaagaaccga
ttccacctgcagatgtcggccagagtgcccccatcaaccctgggcagcctgctgctggcg
gtcctgcagggcggagaggaagacagagacagaggacgtcggggcgaagggagctgggga
ggagcagctgtgatctgccctggttgggaggaagggggcgacgggctgctctctcacctc
cagaggcacagcggctccacctggcatttgtgggacatcatcaacctgacccgcatcaca
gggggtggagagaggagaggggaggccagcgaggagaggagggaggatcagatggaggaa
gaggctttgaagattctctctgctcgtttcctgcgctccccctctcctatctcctcggtt
ctcctcctgggctctgaccccgagtgtctctcctctgtcctgcgggccgcccagcgcctc
gctccatcactaccagcactgcagtggatcatgggataccccttgtctccagattcgctg
cacactctaggaggccccctcgggctgctagcctatggggaggtcggccgcaagccaatc
agtttctacattcgggacgccttgcagttgattggcagagccgtcaccgcggcgaccctg
gtgagaccggacttggcactgatccagaacatggtgaactgttacgacatagcaaaccgc
catgaagcgccctcttcaggacaatacatagccagatttctctccaacacctccttcacc
ggagccacaggcctgatccaggtggacgccggcctctctcggatcctctcctcgcagctg
ttccatgtgtggagtctgaagaggggcgccctgggccagcccgcctgggttactgtcggc
cagtggaccagaggccgactggagttagagggagggatccttgggcttgtgggggggttc
gggggcagccaaggacaaggtcttggggcaggggtgaggggaggggacggccagggggac
ggctacaatggaggccgctggaggccgggactttccatcgagagacaccgcctgcgtgtg
gtaaccctggtggagcaccctttcgttttcacacgggaggtggatgaggatggattgtgt
ccagctggtcagctctgtctggaccccagaaccaaccggtctgacataatccacagcctc
ttcaaccagctgcacaacccgaacgcttccgccacagactgggagggcaacgaactaccg
gaggacctgaggaagtgctgctacggctactgcattgacttgttggagaaactggcagaa
gacatgggctttaccttcgacctctatatcgtgggcgatgggaagtacggggcgctcagc
gggacgggacgctggacggggctggtcggggacctgctgggcgggacggctgatatggct
gtcagctctttctccatcaattctgcgaggagccgagtcatcgatttcacttcgcccttc
tactccaccagcctgggcatcctggttcgaagccaggactccgcggcccccatcggagcc
ttcatgtggcctctccactggtccatgtgggtgggcatcttcgtcacgctgcatctcacc
gcgctcttcctcaccttgtacgagtggaacagccccttcggcatgacgccccatggcagg
aaccggctgcgcgtgttctcctactcctccgccctcaatctctgctatgccatactgttt
ggacgcactgtcgccaccaagactcctaaatgctggacaggccgcttcctgatgaacctg
tgggccatcttctgcttactggtgctgtccagctacaccgccaacctcgccgccgtcatg
gtcggggagaagaccttcgagcaggtctcgggaatccacgacgacaagctgcaccatccc
tccatgggctttcgtttcggcacggtgagggagagcagcgctgaggattacatgaagaag
agtttcccggagatgcacgactacatgagacgctacaaccagcccaccacgccggaaggt
gtacacatgttaaagacagatcctccgaccctggatgcgttcatcatggacaaagccctg
ctggacttcgaggtgtcgatcgacgccgactgcaaactgctcaccgtggggaagccgttt
gccatcgaaggctacggcatcggcctgccccagggctcccccctgacccgtaatgtgtcg
gagtttgtgagtcgctacaagtctgacggattcatggacatgctgcatgacaaatggtat
aaggtcgtgccctgcgggaagagagtctttgccgtcaccgagactctacagatggggatc
cagcatttttccggcctgtttgtgctgctgtgtatgggggtgggtggagccctgctgacg
ctggccggcgagcacaccttctatcacctggtcatccctcgcctccgccgcacacacaca
ctgcagtactggctgcacaccagccagaagattcaccgagccctccacaccacgtacgag
gatgtagggaaggagctgactggccacgaccaaaacccgtcctcttgcatctccgagaac
tgcacccttcaccggaaacaccatcagcctcctcccccatctccccccacatccctccct
gcttccaccacacccggagacaccagcaactcctcgccatcccacgagccaaaggagaag
cgtgtgcacttcgacctcgagaccctgcacagctaccgcctgcgcacgcacacagcctcg
gtgcgcggcaggcccgggatggtcggccgccccgggctcggcctgggagggctggggctg
ggccacctcgggggttttgggtccccgccacagattagcctccacgtcaacgggggcccc
gtctcatcactggcgtccacaggcctggttctctcgcccctgggcagcaggcccggtcag
accagcctgtgggagggggagctccaggagctgcaggggaagatcgagatattccgcacc
cagctgagggaggctctggccaggagagcagaaatccagaccagcctggatcgagagagg
agcggactggtgcgcagggacaccagtctggagagggagaaggacagacagaggatacaa
actattaacacagacagaagtagcagcactcagtcaaaactcccggagagagacaggacc
agccaactgcagaccctgaataatcaaacaggaagggccaaccaatcagcggggcccggg
actctggagcacgggaggagcagccaattgaacacagttaacagtttggaaagagggaga
cccaaccagttgcgctccgttaacactttgacgggagaaaggactgtccagtcacgcacc
tccaccagtttggagcgaagtcgagtcaaccaaccaggtgcaggaaacgtagctgtccaa
tcacggaacacttccagcctggacaggcagaaggctaacctatcacgcactatgaacact
ttggagaggacaaaagccaaccaatccagtgtgagcagtggaacttga
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