Hippoglossus hippoglossus (Atlantic halibut): 117756149
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Entry
117756149 CDS
T07778
Symbol
pcare1
Name
(RefSeq) photoreceptor cilium actin regulator
KO
K24165
photoreceptor cilium actin regulator
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hhip03037
]
117756149 (pcare1)
04812 Cytoskeleton proteins [BR:
hhip04812
]
117756149 (pcare1)
Cilium and associated proteins [BR:
hhip03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117756149 (pcare1)
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
117756149 (pcare1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
Motif
Other DBs
NCBI-GeneID:
117756149
NCBI-ProteinID:
XP_034432397
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Position
22:21564768..21570044
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AA seq
1164 aa
AA seq
DB search
MGCSPSKGNNFGTLGSLRRSRMLLAAPQESPRQSLLEDGNLRNSAIPTDVDTKEWKTTGQ
TQVFQKEAHMTPQKKRSVTDFAPEAVNMDKLGSQGMDNNTVSHRKEKNNDTQDVIEKKTG
RKPKKNRGGKVLKKKDKDKLPAENKVDFPEPLVKAHQAAYAFLNPSINKYDVLLGLLEQA
TQTQVSVQPMVAFMALRYEEIIQGLEEVADEGEKVLKENGQHLAWTSQMKNLSSSPPLKS
GSANSEPPPDLLQQLLQYTTQRMRNVSQTVGGIGDSALEEAVEYFASVSELLEEKLKVKR
TVETRLMQLLSRIEMASLRKPGPEDSALLSEDSGIGAESESLAGSDRRHRRESCESTGTN
RTTPVSLIGHTYINITQGVSRQKCLSQISPSVSLTSLNSLDSTCTIMANDRRDSLLGSVS
LDDGEEDENDDDEEVEKGMGVVHVRFRTRSNSSPVEPEQHPRRLLPKRIENPQNVEMTLK
MKNAISGRIQFVPSQNAGAKSKVAGSPKTSRRHWTDEEERSPRRPQSAAPVRKALVKKTT
VPRQQRSRSAESLRSKGEDPTLLELERTQKDLNQRLQRMSKSKTGVNARTAPSKQNQGSS
PAQSPAINRKLQSLEKNSNTQPLKGKVDLIRSNNKKTSGTSVVEDNIQKNKKLHKGPIKA
TPPPSPPSSPRPSSGLHRGRNSVKKLIDTFTQGIEELDSPKVLGPLVGVRKCGVPVLPGL
GNMEAVLSAGLARCRHEYISSEKTDDLDLDSLPPPPLEVLMDNSFEGAKNLTTGKADDGA
TKVGKSPLLKRTVVSQKLRASVQSVTVLPSKGGLPQASKVVSHARADQQDTSTPSNFSKQ
VAQLEADPGKENDAFHHQARKIIPLRHSSNSQIERSSTSYLENNPPSSQEGLVDFQDAGN
LSVPGPNTTVSTLPPSSVVNSQPPSTPTKSRSRMLPSTPSTPNSLYRRFPSPHNCKRQPT
PPTSTSPPVNRELSTSPAVQRRLPSPPVTRKNILNSNSTSSYPFKAPSPPASPKLKRWSR
ENSSEDSSSARMISNARSVFCPVSPSLFEASIPRPPQAWISTGVSFVSRPSGNRGRFPVC
VQGPRPFIRRSHSDQRPSLSLPPRSPGVSVAETCGSEPAICTQGLDDEPIRYADLWGSQS
DLGATPRSASHPDLCVVGQAFHRD
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgggctgctcaccatccaaaggtaacaattttgggactctgggttccctgaggaggagc
agaatgctgctggctgcacctcaagaaagccccagacagtccctgcttgaagacggaaat
cttcgaaattcagctatacctacagatgtggatacaaaggagtggaagacaactggacag
acccaggtatttcagaaggaggcacatatgacaccacaaaaaaagagatctgttactgac
tttgcaccagaggcagtaaacatggataaactggggagtcaaggaatggacaacaacact
gtgtcccacagaaaagagaaaaacaatgacacgcaggatgtaatcgagaaaaagactggc
agaaaaccaaagaaaaacaggggtgggaaagttcttaaaaagaaagacaaagacaagcta
cctgcagagaataaagtggacttcccagaacctctggtaaaagctcaccaagctgcttat
gcctttttaaatccaagtataaacaagtatgatgttctgcttggacttttggaacaagca
acccaaactcaggtttctgtgcagcctatggttgcttttatggccctacgctacgaggaa
ataattcagggcctggaagaggtagcagatgagggagaaaaagttttaaaagaaaatgga
caacatcttgcttggacaagtcaaatgaaaaatctttcatcttctccacctctgaagtct
ggctctgctaatagtgagcccccaccggatttgttgcagcagctgcttcagtacaccaca
cagagaatgcgaaatgtgagccagactgttggtggaatcggggattctgctttggaggag
gcagtggagtactttgcctcagtttcagagcttttagaggagaaactgaaagtcaaacgt
acagtagagactaggctaatgcaactcttatctcgtattgaaatggcctctctgcgcaag
cctgggccagaggactctgctctgctgagtgaggacagtggcattggggctgagagtgaa
tcgcttgctggatctgatcgacgccatagacgagagagttgtgagtccactggaacaaat
agaactacacctgttagtcttatcggacacacctacattaacattacacaaggagtgtca
aggcaaaagtgtctaagtcaaataagtccaagtgtttccctcacctcactcaactcactc
gattctacatgcaccataatggctaatgaccgaagagattcattactaggatcagtctct
ttagatgatggggaggaagatgaaaatgatgatgacgaggaagtggagaaaggcatggga
gtagttcatgtaaggtttagaacgcgatcaaattcttcaccggtagaaccagaacagcac
ccccgtcgcctactcccaaagcgcatagagaatcctcaaaatgtagaaatgactctcaaa
atgaaaaatgctataagtggtaggatacagtttgtcccatcacagaatgctggtgccaaa
tcaaaggtagcaggcagtcccaaaaccagtagacgccattggacagatgaggaggaacga
tctccaaggaggcctcaatcagcagcacctgttcggaaggcattagtaaaaaagaccaca
gtgcctagacagcaacgttcccggtcagcagaatccctacggagcaaaggtgaagatcct
actctgctcgaactagaaaggactcagaaggatttaaaccagaggttgcagaggatgagt
aaaagcaaaacaggagtaaacgcaaggacagctccatctaagcaaaatcaaggaagctca
ccagcacagtcgccagcaataaatcgcaaactgcaatccttagaaaagaacagcaatacc
caaccacttaaaggcaaagtggacttaataaggagcaacaataaaaaaacgtcaggaacc
agtgttgtggaagacaatatacaaaagaacaaaaaactacacaagggtcccataaaagcc
accccaccccctagccctccttcatcaccacggccatcatcaggacttcacagaggcagg
aattcagtcaaaaaactgattgatacctttactcaaggaatagaggaacttgatagtcct
aaagttctagggcctctcgtaggagtacgaaagtgtggtgttcctgtgttacctggttta
ggaaatatggaagccgtgctaagtgctgggttagctagatgtaggcatgaatacatctca
tctgagaaaactgatgatttagatctggatagtcttcccccgcctccactggaagtatta
atggacaattcctttgagggtgccaagaatcttacaactggtaaagcagatgatggggca
acaaaagttggcaagtcgcctctgttaaaaaggactgttgtatcacaaaaattaagggcc
tcagttcagtcagtgacagtgctgccaagcaaaggaggcttgccacaagcttcaaaggtt
gtttctcatgctagagcagaccaacaggacacgtctactccatcaaactttagcaaacaa
gttgcccaactggaggcagacccaggaaaagaaaatgatgcttttcaccatcaagcaaga
aagattatacccctaagacactcttcaaactctcagatagagagatcatcaacaagttat
ctagaaaacaatccaccttccagtcaagaaggattagtagactttcaagatgctggcaac
ctatccgtgcctggacccaacactacagtgtccacattgcctccctcttcagtagtcaat
agccaaccaccttccaccccaactaagtctaggagtcgaatgttaccatccacaccttct
acgccaaacagcttatatcgaaggtttcctagtccccataactgtaaaaggcaacctact
ccaccaacttcaactagccccccagttaatagggaactctccacatcgccagcagttcag
aggaggctccccagcccacctgttacaaggaagaacatcttaaactcaaactcaacctcc
tcgtaccctttcaaagcaccatctccacctgcctcaccaaaattaaaaagatggtcaaga
gagaacagcagtgaagactcatctagtgctcggatgatcagtaatgctcgttcagtcttc
tgccctgtgtccccatccctgtttgaagcctccattccccgaccccctcaagcatggatc
tctaccggggtgtcttttgtctcacgtccttcgggaaatcgtggaaggtttcctgtatgt
gttcaaggacctcgaccattcatcagacgtagtcattcagaccaaaggccaagtctaagt
ttaccaccaagatcaccaggtgtctctgtggctgagacttgtgggagtgagccagcaata
tgcacacaggggctggacgatgaaccaatcaggtacgctgacttatggggcagccaatca
gacctcggagctacaccacgctctgcatcacacccggatctgtgtgttgttggtcaggcc
tttcacagagactaa
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