Hippoglossus hippoglossus (Atlantic halibut): 117756184
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Entry
117756184 CDS
T07778
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04141
Protein processing in endoplasmic reticulum
hhip04210
Apoptosis
hhip04217
Necroptosis
hhip04218
Cellular senescence
hhip04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117756184
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117756184
04217 Necroptosis
117756184
04218 Cellular senescence
117756184
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117756184
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117756184
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
117756184
Peptidases and inhibitors [BR:
hhip01002
]
Cysteine peptidases
Family C2: calpain family
117756184
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
CAPN13-like_C_EFh
Na_Ca_ex_C
Motif
Other DBs
NCBI-GeneID:
117756184
NCBI-ProteinID:
XP_034432468
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Position
22:complement(22518231..22535442)
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AA seq
699 aa
AA seq
DB search
MPTSGVCMNIINARHQKSGYGTITNPISFLNQDYEQMKQYCLSRRVRYIDEMFPPDSNTI
GQGLLKPTDLDRVVWLRPGKIVSNPSFVVDGVSRFDFGQGLLGNCWFLASIGALTFQNSI
LKQVVPLEQSFNEDYCGLFHFRFWRFGKWVDIIIDDKLPTVDGRLIFVQSKTPTEFWPAL
LEKAYAKVCGSYADMNAGTPAEAMVDFTGGVHMCVNLTEPPPDLWELMTRAGQNISLMGC
GTPLGKTSANNVLPNGLVQGHAYTVTGVKQFMSQGRLVNLVRLWNPWGKTEWKGEWSDHS
PLWQTVSPQDREMCLSVRDDGEFWMTLENFCKLYEDLDICCLCPDFLDGSSSCHWKSSFY
EGRWVAGTTAGGSTENYEKFSTNPQYRIKVGKLFSECSENQGERNFLMSLMQMPDKRNRR
LVQNLHIGLHVFEVTKEYKAHKGRFPASFFGRNKAVAQTKNYLDAREVMEFVMLKPGEYL
IVPSTYHPNETASFILTILSTAETQVHEDSGGHNHEHNKTEEKTPDENVVDDQNKRKFFR
QYSDKYEEVDAEMLQTILNDQILKGDLKSGGFSIDACRSMISLMDTSITGKLNGEEFLRL
WKKVIVYKDIFSQKDVSLTGTLSLNELRNAVMASGKRVSDDMLNLMALRYGASSGHMTLE
SFISLILRFDCMSQVFKQLSDGTAMTLGESEWMYLSMYT
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcctacctctggtgtgtgtatgaacatcatcaatgcacggcatcagaaaagtggctat
gggaccatcaccaaccccattagcttcctcaaccaagactacgagcagatgaaacagtac
tgcctcagccgacgagtaaggtacattgatgagatgttcccccctgacagtaacaccatc
ggccaagggttactgaaacctactgacctggaccgtgtggtgtggctgagaccagggaaa
atagtttccaatccatcttttgttgttgatggggtctccagatttgactttggtcaaggc
ctgcttggaaactgctggttccttgcatctatcggagctctgacattccagaattcaata
ctaaagcaagttgttcctcttgaacaaagttttaatgaggactactgcgggctgttccac
ttcaggttttggaggtttgggaaatgggtggatattatcattgatgacaagctaccaaca
gttgatggcagattaatcttcgtccaatccaaaaccccgactgagttctggcctgctttg
ctggagaaagcctatgccaaggtgtgtggttcatacgcagacatgaatgctggaactcct
gctgaggctatggtggacttcactggtggtgtccacatgtgcgttaacctcacagaacct
cctccggacctgtgggagctgatgacaagagctggacaaaatatttccctgatgggctgt
gggactcctctggggaagacatctgccaacaatgtgttgccaaatggattggtccaaggc
catgcctatactgtcacaggtgtgaaacagtttatgagccaagggagactcgtgaacctg
gtgcgtttgtggaacccctggggcaaaacagaatggaaaggagagtggagcgatcattcg
cctttgtggcaaactgtgagtcctcaggatcgtgaaatgtgcctttcagtgagagatgat
ggagagttttggatgacactggaaaacttctgtaagctctacgaggatcttgacatctgc
tgcctgtgtccagacttccttgatggaagctcctcatgccattggaagtcgtcattctat
gagggcagatgggttgcaggaaccacggctggaggatccacggagaactatgaaaaattc
tccactaatccacagtatcggatcaaggtcggcaaattattcagtgaatgttcagagaac
cagggggaaagaaactttctgatgtctctcatgcaaatgcccgacaaaaggaacagacgc
ttggtccaaaatctccacattggactccacgtatttgaggtgaccaaagaatacaaggca
cacaaagggaggttcccagcctctttcttcggcagaaacaaagctgtggcccaaactaaa
aactacttggacgcacgtgaggtgatggagttcgtcatgttgaagcctggtgaatacctg
attgtgccgtccacctaccatcccaatgagacggcctccttcatcctgaccatcctgtcc
acggccgagactcaagtgcatgaggattctggaggccataaccacgaacacaacaaaaca
gaagagaaaacaccagacgaaaatgtagtggatgaccaaaataagagaaagtttttccgt
caatactctgacaagtatgaagaagtggacgctgagatgctccagacgattctaaatgac
caaatcttgaaaggagatttgaaatctggaggcttcagcatcgatgcctgtcgcagcatg
atttctctgatggatacgtctatcacgggcaaactgaatggtgaggaattcctgcgtctg
tggaagaaggtcatcgtgtacaaggacattttctcccaaaaagacgtttcacttacagga
acactgtctctgaatgagctcaggaatgctgtcatggcctcaggaaagcgtgtcagcgat
gacatgctgaatttgatggctctgcgctacggtgcctcctctggacacatgacactggag
agtttcatcagtctcatccttcgcttcgactgcatgtcccaagtcttcaagcagctgtct
gatggaacggccatgactcttggtgaatcagagtggatgtacctttccatgtacacttaa
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