Hippoglossus hippoglossus (Atlantic halibut): 117756328
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Entry
117756328 CDS
T07778
Symbol
alms1
Name
(RefSeq) uncharacterized protein alms1
KO
K16741
alstrom syndrome protein 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117756328 (alms1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hhip03037
]
117756328 (alms1)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
117756328 (alms1)
Cilium and associated proteins [BR:
hhip03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117756328 (alms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
117756328
NCBI-ProteinID:
XP_034432635
LinkDB
All DBs
Position
22:3655717..3669296
Genome browser
AA seq
2260 aa
AA seq
DB search
MNAEPPERVEASLQLPVDKDGSRSVGQSSMNQQGPRSLPAAGQDQWQPRRETDDWEPLQP
SGRSLQLEFQDSNLSPALFLLPGNSRVERNFTEYSLFQQSDHEFAPLRAYPDMSMASERF
HLPPQDRTTQASERGSLSQHPLAHATILSEEGTSSCCSLSQHSMPPGDESRREEMIHSRL
TDLQASRDDGGGREKDSETLTDLKNKLAAVDDDTFFLSKDIPAQHLLDILQKEVGMLSSS
SSALSSSSEMSVKSITSFVQESKSSKISKPGIPQSLARREGPPGEASLPQQQTQQPDPSQ
TLSSEVGNITMGSRSTQPDDSSEVLYRELLSEAEGNRSREAGAKNQQQKSASPPAQFLTE
TSTGKPSVTRKNLSDLPWTGPFSSGVERLHREQDLWSSGNQTGIDGSYLGFLPQSQSTPG
VFKAPPKSNIKATLGKLSAIESDKESSYQSRTGISPQPAVPEPDVHRPDSADQCHEEHTS
AKVQSLPSLNYIQKVDAWRTNQSSGNTSLFDSLALQGFSGVSPKKKAYEAVSDSLNRILS
EQVRRLQQPPVSSALNENVTQESSAAPSGSSSPRRGEAVGSAPSDKDNTGSAARPSSSPF
GRSQSHSSLSTVVMSAQKEKNETQDDVHHHLHQPSASAQPSPLVNLGQFSDVSVDRDFTL
SSSQDSYNSGVKLGTSIGASSVTSLEVDNYAPYWTSKLSSTSPLPGPREFNIEERIPLYL
HNLGIDQSPSTILNPFAPRGPIREPEFSPTDLCTIKGSIGTPSKSTQPSEGGSPYKGEFS
RSSIRSVDSSISIPFSMDSLGPAVSIPEPTKRASPPSDAEAVQTERRLTPASQREEDSHS
STLHLSQQQQQQQKDDTLTSSQNIFLPGERFDSDLSSVTQARSEERDLASPLQTSRSLEK
SAEDSFVSSKALLEINKLLSQSDKGVSAGSSSASPAAPRLLPDDDLFLSFKRKTSKLQDS
SFSGAEDPRTRSSSLWARSSSDSMLTSEKPRQSSLGRESMTSSWQPDYPSTQSLTTAPAA
GSTLVLSKPARRAEPEGCSAAPPDNKVPTQPPVIQSPPAVNPQQLISTSTETAAALEVEE
EPAPGGPAQSSSSSPAPDDTDQGGMSDGSSESSLAVRVAKLLQSESPATMMSSTPSMTDQ
EESKAREWIKLKVSGQQCEPLELDIEDRRRIEEIKKELLLKYPMKSQLSTDTESSAASSV
QRGQDPPQSAETFTPNQLSQPLQGLRTNLSDSSVQLRDPRRQDTLEAQVQKIAAREGVTL
PRTNPRALTSISIATCRRSTSPSPSTSPAHPISPASEPLHTSELWTADEHLKVNRPPTQN
EEKTTRELTSRFEPSSRLYTRKQSLDSQLMSGNQTRQDAVGGQFENPPPPLQILNREDQR
DDLFIWDSSVSGAHGAERTTGSSPSESPATAGHVSHVHLTLSPKAADPSLASALSSSRAG
AATEMPRREFVLLRHSPSTASSPDEGVGLSSPPEWYETGEPREQRGLERADTSTRFKSVV
PRRRITSAPKQAFTPRPRAEVSKRPLTHESAAVPVLLPYKPRGSEELFYVPQLEADVSST
GHSDTTMESSHTGSDDAVAPRFSSEVLGHQDPGLDRGVTIRHTEGIYSKRLRTANFKMQQ
PGHRDSSVTANKSSQTSANRTSRPSSQVSPALSRLSSSNNPEAPKRDQGTSPMPFTRHHQ
PETNRETVQPVHMDLRCRTSHHLDQSSVPQTGGHQHTRDVAPPASPQSNIGLDELWQRFC
DRWTIEQSRPTSDQEASLLQRLERLSRLIHSRRRTNVSELQEENQKLGRRREDATREEKR
HSNREDDGSLHEETKPPVPHQAQRTSQPAAENSRTTFSSSLSHSSSQSLTLSPADRDASE
SLSTVSGSMSSVDTARLVRVFGAHRVKHLKSGSSLGKLYNTINKQKEGREQRRERHGDHP
HLITPLETTGESPVPLETTGTDESSVAADSASSTSTYTPPSHHGPSNTLAAKKTVKLLSK
GIQTAGDLEIVRNATRRHTRDVGTTFPSPHETRASRQISSSSPSGERGRGGQKNPSKIQS
SQKQRKSKRSPSKLYPAGVSWFISADDLRSEARKENQQQAEESARRPSTAWFEPHGRTQP
WREPLRQRQVHEDRTIHHTEPDPRTKTTSSGLTRVSLQEALELWRPGFICRSTQRVKCLA
LQAEERKLQAVFIRERDELFSQPRGGGGPPRPAGTALLRRAVPRKEMIQRSKLIYENLPE
VQRRKEEERRKAEYRSYRLNAQLYNKRITTRVLSRRTAWQ
NT seq
6783 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggagcctccggagagagtggaggcatctcttcagctgccggtggataaagat
gggagtcggtctgttggacaatcctccatgaatcagcagggacctcgaagtcttcctgca
gccggacaggaccagtggcagcccagacgggaaacagatgattgggagcctctacagccc
agtggacgctctttgcagctggaatttcaggacagtaacttgtctccagctcttttcctc
ttgcctggaaactctcgagtggaacgcaactttactgaatattctttattccaacaaagt
gaccatgaatttgctcctttaagggcgtaccctgacatgtccatggcgtcggagagattc
cacttgccgccccaggatcgcaccactcaggcgtctgagcgtggctcactgtcccagcac
cctttggcccatgcaaccatcctttctgaagaaggaacaagcagctgttgctctctgtcc
cagcacagtatgccaccaggggacgaaagcagacgagaggaaatgattcactcccgactg
actgacctgcaggcatctagagatgatggtggtggcagagagaaagactctgagacacta
actgaccttaagaacaagctcgcagctgtagacgatgacaccttctttctgagtaaggac
atccctgcccagcatcttctggacatccttcagaaagaggttggcatgctgagcagcagt
agtagtgcgctgtcctcttcctctgagatgtctgtgaagagcattacatcttttgtccaa
gagtctaaaagctcgaaaatttccaaaccaggaattccccaaagcttggctagaagagaa
ggtccacctggtgaagcttctctgccccagcagcagacgcagcaacctgacccgtcacaa
acgctgtcatctgaggtcggtaacatcaccatgggttcccgcagcactcaacctgatgac
agcagtgaagtgttgtacagggagctgctgtctgaggctgaggggaaccgcagcagagaa
gctggagctaaaaaccaacagcagaaaagtgcttcaccacctgctcagtttcttacagag
acatccactggcaagccaagtgtgacccgaaaaaatctgagtgacctgccatggaccggg
ccgttttcatccggtgtggaaaggctgcacagagagcaagacctctggtcctcagggaac
caaacagggatcgatgggtcctacctgggtttccttccacagtctcagtccactccaggg
gttttcaaggccccacccaaatccaacatcaaggctacattagggaaactgtctgccata
gaatctgataaagaaagctcgtatcaatcgaggactgggatctctccacagccagctgtt
cctgagcctgacgtccatcgtccagactcagcagatcagtgccacgaggaacatacctct
gcaaaagtccagtctcttccaagtcttaactacattcagaaggtagacgcttggaggacg
aatcagagctctggcaacacgtcactgtttgacagtctggcactgcagggattttctggc
gtctctcctaaaaagaaagcttacgaggcagtgtctgactccctgaatcgcatcctcagt
gagcaggtgcggagattacagcagcctcctgtttccagtgctctcaacgagaatgtcaca
caggaatcctcagcagctccttctggctcctcctctccgagaagaggggaggcggtgggc
agcgcgcccagtgacaaagataacactgggtctgcagcaagaccctccagctcccccttt
ggccggtcgcagtcccactcctctcttagcacagtagtaatgtcggcccagaaagaaaag
aatgagactcaggacgatgttcatcatcatcttcatcagccgagtgcctcagctcagccc
tcacctctcgtgaacctcggtcagttcagcgacgtgtcagtcgatcgagattttacactt
tcaagttcccaagatagttacaacagtggagttaaattaggaacttctatcggagcgtct
tctgtcacgagcctggaggtggataattatgccccctactggacttctaaactgtcgtca
acatcacctctgcccggacctcgagaattcaacatcgaagaacgaattccgttgtatctc
cacaacctgggtatcgaccagtctccctcaacgatattaaatccttttgcacccagaggg
ccaatcagagaacctgaattctctcccactgatctctgtacaattaaaggatcgatcgga
accccgtccaagagcacccaaccctctgaaggtggcagtccctataaaggagagttttcc
aggtctagtattcggtcggtggactctagtatttccattccgttcagcatggacagtctt
ggtccggccgtatcgatcccagagccgaccaagcgagcatctcctccatctgatgctgaa
gctgtccagactgaacgcagactgacaccagcctcccagcgtgaggaggattcccactcc
tccacattgcatctcagccagcagcagcagcagcaacagaaggacgacactctaaccagc
agtcagaatattttcctgccaggagagaggtttgactctgacctctcatcagttactcag
gcgaggagcgaggaaagagatttggcgtctcccttgcagacaagtcgtagtttggagaaa
agtgcagaggattcttttgttagctctaaggccttgttggagatcaataaactgctctct
cagtcggataaaggggtgtctgctgggtcttcctcagcctcccctgcagcgccccgtctg
ctgcctgacgatgacttattcctctccttcaagaggaaaaccagtaaactccaggactcc
tcgttctccggagctgaagaccccagaactcgttcctcctcgctgtgggccaggtcgtcg
tctgattccatgcttacctcagaaaaaccaaggcaaagctctttaggtcgagaaagcatg
acctcgtcatggcagcctgattatccgtccacacagtctctcactactgcacctgctgca
ggttcaacccttgttctctccaaaccagccagacgggcggagcctgaaggctgcagtgct
gcacctcccgacaataaagtcccaacacaaccaccagtcatccagtctccacccgctgtg
aacccacaacagctcatctctacatcgacagagacggcggctgcactcgaggtggaagaa
gagcctgcgcctggaggtcctgcacagagcagctcctcgtcgcccgctcctgacgacaca
gatcagggagggatgagcgacgggagcagcgagagctcactggcagtcagagtggccaag
ttactccagagtgagtctccagccaccatgatgtccagtacgcccagcatgactgatcaa
gaggagagcaaagccagagagtggatcaaactgaaggtgtcgggtcagcagtgcgagcct
ctggagttggacatagaagatagaagacggattgaagagatcaagaaagagctgctgtta
aaatatcccatgaagagccagttgagtacagatacagagagcagtgcagcatccagtgtc
cagaggggacaggatccacctcagtctgcagagacgttcacccccaaccagctgtctcag
cctctgcaaggcctcagaacgaacctgtctgactccagcgtgcagcttagagaccctcgt
cgccaagacactctagaagctcaagtacagaagattgctgctcgagaaggagtaaccctc
cccagaacaaaccctcgggccctcacgtccatctccatcgccacctgcaggcgctccact
tccccttctccctctacgtcgcctgcacatcccatcagcccggcctcagagccactccac
acgagcgagctctggacagcagacgaacaccttaaagtgaacagaccacccactcaaaac
gaggagaagacaaccagagagctgacatcaaggtttgaaccgagcagtcgtctctacacc
agaaagcaaagcctagattctcagttaatgtcaggaaatcagacgaggcaagatgctgtt
ggaggccagtttgaaaaccctcctccacccttgcagattttaaatagagaggatcagcga
gatgatttattcatctgggacagctctgtgtctggtgcccacggagctgaacgaaccaca
ggttcatccccctctgaatctcctgccacggccggtcacgtctcccatgtccatctcact
ctgtccccgaaagcagctgatcccagcttggcctcggctctgagctccagtcgagctggt
gcagctacagagatgccacgtagagaatttgttctcctcagacactctccatccacagcc
agcagcccggacgaaggtgtgggtctgtccagtcccccagagtggtacgagaccggagag
ccgagggaacagcgggggcttgaacgagccgacacctccacccggtttaaatctgtggtt
cctcgacgaagaatcacctccgcacccaaacaagccttcacaccacgtcccagagctgaa
gtttccaaaaggccattaacccacgaatcagcagcggtgcctgttctgttgccttacaaa
ccccgcggcagtgaggagctcttctacgtccctcagctagaagctgacgtctcctccact
gggcactcggacaccaccatggagagctcgcacacaggctcagacgacgccgtggcccca
cgcttcagcagtgaggtcctcgggcaccaggacccggggctggaccgcggcgtcaccatc
agacacacggagggcatctacagcaagaggctgagaacggctaacttcaaaatgcaacaa
cctggacacagagattcctcggtgacggcaaataaaagctctcaaacgagcgcaaaccga
acttcacgcccgtcctctcaggtgtcgccggccttgagcagattgtcttcgtcaaacaac
ccagaagccccgaagagagaccagggaaccagcccgatgccgttcactcgtcaccatcag
ccagagacgaaccgtgagacagttcagccagttcacatggacctgaggtgtaggacgagt
catcacctggaccagagctctgtccctcaaacaggaggacaccagcacacgagggacgtc
gctcccccggcctccccacagagcaacatcggtctggacgagctgtggcagaggttctgt
gatcgctggaccatcgagcagtctcgtccaaccagcgaccaagaggcgtcgctgctgcag
aggctggagcgtctgtcccgtctcattcacagcaggaggagaaccaacgtgtcggagcta
caggaggaaaatcagaagctagggaggaggagagaagacgctacgagggaagaaaagagg
cacagcaacagagaggatgatgggagtttacacgaggagacgaaacctcccgtccctcat
caggcccagcgaacatctcagcctgcagcggagaacagtcgcaccaccttctcctccagt
ctctcccacagctcctcccagagtctgaccctcagtcccgcagacagagacgcgtcagag
agcttgtccaccgtgtcgggctccatgtccagcgtggacacggcccggctggtccgagtc
ttcggcgcccacagagtcaagcacctgaaaagcggctccagcctcggtaaactttacaac
accatcaacaagcagaaagaagggagggaacagaggagagagagacacggagaccacccg
cacctcatcacgccgttagagaccaccggcgagtccccggtgccgttagagaccaccggc
accgacgagtcctcagttgctgctgattctgcgtcgtccaccagcacctacaccccccca
tcccaccacggaccctccaacactctggcagccaagaagacggtgaaactgctcagcaaa
ggcatccagacagctggtgacctggagatcgtcagaaacgcgacccggcgccacaccaga
gacgttggaacaacgttcccctcgcctcatgaaaccagagcgtcgaggcagatttcatct
tcctcacccagtggagagagaggaagaggagggcagaagaatccctctaagattcagtcc
tcacagaaacagaggaagagcaagcggagcccatcaaagctttatcctgcaggcgtctct
tggttcatctctgctgacgacctgcgctccgaggcgaggaaggagaaccagcagcaggcg
gaggagtcggcacggaggccgagcaccgcctggtttgagccgcacggcagaacccaaccg
tggagagaaccgctcagacagagacaagtccacgaggacagaaccatacaccacacggaa
cctgatcccagaaccaagacgacgtcgtctggtctcacacgcgtctctctgcaggaggcg
ctggagctgtggcgtccggggttcatctgtcggtccacgcagagggtgaagtgtctggct
ctgcaggcggaggagaggaagcttcaggccgtcttcatcagagagagagacgagctcttc
agccagcccagaggagggggggggccgccgaggcctgcaggcaccgctctgctgaggagg
gctgttcccaggaaggagatgatccagaggtccaaactgatctatgagaatctgcctgag
gtgcagaggaggaaggaggaggaacggaggaaagcagaatacagatcttaccgactgaac
gcacaactctacaacaagagaatcaccacccgtgtcctgagcagacgaacagcctggcaa
tga
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integrated database retrieval system
